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Items: 1 to 50 of 221

1.

Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana.

Grob S, Grossniklaus U.

Genome Biol. 2019 Jun 11;20(1):120. doi: 10.1186/s13059-019-1722-3.

2.

The SMC5/6 Complex Subunit NSE4A Is Involved in DNA Damage Repair and Seed Development.

Díaz M, Pečinková P, Nowicka A, Baroux C, Sakamoto T, Gandha PY, Jeřábková H, Matsunaga S, Grossniklaus U, Pecinka A.

Plant Cell. 2019 Jul;31(7):1579-1597. doi: 10.1105/tpc.18.00043. Epub 2019 Apr 29.

3.

The Boechera Genus as a Resource for Apomixis Research.

Brukhin V, Osadtchiy JV, Florez-Rueda AM, Smetanin D, Bakin E, Nobre MS, Grossniklaus U.

Front Plant Sci. 2019 Apr 2;10:392. doi: 10.3389/fpls.2019.00392. eCollection 2019. Review.

4.

Consistent Reanalysis of Genome-wide Imprinting Studies in Plants Using Generalized Linear Models Increases Concordance across Datasets.

Wyder S, Raissig MT, Grossniklaus U.

Sci Rep. 2019 Feb 4;9(1):1320. doi: 10.1038/s41598-018-36768-4.

5.

Preface.

Grossniklaus U.

Curr Top Dev Biol. 2019;131:xvii-xviii. doi: 10.1016/S0070-2153(18)30123-6. No abstract available.

PMID:
30612634
6.

Seeds-An evolutionary innovation underlying reproductive success in flowering plants.

Baroux C, Grossniklaus U.

Curr Top Dev Biol. 2019;131:605-642. doi: 10.1016/bs.ctdb.2018.11.017. Epub 2018 Dec 23.

PMID:
30612632
7.

Contribution of epigenetic variation to adaptation in Arabidopsis.

Schmid MW, Heichinger C, Coman Schmid D, Guthörl D, Gagliardini V, Bruggmann R, Aluri S, Aquino C, Schmid B, Turnbull LA, Grossniklaus U.

Nat Commun. 2018 Oct 25;9(1):4446. doi: 10.1038/s41467-018-06932-5.

8.

Improved Brassica rapa reference genome by single-molecule sequencing and chromosome conformation capture technologies.

Zhang L, Cai X, Wu J, Liu M, Grob S, Cheng F, Liang J, Cai C, Liu Z, Liu B, Wang F, Li S, Liu F, Li X, Cheng L, Yang W, Li MH, Grossniklaus U, Zheng H, Wang X.

Hortic Res. 2018 Aug 15;5:50. doi: 10.1038/s41438-018-0071-9. eCollection 2018.

9.

Aberrant imprinting may underlie evolution of parthenogenesis.

Kirioukhova O, Shah JN, Larsen DS, Tayyab M, Mueller NE, Govind G, Baroux C, Federer M, Gheyselinck J, Barrell PJ, Ma H, Sprunck S, Huettel B, Wallace H, Grossniklaus U, Johnston AJ.

Sci Rep. 2018 Jul 13;8(1):10626. doi: 10.1038/s41598-018-27863-7.

10.

Feeling the force: how pollen tubes deal with obstacles.

Burri JT, Vogler H, Läubli NF, Hu C, Grossniklaus U, Nelson BJ.

New Phytol. 2018 Oct;220(1):187-195. doi: 10.1111/nph.15260. Epub 2018 Jun 15.

PMID:
29905972
11.

Whole-mount Clearing and Staining of Arabidopsis Flower Organs and Siliques.

Hedhly A, Vogler H, Eichenberger C, Grossniklaus U.

J Vis Exp. 2018 Apr 12;(134). doi: 10.3791/56441.

PMID:
29708535
12.

Assembly of the Boechera retrofracta Genome and Evolutionary Analysis of Apomixis-Associated Genes.

Kliver S, Rayko M, Komissarov A, Bakin E, Zhernakova D, Prasad K, Rushworth C, Baskar R, Smetanin D, Schmutz J, Rokhsar DS, Mitchell-Olds T, Grossniklaus U, Brukhin V.

Genes (Basel). 2018 Mar 28;9(4). pii: E185. doi: 10.3390/genes9040185.

13.

Extensive epigenetic reprogramming during the life cycle of Marchantia polymorpha.

Schmid MW, Giraldo-Fonseca A, Rövekamp M, Smetanin D, Bowman JL, Grossniklaus U.

