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Items: 9


Impact of angiogenic activation and inhibition on miRNA profiles of human retinal endothelial cells.

Walz JM, Wecker T, Zhang PP, Cakir B, Gruening B, Agostini H, Reuer T, Ludwig F, Boneva S, Faerber L, Lange C, Schlunck GR, Stahl A.

Exp Eye Res. 2019 Apr;181:98-104. doi: 10.1016/j.exer.2019.01.006. Epub 2019 Jan 4.


Recommendations for the packaging and containerizing of bioinformatics software.

Gruening B, Sallou O, Moreno P, da Veiga Leprevost F, Ménager H, Søndergaard D, Röst H, Sachsenberg T, O'Connor B, Madeira F, Dominguez Del Angel V, Crusoe MR, Varma S, Blankenberg D, Jimenez RC; BioContainers Community, Perez-Riverol Y.

Version 2. F1000Res. 2018 Jun 14 [revised 2019 Jan 1];7. pii: ISCB Comm J-742. doi: 10.12688/f1000research.15140.2. eCollection 2018.


Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework.

Blank C, Easterly C, Gruening B, Johnson J, Kolmeder CA, Kumar P, May D, Mehta S, Mesuere B, Brown Z, Elias JE, Hervey WJ, McGowan T, Muth T, Nunn B, Rudney J, Tanca A, Griffin TJ, Jagtap PD.

Proteomes. 2018 Jan 31;6(1). pii: E7. doi: 10.3390/proteomes6010007.


RHYTHM--a server to predict the orientation of transmembrane helices in channels and membrane-coils.

Rose A, Lorenzen S, Goede A, Gruening B, Hildebrand PW.

Nucleic Acids Res. 2009 Jul;37(Web Server issue):W575-80. doi: 10.1093/nar/gkp418. Epub 2009 May 22.


SuperLooper--a prediction server for the modeling of loops in globular and membrane proteins.

Hildebrand PW, Goede A, Bauer RA, Gruening B, Ismer J, Michalsky E, Preissner R.

Nucleic Acids Res. 2009 Jul;37(Web Server issue):W571-4. doi: 10.1093/nar/gkp338. Epub 2009 May 8.


SuperToxic: a comprehensive database of toxic compounds.

Schmidt U, Struck S, Gruening B, Hossbach J, Jaeger IS, Parol R, Lindequist U, Teuscher E, Preissner R.

Nucleic Acids Res. 2009 Jan;37(Database issue):D295-9. doi: 10.1093/nar/gkn850. Epub 2008 Nov 12.


Voronoia: analyzing packing in protein structures.

Rother K, Hildebrand PW, Goede A, Gruening B, Preissner R.

Nucleic Acids Res. 2009 Jan;37(Database issue):D393-5. doi: 10.1093/nar/gkn769. Epub 2008 Oct 23.


SuperScent--a database of flavors and scents.

Dunkel M, Schmidt U, Struck S, Berger L, Gruening B, Hossbach J, Jaeger IS, Effmert U, Piechulla B, Eriksson R, Knudsen J, Preissner R.

Nucleic Acids Res. 2009 Jan;37(Database issue):D291-4. doi: 10.1093/nar/gkn695. Epub 2008 Oct 17.


Toxicity versus potency: elucidation of toxicity properties discriminating between toxins, drugs, and natural compounds.

Struck S, Schmidt U, Gruening B, Jaeger IS, Hossbach J, Preissner R.

Genome Inform. 2008;20:231-42.

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