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Items: 35

1.

Draft genome sequence data and analysis of Shinella sp. strain JR1-6 isolated from nitrate- and radionuclide-contaminated groundwater in Russia.

Grouzdev DS, Babich TL, Sokolova DS, Tourova TP, Poltaraus AB, Nazina TN.

Data Brief. 2019 Jul 25;25:104319. doi: 10.1016/j.dib.2019.104319. eCollection 2019 Aug.

2.

Prosthecochloris marina sp. nov., a new green sulfur bacterium from the coastal zone of the South China Sea.

Bryantseva IA, Tarasov AL, Kostrikina NA, Gaisin VA, Grouzdev DS, Gorlenko VM.

Arch Microbiol. 2019 Jul 23. doi: 10.1007/s00203-019-01707-y. [Epub ahead of print]

PMID:
31338544
3.

Genome Sequences of Green- and Brown-Colored Strains of Chlorobium phaeovibrioides with Gas Vesicles.

Grouzdev DS, Lunina ON, Gaisin VA, Krutkina MS, Baslerov RV, Savvichev AS, Gorlenko VM.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00711-19. doi: 10.1128/MRA.00711-19.

4.

Draft Genome Sequence of Geotoga petraea Strain HO-Geo1, Isolated from a Petroleum Reservoir in Russia.

Grouzdev DS, Semenova EM, Sokolova DS, Tourova TP, Poltaraus AB, Nazina TN.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00706-19. doi: 10.1128/MRA.00706-19.

5.

Draft Genome Sequence of a Fermenting Bacterium, Soehngenia sp. Strain 1933P, Isolated from a Petroleum Reservoir in Azerbaijan.

Grouzdev DS, Bidzhieva SK, Sokolova DS, Tourova TP, Poltaraus AB, Nazina TN.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00689-19. doi: 10.1128/MRA.00689-19.

6.

Azospirillum palustre sp. nov., a methylotrophic nitrogen-fixing species isolated from raised bog.

Tikhonova EN, Grouzdev DS, Kravchenko IK.

Int J Syst Evol Microbiol. 2019 Sep;69(9):2787-2793. doi: 10.1099/ijsem.0.003560.

PMID:
31237535
7.

Geobacillus proteiniphilus sp. nov., a thermophilic bacterium isolated from a high-temperature heavy oil reservoir in China.

Semenova EM, Sokolova DS, Grouzdev DS, Poltaraus AB, Vinokurova NG, Tourova TP, Nazina TN.

Int J Syst Evol Microbiol. 2019 May 30. doi: 10.1099/ijsem.0.003486. [Epub ahead of print]

PMID:
31145676
8.

'Candidatus Oscillochloris fontis': a novel mesophilic phototrophic Chloroflexota bacterium belonging to the ubiquitous Oscillochloris genus.

Gaisin VA, Burganskaya EI, Grouzdev DS, Osipova NS, Ashikhmin AA, Sinetova MA, Krutkina MS, Bryantseva IA, Sukhacheva MV, Kochetkova TV, Koziaeva VV, Kalashnikov AM, Gorlenko VM.

FEMS Microbiol Lett. 2019 Apr 1;366(8). pii: fnz097. doi: 10.1093/femsle/fnz097.

PMID:
31054244
9.

Magnetospirillum kuznetsovii sp. nov., a novel magnetotactic bacterium isolated from a lake in the Moscow region.

Koziaeva VV, Rusakova SA, Slobodova NV, Uzun M, Kolganova TV, Skryabin KG, Grouzdev DS.

Int J Syst Evol Microbiol. 2019 Jul;69(7):1953-1959. doi: 10.1099/ijsem.0.003408. Epub 2019 Apr 30.

PMID:
31038447
10.

Bacterial communities of the microbial mats of Chokrak sulfide springs.

Burganskaya EI, Bryantseva IA, Krutkina MS, Grouzdev DS, Gorlenko VM.

Arch Microbiol. 2019 Aug;201(6):795-805. doi: 10.1007/s00203-019-01648-6. Epub 2019 Mar 14.

PMID:
30868175
11.

[Multiplex PCR for detection and quantification of GM potato event EH92-527-1 in food].

Tyshko NV, Sadykova EO, Grouzdev DS, Sukhacheva MV.

Vopr Pitan. 2019;88(1):57-61. doi: 10.24411/0042-8833-2019-10006. Epub 2018 Jul 13. Russian.

PMID:
30811134
12.

'Candidatus Viridilinea mediisalina', a novel phototrophic Chloroflexi bacterium from a Siberian soda lake.

Gaisin VA, Burganskaya EI, Grouzdev DS, Ashikhmin AA, Kostrikina NA, Bryantseva IA, Koziaeva VV, Gorlenko VM.

FEMS Microbiol Lett. 2019 Mar 1;366(5). pii: fnz043. doi: 10.1093/femsle/fnz043.

PMID:
30801645
13.

Genome Sequence of "Candidatus Viridilinea halotolerans" Chok-6, Isolated from a Saline Sulfide-Rich Spring.

