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Proteomics quantifies protein expression changes in a model cnidarian colonised by a thermally tolerant but suboptimal symbiont.

Sproles AE, Oakley CA, Matthews JL, Peng L, Owen JG, Grossman AR, Weis VM, Davy SK.

ISME J. 2019 May 22. doi: 10.1038/s41396-019-0437-5. [Epub ahead of print]


Alternative outlets for sustaining photosynthetic electron transport during dark-to-light transitions.

Saroussi S, Karns DAJ, Thomas DC, Bloszies C, Fiehn O, Posewitz MC, Grossman AR.

Proc Natl Acad Sci U S A. 2019 Jun 4;116(23):11518-11527. doi: 10.1073/pnas.1903185116. Epub 2019 May 17.


A genome-wide algal mutant library and functional screen identifies genes required for eukaryotic photosynthesis.

Li X, Patena W, Fauser F, Jinkerson RE, Saroussi S, Meyer MT, Ivanova N, Robertson JM, Yue R, Zhang R, Vilarrasa-Blasi J, Wittkopp TM, Ramundo S, Blum SR, Goh A, Laudon M, Srikumar T, Lefebvre PA, Grossman AR, Jonikas MC.

Nat Genet. 2019 Apr;51(4):627-635. doi: 10.1038/s41588-019-0370-6. Epub 2019 Mar 18.


The mitochondrial alternative oxidase from Chlamydomonas reinhardtii enables survival in high light.

Kaye Y, Huang W, Clowez S, Saroussi S, Idoine A, Sanz-Luque E, Grossman AR.

J Biol Chem. 2019 Jan 25;294(4):1380-1395. doi: 10.1074/jbc.RA118.004667. Epub 2018 Dec 3.


Partner switching and metabolic flux in a model cnidarian-dinoflagellate symbiosis.

Matthews JL, Oakley CA, Lutz A, Hillyer KE, Roessner U, Grossman AR, Weis VM, Davy SK.

Proc Biol Sci. 2018 Nov 28;285(1892). pii: 20182336. doi: 10.1098/rspb.2018.2336.


From molecular manipulation of domesticated Chlamydomonas reinhardtii to survival in nature.

Sasso S, Stibor H, Mittag M, Grossman AR.

Elife. 2018 Nov 1;7. pii: e39233. doi: 10.7554/eLife.39233. Review.


A giant type I polyketide synthase participates in zygospore maturation in Chlamydomonas reinhardtii.

Heimerl N, Hommel E, Westermann M, Meichsner D, Lohr M, Hertweck C, Grossman AR, Mittag M, Sasso S.

Plant J. 2018 Jul;95(2):268-281. doi: 10.1111/tpj.13948. Epub 2018 Jun 5.


GreenCut protein CPLD49 of Chlamydomonas reinhardtii associates with thylakoid membranes and is required for cytochrome b6 f complex accumulation.

Wittkopp TM, Saroussi S, Yang W, Johnson X, Kim RG, Heinnickel ML, Russell JJ, Phuthong W, Dent RM, Broeckling CD, Peers G, Lohr M, Wollman FA, Niyogi KK, Grossman AR.

Plant J. 2018 Jun;94(6):1023-1037. doi: 10.1111/tpj.13915. Epub 2018 May 16. Erratum in: Plant J. 2019 Jun;98(5):953-954.


Phylogenetic characterization of transporter proteins in the cnidarian-dinoflagellate symbiosis.

Sproles AE, Kirk NL, Kitchen SA, Oakley CA, Grossman AR, Weis VM, Davy SK.

Mol Phylogenet Evol. 2018 Mar;120:307-320. doi: 10.1016/j.ympev.2017.12.007. Epub 2017 Dec 9.


Glucose-Induced Trophic Shift in an Endosymbiont Dinoflagellate with Physiological and Molecular Consequences.

Xiang T, Jinkerson RE, Clowez S, Tran C, Krediet CJ, Onishi M, Cleves PA, Pringle JR, Grossman AR.