Genome Biol. 2018 Jan 25;19(1):9. doi: 10.1186/s13059-017-1383-z.

14.

Polyspermy produces tri-parental seeds in maize.

Grossniklaus U.

Curr Biol. 2017 Dec 18;27(24):R1300-R1302. doi: 10.1016/j.cub.2017.10.059.

15.

LRX Proteins Play a Crucial Role in Pollen Grain and Pollen Tube Cell Wall Development.

Fabrice TN, Vogler H, Draeger C, Munglani G, Gupta S, Herger AG, Knox P, Grossniklaus U, Ringli C.

Plant Physiol. 2018 Mar;176(3):1981-1992. doi: 10.1104/pp.17.01374. Epub 2017 Dec 15.

16.

RALF4/19 peptides interact with LRX proteins to control pollen tube growth in Arabidopsis.

Mecchia MA, Santos-Fernandez G, Duss NN, Somoza SC, Boisson-Dernier A, Gagliardini V, Martínez-Bernardini A, Fabrice TN, Ringli C, Muschietti JP, Grossniklaus U.

Science. 2017 Dec 22;358(6370):1600-1603. doi: 10.1126/science.aao5467. Epub 2017 Dec 14.

PMID:
29242232
17.

Efficient preparation of Arabidopsis pollen tubes for ultrastructural analysis using chemical and cryo-fixation.

Ndinyanka Fabrice T, Kaech A, Barmettler G, Eichenberger C, Knox JP, Grossniklaus U, Ringli C.

BMC Plant Biol. 2017 Oct 27;17(1):176. doi: 10.1186/s12870-017-1136-x.

18.

Cell-Type Specific Chromatin Analysis in Whole-Mount Plant Tissues by Immunostaining.

She W, Baroux C, Grossniklaus U.

Methods Mol Biol. 2018;1675:443-454. doi: 10.1007/978-1-4939-7318-7_25.

PMID:
29052206
19.

Identification of Parent-of-Origin-Dependent QTLs Using Bulk-Segregant Sequencing (Bulk-Seq).

Pires ND, Grossniklaus U.

Methods Mol Biol. 2018;1675:361-371. doi: 10.1007/978-1-4939-7318-7_21.

PMID:
29052202
20.

Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome.

Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F, Adam C, Aki SS, Althoff F, Araki T, Arteaga-Vazquez MA, Balasubrmanian S, Barry K, Bauer D, Boehm CR, Briginshaw L, Caballero-Perez J, Catarino B, Chen F, Chiyoda S, Chovatia M, Davies KM, Delmans M, Demura T, Dierschke T, Dolan L, Dorantes-Acosta AE, Eklund DM, Florent SN, Flores-Sandoval E, Fujiyama A, Fukuzawa H, Galik B, Grimanelli D, Grimwood J, Grossniklaus U, Hamada T, Haseloff J, Hetherington AJ, Higo A, Hirakawa Y, Hundley HN, Ikeda Y, Inoue K, Inoue SI, Ishida S, Jia Q, Kakita M, Kanazawa T, Kawai Y, Kawashima T, Kennedy M, Kinose K, Kinoshita T, Kohara Y, Koide E, Komatsu K, Kopischke S, Kubo M, Kyozuka J, Lagercrantz U, Lin SS, Lindquist E, Lipzen AM, Lu CW, De Luna E, Martienssen RA, Minamino N, Mizutani M, Mizutani M, Mochizuki N, Monte I, Mosher R, Nagasaki H, Nakagami H, Naramoto S, Nishitani K, Ohtani M, Okamoto T, Okumura M, Phillips J, Pollak B, Reinders A, Rövekamp M, Sano R, Sawa S, Schmid MW, Shirakawa M, Solano R, Spunde A, Suetsugu N, Sugano S, Sugiyama A, Sun R, Suzuki Y, Takenaka M, Takezawa D, Tomogane H, Tsuzuki M, Ueda T, Umeda M, Ward JM, Watanabe Y, Yazaki K, Yokoyama R, Yoshitake Y, Yotsui I, Zachgo S, Schmutz J.

Cell. 2017 Oct 5;171(2):287-304.e15. doi: 10.1016/j.cell.2017.09.030.

21.

An Introduction to Male Germline Development.

Vogler H, Grossniklaus U, Hedhly A.

Methods Mol Biol. 2017;1669:3-15. doi: 10.1007/978-1-4939-7286-9_1.

PMID:
28936645
22.

RETINOBLASTOMA RELATED1 mediates germline entry in Arabidopsis.