Grouzdev DS, Burganskaya EI, Krutkina MS, Sukhacheva MV, Gorlenko VM.

Microbiol Resour Announc. 2019 Jan 24;8(4). pii: e01614-18. doi: 10.1128/MRA.01614-18. eCollection 2019 Jan.

14.

Draft Genome Sequence of a Sulfate-Reducing Bacterium, "Desulfofundulus salinum" 435T, Isolated from a High-Temperature Gas Field in Russia.

Grouzdev DS, Bidzhieva SK, Tourova TP, Krutkina MS, Poltaraus AB, Nazina TN.

Microbiol Resour Announc. 2018 Dec 6;7(22). pii: e01408-18. doi: 10.1128/MRA.01408-18. eCollection 2018 Dec.

15.

Genome Sequence of Prosthecochloris sp. Strain ZM and Prosthecochloris sp. Strain ZM-2, Isolated from an Arctic Meromictic Lake.

Grouzdev DS, Gaisin VA, Krutkina MS, Bryantseva IA, Lunina ON, Savvichev AS, Gorlenko VM.

Microbiol Resour Announc. 2018 Nov 29;7(21). pii: e01415-18. doi: 10.1128/MRA.01415-18. eCollection 2018 Nov.

16.

Draft Genome Sequence of a Fermenting Bacterium, "Sphaerochaeta halotolerans" 4-11T, from a Low-Temperature Petroleum Reservoir in Russia.

Grouzdev DS, Bidzhieva SK, Sokolova DS, Tourova TP, Patutina EO, Poltaraus AB, Nazina TN.

Microbiol Resour Announc. 2018 Nov 29;7(21). pii: e01345-18. doi: 10.1128/MRA.01345-18. eCollection 2018 Nov.

17.

Whole-genome sequence data and analysis of type strains 'Pusillimonas nitritireducens' and 'Pusillimonas subterraneus' isolated from nitrate- and radionuclide-contaminated groundwater in Russia.

Grouzdev DS, Tourova TP, Babich TL, Shevchenko MA, Sokolova DS, Abdullin RR, Poltaraus AB, Toshchakov SV, Nazina TN.

Data Brief. 2018 Oct 25;21:882-887. doi: 10.1016/j.dib.2018.10.060. eCollection 2018 Dec.

18.

Draft genome sequences of 'Candidatus Chloroploca asiatica' and 'Candidatus Viridilinea mediisalina', candidate representatives of the Chloroflexales order: phylogenetic and taxonomic implications.

Grouzdev DS, Rysina MS, Bryantseva IA, Gorlenko VM, Gaisin VA.

Stand Genomic Sci. 2018 Oct 11;13:24. doi: 10.1186/s40793-018-0329-8. eCollection 2018.

19.

Microbial Community and in situ Bioremediation of Groundwater by Nitrate Removal in the Zone of a Radioactive Waste Surface Repository.

Safonov AV, Babich TL, Sokolova DS, Grouzdev DS, Tourova TP, Poltaraus AB, Zakharova EV, Merkel AY, Novikov AP, Nazina TN.

Front Microbiol. 2018 Aug 23;9:1985. doi: 10.3389/fmicb.2018.01985. eCollection 2018.

20.

Draft Genome Sequence of Roseomonas aestuarii Strain JR1/69-1-13 Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia.

Grouzdev DS, Babich TL, Tourova TP, Sokolova DS, Abdullin RR, Poltaraus AB, Schevchenko MA, Toshchakov SV, Nazina TN.

Genome Announc. 2018 Jun 21;6(25). pii: e00583-18. doi: 10.1128/genomeA.00583-18.

21.

Draft Genome Sequence of a Dissimilatory U(VI)-Reducing Bacterium, Shewanella xiamenensis Strain DCB2-1, Isolated from Nitrate- and Radionuclide-Contaminated Groundwater in Russia.

Grouzdev DS, Safonov AV, Babich TL, Tourova TP, Krutkina MS, Nazina TN.

Genome Announc. 2018 Jun 21;6(25). pii: e00555-18. doi: 10.1128/genomeA.00555-18.

22.

Genome Sequence of Methylotrophic Azospirillum sp. Strain B2, Isolated from a Raised Sphagnum Bog.

Grouzdev DS, Tikhonova EN, Krutkina MS, Kravchenko IK.

Genome Announc. 2018 Jun 7;6(23). pii: e00492-18. doi: 10.1128/genomeA.00492-18.

23.

Benthic phototrophic community from Kiran soda lake, south-eastern Siberia.

Burganskaya EI, Bryantseva IA, Gaisin VA, Grouzdev DS, Rysina MS, Barkhutova DD, Baslerov RV, Gorlenko VM, Kuznetsov BB.

Extremophiles. 2018 Mar;22(2):211-220. doi: 10.1007/s00792-017-0989-0. Epub 2017 Dec 21.

PMID:
29270850
24.

The cell wall of the filamentous anoxygenic phototrophic bacterium Oscillochloris trichoides.

Keppen OI, Ivanovsky RN, Streshinskaya GM, Lebedeva NV, Shashkov AS, Dmitrenok AS, Grouzdev DS.