Plant Physiol. 2018 Feb;176(2):1793-1807. doi: 10.1104/pp.17.01572. Epub 2017 Dec 7.


Flocculation of Chlamydomonas reinhardtii with Different Phenotypic Traits by Metal Cations and High pH.

Fan J, Zheng L, Bai Y, Saroussi S, Grossman AR.

Front Plant Sci. 2017 Nov 20;8:1997. doi: 10.3389/fpls.2017.01997. eCollection 2017.


Optimal nutrient exchange and immune responses operate in partner specificity in the cnidarian-dinoflagellate symbiosis.

Matthews JL, Crowder CM, Oakley CA, Lutz A, Roessner U, Meyer E, Grossman AR, Weis VM, Davy SK.

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):13194-13199. doi: 10.1073/pnas.1710733114. Epub 2017 Nov 20. Erratum in: Proc Natl Acad Sci U S A. 2017 Dec 11;:.


Bilin-Dependent Photoacclimation in Chlamydomonas reinhardtii.

Wittkopp TM, Schmollinger S, Saroussi S, Hu W, Zhang W, Fan Q, Gallaher SD, Leonard MT, Soubeyrand E, Basset GJ, Merchant SS, Grossman AR, Duanmu D, Lagarias JC.

Plant Cell. 2017 Nov;29(11):2711-2726. doi: 10.1105/tpc.17.00149. Epub 2017 Oct 30.


Pyrenoid loss in Chlamydomonas reinhardtii causes limitations in CO2 supply, but not thylakoid operating efficiency.

Caspari OD, Meyer MT, Tolleter D, Wittkopp TM, Cunniffe NJ, Lawson T, Grossman AR, Griffiths H.

J Exp Bot. 2017 Jun 1;68(14):3903-3913. doi: 10.1093/jxb/erx197.


Biotic interactions as drivers of algal origin and evolution.

Brodie J, Ball SG, Bouget FY, Chan CX, De Clerck O, Cock JM, Gachon C, Grossman AR, Mock T, Raven JA, Saha M, Smith AG, Vardi A, Yoon HS, Bhattacharya D.

New Phytol. 2017 Nov;216(3):670-681. doi: 10.1111/nph.14760. Epub 2017 Aug 31. Review.


Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta).

Brawley SH, Blouin NA, Ficko-Blean E, Wheeler GL, Lohr M, Goodson HV, Jenkins JW, Blaby-Haas CE, Helliwell KE, Chan CX, Marriage TN, Bhattacharya D, Klein AS, Badis Y, Brodie J, Cao Y, Collén J, Dittami SM, Gachon CMM, Green BR, Karpowicz SJ, Kim JW, Kudahl UJ, Lin S, Michel G, Mittag M, Olson BJSC, Pangilinan JL, Peng Y, Qiu H, Shu S, Singer JT, Smith AG, Sprecher BN, Wagner V, Wang W, Wang ZY, Yan J, Yarish C, Zäuner-Riek S, Zhuang Y, Zou Y, Lindquist EA, Grimwood J, Barry KW, Rokhsar DS, Schmutz J, Stiller JW, Grossman AR, Prochnik SE.

Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):E6361-E6370. doi: 10.1073/pnas.1703088114. Epub 2017 Jul 17.


Nutrient scavenging and energy management: acclimation responses in nitrogen and sulfur deprived Chlamydomonas.

Saroussi S, Sanz-Luque E, Kim RG, Grossman AR.

Curr Opin Plant Biol. 2017 Oct;39:114-122. doi: 10.1016/j.pbi.2017.06.002. Epub 2017 Jul 7. Review.


The Algal Revolution.

Brodie J, Chan CX, De Clerck O, Cock JM, Coelho SM, Gachon C, Grossman AR, Mock T, Raven JA, Smith AG, Yoon HS, Bhattacharya D.