Zhao X, Bramsiepe J, Van Durme M, Komaki S, Prusicki MA, Maruyama D, Forner J, Medzihradszky A, Wijnker E, Harashima H, Lu Y, Schmidt A, Guthörl D, Logroño RS, Guan Y, Pochon G, Grossniklaus U, Laux T, Higashiyama T, Lohmann JU, Nowack MK, Schnittger A.

Science. 2017 Apr 28;356(6336). pii: eaaf6532. doi: 10.1126/science.aaf6532.

PMID:
28450583
23.

Correction: High precision, localized proton gradients and fluxes generated by a microelectrode device induce differential growth behaviors of pollen tubes.

Hu C, Vogler H, Aellen M, Shamsudhin N, Jang B, Burri JT, Läubli N, Grossniklaus U, Pané S, Nelson BJ.

Lab Chip. 2017 May 2;17(9):1678. doi: 10.1039/c7lc90041d.

PMID:
28426092
24.

Chromosome conformation capture-based studies reveal novel features of plant nuclear architecture.

Grob S, Grossniklaus U.

Curr Opin Plant Biol. 2017 Apr;36:149-157. doi: 10.1016/j.pbi.2017.03.004. Epub 2017 Apr 12. Review.

PMID:
28411415
25.

Proteogenomic Analysis Greatly Expands the Identification of Proteins Related to Reproduction in the Apogamous Fern Dryopteris affinis ssp. affinis.

Grossmann J, Fernández H, Chaubey PM, Valdés AE, Gagliardini V, Cañal MJ, Russo G, Grossniklaus U.

Front Plant Sci. 2017 Mar 22;8:336. doi: 10.3389/fpls.2017.00336. eCollection 2017.

26.

Probing the micromechanics of the fastest growing plant cell - the pollen tube.

Shamsudhin N, Atakan HB, Laubli N, Vogler H, Chengzhi Hu, Sebastian A, Grossniklaus U, Nelson BJ.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:461-464. doi: 10.1109/EMBC.2016.7590739.

PMID:
28268371
27.

Correction: Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform.

Shamsudhin N, Laeubli N, Atakan HB, Vogler H, Hu C, Haeberle W, Sebastian A, Grossniklaus U, Nelson BJ.

PLoS One. 2017 Feb 8;12(2):e0171981. doi: 10.1371/journal.pone.0171981. eCollection 2017.

28.

High precision, localized proton gradients and fluxes generated by a microelectrode device induce differential growth behaviors of pollen tubes.

Hu C, Vogler H, Aellen M, Shamsudhin N, Jang B, Burri JT, Läubli N, Grossniklaus U, Pané S, Nelson BJ.

Lab Chip. 2017 Feb 14;17(4):671-680. doi: 10.1039/c6lc01307d. Erratum in: Lab Chip. 2017 May 2;17 (9):1678.

PMID:
28098283
29.

Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform.

Shamsudhin N, Laeubli N, Atakan HB, Vogler H, Hu C, Haeberle W, Sebastian A, Grossniklaus U, Nelson BJ.

PLoS One. 2016 Dec 15;11(12):e0168138. doi: 10.1371/journal.pone.0168138. eCollection 2016. Erratum in: PLoS One. 2017 Feb 8;12 (2):e0171981.

30.

Characterization of size-dependent mechanical properties of tip-growing cells using a lab-on-chip device.

Hu C, Munglani G, Vogler H, Ndinyanka Fabrice T, Shamsudhin N, Wittel FK, Ringli C, Grossniklaus U, Herrmann HJ, Nelson BJ.

Lab Chip. 2016 Dec 20;17(1):82-90.

PMID:
27883138
31.

Starch Turnover and Metabolism during Flower and Early Embryo Development.

Hedhly A, Vogler H, Schmid MW, Pazmino D, Gagliardini V, Santelia D, Grossniklaus U.

Plant Physiol. 2016 Dec;172(4):2388-2402. Epub 2016 Oct 28.

33.

Chromatin Conformation Capture-Based Analysis of Nuclear Architecture.

Grob S, Grossniklaus U.

Methods Mol Biol. 2017;1456:15-32.

PMID:
27770354
34.
35.

Genomic Imprinting in the Endosperm Is Systematically Perturbed in Abortive Hybrid Tomato Seeds.

Florez-Rueda AM, Paris M, Schmidt A, Widmer A, Grossniklaus U, Städler T.

Mol Biol Evol. 2016 Nov;33(11):2935-2946. Epub 2016 Sep 6.

36.

Genome-Wide Targets Regulated by the OsMADS1 Transcription Factor Reveals Its DNA Recognition Properties.