Microbiology. 2018 Jan;164(1):57-64. doi: 10.1099/mic.0.000590. Epub 2017 Dec 8.

PMID:
29219809
25.

Draft Genome Sequence of the Anoxygenic Phototrophic Bacterium Phaeospirillum fulvum MGU-K5.

Ivanovsky RN, Keppen OI, Lebedeva NN, Beletsky AV, Mardanov AV, Grouzdev DS.

Genome Announc. 2017 Aug 24;5(34). pii: e00895-17. doi: 10.1128/genomeA.00895-17.

26.

Chloroflexus islandicus sp. nov., a thermophilic filamentous anoxygenic phototrophic bacterium from a geyser.

Gaisin VA, Kalashnikov AM, Grouzdev DS, Sukhacheva MV, Kuznetsov BB, Gorlenko VM.

Int J Syst Evol Microbiol. 2017 May;67(5):1381-1386. doi: 10.1099/ijsem.0.001820. Epub 2017 May 30.

PMID:
28126046
27.

Diversity of magnetotactic bacteria of the Moskva River.

Kozyaeva VV, Grouzdev DS, Dziuba MV, Kolganova TV, Kuznetsov BB.

Mikrobiologiia. 2017 Jan-Feb;86(1):99-106. Chinese.

PMID:
30207148
28.

Draft Genome Sequences of Two Magnetotactic Bacteria, Magnetospirillum moscoviense BB-1 and Magnetospirillum marisnigri SP-1.

Koziaeva VV, Dziuba MV, Ivanov TM, Kuznetsov BB, Skryabin KG, Grouzdev DS.

Genome Announc. 2016 Aug 11;4(4). pii: e00814-16. doi: 10.1128/genomeA.00814-16.

29.

Draft Genome Sequence of Geobacillus subterraneus Strain K, a Hydrocarbon-Oxidizing Thermophilic Bacterium Isolated from a Petroleum Reservoir in Kazakhstan.

Poltaraus AB, Sokolova DS, Grouzdev DS, Ivanov TM, Malakho SG, Korshunova AV, Tourova TP, Nazina TN.

Genome Announc. 2016 Aug 4;4(4). pii: e00782-16. doi: 10.1128/genomeA.00782-16.

30.

Draft Genome Sequence of Chloroflexus sp. Strain isl-2, a Thermophilic Filamentous Anoxygenic Phototrophic Bacterium Isolated from the Strokkur Geyser, Iceland.

Gaisin VA, Ivanov TM, Kuznetsov BB, Gorlenko VM, Grouzdev DS.

Genome Announc. 2016 Jul 21;4(4). pii: e00714-16. doi: 10.1128/genomeA.00714-16.

31.

Draft Genome Sequence of Aeribacillus pallidus Strain 8m3, a Thermophilic Hydrocarbon-Oxidizing Bacterium Isolated from the Dagang Oil Field (China).

Poltaraus AB, Sokolova DS, Grouzdev DS, Ivanov TM, Malakho SG, Korshunova AV, Rozanov AS, Tourova TP, Nazina TN.

Genome Announc. 2016 Jun 9;4(3). pii: e00500-16. doi: 10.1128/genomeA.00500-16.

32.

Biogeography of thermophilic phototrophic bacteria belonging to Roseiflexus genus.

Gaisin VA, Grouzdev DS, Namsaraev ZB, Sukhacheva MV, Gorlenko VM, Kuznetsov BB.

FEMS Microbiol Ecol. 2016 Mar;92(3). pii: fiw012. doi: 10.1093/femsec/fiw012. Epub 2016 Jan 28.

PMID:
26826142
33.

Reconstruction of bacteriochlorophyll biosynthesis pathways in the filamentous anoxygenic phototrophic bacterium Oscillochloris trichoides DG-6 and evolution of anoxygenic phototrophs of the order Chloroflexales.

Grouzdev DS, Kuznetsov BB, Keppen OI, Krasil'nikova EN, Lebedeva NV, Ivanovsky RN.

Microbiology. 2015 Jan;161(Pt 1):120-30. doi: 10.1099/mic.0.082313-0. Epub 2014 Oct 21.

PMID:
25336470
34.

Optimized method for preparation of IgG-binding bacterial magnetic nanoparticles.

Grouzdev DS, Dziuba MV, Kurek DV, Ovchinnikov AI, Zhigalova NA, Kuznetsov BB, Skryabin KG.

PLoS One. 2014 Oct 15;9(10):e109914. doi: 10.1371/journal.pone.0109914. eCollection 2014.

35.

Draft Genome Sequence of Magnetospirillum sp. Strain SO-1, a Freshwater Magnetotactic Bacterium Isolated from the Ol'khovka River, Russia.

Grouzdev DS, Dziuba MV, Sukhacheva MS, Mardanov AV, Beletskiy AV, Kuznetsov BB, Skryabin KG.

Genome Announc. 2014 Apr 10;2(2). pii: e00235-14. doi: 10.1128/genomeA.00235-14.

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