Trends Plant Sci. 2017 Aug;22(8):726-738. doi: 10.1016/j.tplants.2017.05.005. Epub 2017 Jun 10. Review.


Thermal Shock Induces Host Proteostasis Disruption and Endoplasmic Reticulum Stress in the Model Symbiotic Cnidarian Aiptasia.

Oakley CA, Durand E, Wilkinson SP, Peng L, Weis VM, Grossman AR, Davy SK.

J Proteome Res. 2017 Jun 2;16(6):2121-2134. doi: 10.1021/acs.jproteome.6b00797. Epub 2017 May 11.


A robust protocol for efficient generation, and genomic characterization of insertional mutants of Chlamydomonas reinhardtii.

Pollock SV, Mukherjee B, Bajsa-Hirschel J, Machingura MC, Mukherjee A, Grossman AR, Moroney JV.

Plant Methods. 2017 Apr 3;13:22. doi: 10.1186/s13007-017-0170-x. eCollection 2017.


Impact of light intensity and quality on chromatophore and nuclear gene expression in Paulinella chromatophora, an amoeba with nascent photosynthetic organelles.

Zhang R, Nowack EC, Price DC, Bhattacharya D, Grossman AR.

Plant J. 2017 Apr;90(2):221-234. doi: 10.1111/tpj.13488. Epub 2017 Mar 22.


Development of a toolbox to dissect host-endosymbiont interactions and protein trafficking in the trypanosomatid Angomonas deanei.

Morales J, Kokkori S, Weidauer D, Chapman J, Goltsman E, Rokhsar D, Grossman AR, Nowack EC.

BMC Evol Biol. 2016 Nov 11;16(1):247.


Gene transfers from diverse bacteria compensate for reductive genome evolution in the chromatophore of Paulinella chromatophora.

Nowack EC, Price DC, Bhattacharya D, Singer A, Melkonian M, Grossman AR.

Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):12214-12219. Epub 2016 Oct 10.


Relative Contributions of Various Cellular Mechanisms to Loss of Algae during Cnidarian Bleaching.

Bieri T, Onishi M, Xiang T, Grossman AR, Pringle JR.

PLoS One. 2016 Apr 27;11(4):e0152693. doi: 10.1371/journal.pone.0152693. eCollection 2016.


Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis.

Kim JW, Brawley SH, Prochnik S, Chovatia M, Grimwood J, Jenkins J, LaButti K, Mavromatis K, Nolan M, Zane M, Schmutz J, Stiller JW, Grossman AR.

PLoS One. 2016 Mar 25;11(3):e0151883. doi: 10.1371/journal.pone.0151883. eCollection 2016.


Tetratricopeptide repeat protein protects photosystem I from oxidative disruption during assembly.

Heinnickel M, Kim RG, Wittkopp TM, Yang W, Walters KA, Herbert SK, Grossman AR.

Proc Natl Acad Sci U S A. 2016 Mar 8;113(10):2774-9. doi: 10.1073/pnas.1524040113. Epub 2016 Feb 22.


An Indexed, Mapped Mutant Library Enables Reverse Genetics Studies of Biological Processes in Chlamydomonas reinhardtii.

Li X, Zhang R, Patena W, Gang SS, Blum SR, Ivanova N, Yue R, Robertson JM, Lefebvre PA, Fitz-Gibbon ST, Grossman AR, Jonikas MC.

Plant Cell. 2016 Feb;28(2):367-87. doi: 10.1105/tpc.15.00465. Epub 2016 Jan 13.


Symbiosis induces widespread changes in the proteome of the model cnidarian Aiptasia.

Oakley CA, Ameismeier MF, Peng L, Weis VM, Grossman AR, Davy SK.

Cell Microbiol. 2016 Jul;18(7):1009-23. doi: 10.1111/cmi.12564. Epub 2016 Feb 5.


Critical role of Chlamydomonas reinhardtii ferredoxin-5 in maintaining membrane structure and dark metabolism.