Khanday I, Das S, Chongloi GL, Bansal M, Grossniklaus U, Vijayraghavan U.

Plant Physiol. 2016 Sep;172(1):372-88. doi: 10.1104/pp.16.00789. Epub 2016 Jul 25.

37.

Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization.

Rövekamp M, Bowman JL, Grossniklaus U.

Curr Biol. 2016 Jul 11;26(13):1782-1789. doi: 10.1016/j.cub.2016.05.028. Epub 2016 Jun 23.

38.

Laser-assisted Microdissection (LAM) as a Tool for Transcriptional Profiling of Individual Cell Types.

Florez Rueda AM, Grossniklaus U, Schmidt A.

J Vis Exp. 2016 May 10;(111). doi: 10.3791/53916.

39.

Amino Acid Change in an Orchid Desaturase Enables Mimicry of the Pollinator's Sex Pheromone.

Sedeek KE, Whittle E, Guthörl D, Grossniklaus U, Shanklin J, Schlüter PM.

Curr Biol. 2016 Jun 6;26(11):1505-11. doi: 10.1016/j.cub.2016.04.018. Epub 2016 May 19.

40.

Maybe she's NOT the boss: male-female crosstalk during sexual plant reproduction.

Vogler H, Martinez-Bernardini A, Grossniklaus U.

Genome Biol. 2016 May 9;17:96. doi: 10.1186/s13059-016-0972-6.

41.

Seed Production Affects Maternal Growth and Senescence in Arabidopsis.

Wuest SE, Philipp MA, Guthörl D, Schmid B, Grossniklaus U.

Plant Physiol. 2016 May;171(1):392-404. doi: 10.1104/pp.15.01995. Epub 2016 Mar 23.

42.

A subunit of the oligosaccharyltransferase complex is required for interspecific gametophyte recognition in Arabidopsis.

Müller LM, Lindner H, Pires ND, Gagliardini V, Grossniklaus U.

Nat Commun. 2016 Mar 11;7:10826. doi: 10.1038/ncomms10826.

43.

Non-random chromosome arrangement in triploid endosperm nuclei.

Baroux C, Pecinka A, Fuchs J, Kreth G, Schubert I, Grossniklaus U.

Chromosoma. 2017 Feb;126(1):115-124. doi: 10.1007/s00412-016-0578-5. Epub 2016 Feb 19.

44.

Apomixis Allows the Transgenerational Fixation of Phenotypes in Hybrid Plants.

Sailer C, Schmid B, Grossniklaus U.

Curr Biol. 2016 Feb 8;26(3):331-7. doi: 10.1016/j.cub.2015.12.045. Epub 2016 Jan 28.

45.

Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

Pires ND, Bemer M, Müller LM, Baroux C, Spillane C, Grossniklaus U.

PLoS Genet. 2016 Jan 26;12(1):e1005806. doi: 10.1371/journal.pgen.1005806. eCollection 2016 Jan.

46.

The female gametophyte: an emerging model for cell type-specific systems biology in plant development.

Schmid MW, Schmidt A, Grossniklaus U.

Front Plant Sci. 2015 Nov 3;6:907. doi: 10.3389/fpls.2015.00907. eCollection 2015. Review.

47.

Receptor-like cytoplasmic kinase MARIS functions downstream of CrRLK1L-dependent signaling during tip growth.

Boisson-Dernier A, Franck CM, Lituiev DS, Grossniklaus U.

Proc Natl Acad Sci U S A. 2015 Sep 29;112(39):12211-6. doi: 10.1073/pnas.1512375112. Epub 2015 Sep 16.

48.

The Maternal-to-Zygotic Transition in Flowering Plants: Evidence, Mechanisms, and Plasticity.

Baroux C, Grossniklaus U.

Curr Top Dev Biol. 2015;113:351-71. doi: 10.1016/bs.ctdb.2015.06.005. Epub 2015 Aug 13. Review.

PMID:
26358878
49.

HiCdat: a fast and easy-to-use Hi-C data analysis tool.

Schmid MW, Grob S, Grossniklaus U.

BMC Bioinformatics. 2015 Sep 3;16:277. doi: 10.1186/s12859-015-0678-x.

50.

TURAN and EVAN mediate pollen tube reception in Arabidopsis Synergids through protein glycosylation.

Lindner H, Kessler SA, Müller LM, Shimosato-Asano H, Boisson-Dernier A, Grossniklaus U.

PLoS Biol. 2015 Apr 28;13(4):e1002139. doi: 10.1371/journal.pbio.1002139. eCollection 2015 Apr.

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