Yang W, Wittkopp TM, Li X, Warakanont J, Dubini A, Catalanotti C, Kim RG, Nowack EC, Mackinder LC, Aksoy M, Page MD, D'Adamo S, Saroussi S, Heinnickel M, Johnson X, Richaud P, Alric J, Boehm M, Jonikas MC, Benning C, Merchant SS, Posewitz MC, Grossman AR.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14978-83. doi: 10.1073/pnas.1515240112. Epub 2015 Nov 16.


Menthol-induced bleaching rapidly and effectively provides experimental aposymbiotic sea anemones (Aiptasia sp.) for symbiosis investigations.

Matthews JL, Sproles AE, Oakley CA, Grossman AR, Weis VM, Davy SK.

J Exp Biol. 2016 Feb;219(Pt 3):306-10. doi: 10.1242/jeb.128934. Epub 2015 Nov 23.


Gordon research conference on the dynamics and regulation of photosynthesis: from the origin of bio-catalysis to innovative solar conversion.

Govindjee, Grossman AR, Bhaya D.

Photosynth Res. 2016 Mar;127(3):379-89. doi: 10.1007/s11120-015-0187-9.


The Use of Contact Mode Atomic Force Microscopy in Aqueous Medium for Structural Analysis of Spinach Photosynthetic Complexes.

Phuthong W, Huang Z, Wittkopp TM, Sznee K, Heinnickel ML, Dekker JP, Frese RN, Prinz FB, Grossman AR.

Plant Physiol. 2015 Oct;169(2):1318-32. doi: 10.1104/pp.15.00706. Epub 2015 Jul 28.


Algae after dark: mechanisms to cope with anoxic/hypoxic conditions.

Yang W, Catalanotti C, Wittkopp TM, Posewitz MC, Grossman AR.

Plant J. 2015 May;82(3):481-503. doi: 10.1111/tpj.12823. Review.


Symbiodinium transcriptome and global responses of cells to immediate changes in light intensity when grown under autotrophic or mixotrophic conditions.

Xiang T, Nelson W, Rodriguez J, Tolleter D, Grossman AR.

Plant J. 2015 Apr;82(1):67-80. doi: 10.1111/tpj.12789. Epub 2015 Mar 7.


Alternative acetate production pathways in Chlamydomonas reinhardtii during dark anoxia and the dominant role of chloroplasts in fermentative acetate production.

Yang W, Catalanotti C, D'Adamo S, Wittkopp TM, Ingram-Smith CJ, Mackinder L, Miller TE, Heuberger AL, Peers G, Smith KS, Jonikas MC, Grossman AR, Posewitz MC.

Plant Cell. 2014 Nov;26(11):4499-518. doi: 10.1105/tpc.114.129965. Epub 2014 Nov 7.


Profiling Chlamydomonas metabolism under dark, anoxic H2-producing conditions using a combined proteomic, transcriptomic, and metabolomic approach.

Subramanian V, Dubini A, Astling DP, Laurens LM, Old WM, Grossman AR, Posewitz MC, Seibert M.

J Proteome Res. 2014 Dec 5;13(12):5431-51. doi: 10.1021/pr500342j. Epub 2014 Oct 21.


Critical function of a Chlamydomonas reinhardtii putative polyphosphate polymerase subunit during nutrient deprivation.

Aksoy M, Pootakham W, Grossman AR.

Plant Cell. 2014 Oct;26(10):4214-29. doi: 10.1105/tpc.114.129270. Epub 2014 Oct 3.


Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism.

Schmollinger S, Mühlhaus T, Boyle NR, Blaby IK, Casero D, Mettler T, Moseley JL, Kropat J, Sommer F, Strenkert D, Hemme D, Pellegrini M, Grossman AR, Stitt M, Schroda M, Merchant SS.

Plant Cell. 2014 Apr;26(4):1410-1435. Epub 2014 Apr 18.


Proton gradient regulation 5-mediated cyclic electron flow under ATP- or redox-limited conditions: a study of ΔATpase pgr5 and ΔrbcL pgr5 mutants in the green alga Chlamydomonas reinhardtii.

Johnson X, Steinbeck J, Dent RM, Takahashi H, Richaud P, Ozawa S, Houille-Vernes L, Petroutsos D, Rappaport F, Grossman AR, Niyogi KK, Hippler M, Alric J.

Plant Physiol. 2014 May;165(1):438-52. doi: 10.1104/pp.113.233593. Epub 2014 Mar 12.


Coral bleaching independent of photosynthetic activity.

Tolleter D, Seneca FO, DeNofrio JC, Krediet CJ, Palumbi SR, Pringle JR, Grossman AR.

Curr Biol. 2013 Sep 23;23(18):1782-6. doi: 10.1016/j.cub.2013.07.041. Epub 2013 Sep 5.


Effect of temperature on photosynthesis and growth in marine Synechococcus spp.

Mackey KR, Paytan A, Caldeira K, Grossman AR, Moran D, McIlvin M, Saito MA.

Plant Physiol. 2013 Oct;163(2):815-29. doi: 10.1104/pp.113.221937. Epub 2013 Aug 15.


The GreenCut: re-evaluation of physiological role of previously studied proteins and potential novel protein functions.

Heinnickel ML, Grossman AR.

Photosynth Res. 2013 Oct;116(2-3):427-36. doi: 10.1007/s11120-013-9882-6. Epub 2013 Jul 20. Review.


Fermentation metabolism and its evolution in algae.

Catalanotti C, Yang W, Posewitz MC, Grossman AR.

Front Plant Sci. 2013 May 22;4:150. doi: 10.3389/fpls.2013.00150. eCollection 2013.


Isolation of clonal axenic strains of the symbiotic dinoflagellate Symbiodinium and their growth and host specificity(1).

Xiang T, Hambleton EA, DeNofrio JC, Pringle JR, Grossman AR.

J Phycol. 2013 Jun;49(3):447-58. doi: 10.1111/jpy.12055. Epub 2013 Apr 3.


Role of polyphosphate in thermophilic Synechococcus sp. from microbial mats.

Gomez-Garcia MR, Fazeli F, Grote A, Grossman AR, Bhaya D.

J Bacteriol. 2013 Aug;195(15):3309-19. doi: 10.1128/JB.00207-13. Epub 2013 May 17.


Diversity and abundance of the bacterial community of the red Macroalga Porphyra umbilicalis: did bacterial farmers produce macroalgae?

Miranda LN, Hutchison K, Grossman AR, Brawley SH.

PLoS One. 2013;8(3):e58269. doi: 10.1371/journal.pone.0058269. Epub 2013 Mar 20.


Tiered regulation of sulfur deprivation responses in Chlamydomonas reinhardtii and identification of an associated regulatory factor.

Aksoy M, Pootakham W, Pollock SV, Moseley JL, González-Ballester D, Grossman AR.

Plant Physiol. 2013 May;162(1):195-211. doi: 10.1104/pp.113.214593. Epub 2013 Mar 12.


Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival.

Duanmu D, Casero D, Dent RM, Gallaher S, Yang W, Rockwell NC, Martin SS, Pellegrini M, Niyogi KK, Merchant SS, Grossman AR, Lagarias JC.

Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3621-6. doi: 10.1073/pnas.1222375110. Epub 2013 Jan 23.


Novel thylakoid membrane GreenCut protein CPLD38 impacts accumulation of the cytochrome b6f complex and associated regulatory processes.

Heinnickel ML, Alric J, Wittkopp T, Yang W, Catalanotti C, Dent R, Niyogi KK, Wollman FA, Grossman AR.

J Biol Chem. 2013 Mar 8;288(10):7024-36. doi: 10.1074/jbc.M112.427476. Epub 2013 Jan 9.

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