Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 22

1.

Comparing evolutionary distances via adaptive distance functions.

Damti Y, Gronau I, Moran S, Yavneh I.

J Theor Biol. 2018 Mar 7;440:88-99. doi: 10.1016/j.jtbi.2017.12.022. Epub 2017 Dec 23.

PMID:
29277603
2.

Response to Hohenlohe et al.

vonHoldt BM, Cahill JA, Gronau I, Shapiro B, Wall J, Wayne RK.

Sci Adv. 2017 Jun 7;3(6):e1701233. doi: 10.1126/sciadv.1701233. eCollection 2017 Jun.

3.

Whole-genome sequence analysis shows that two endemic species of North American wolf are admixtures of the coyote and gray wolf.

vonHoldt BM, Cahill JA, Fan Z, Gronau I, Robinson J, Pollinger JP, Shapiro B, Wall J, Wayne RK.

Sci Adv. 2016 Jul 27;2(7):e1501714. doi: 10.1126/sciadv.1501714. eCollection 2016 Jul.

4.

Forced exercise-induced osteoarthritis is attenuated in mice lacking the small leucine-rich proteoglycan decorin.

Gronau T, Krüger K, Prein C, Aszodi A, Gronau I, Iozzo RV, Mooren FC, Clausen-Schaumann H, Bertrand J, Pap T, Bruckner P, Dreier R.

Ann Rheum Dis. 2017 Feb;76(2):442-449. doi: 10.1136/annrheumdis-2016-209319. Epub 2016 Jul 4.

PMID:
27377816
5.

Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs.

Freedman AH, Schweizer RM, Ortega-Del Vecchyo D, Han E, Davis BW, Gronau I, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Ramirez O, Hormozdiari F, Alkan C, Vilà C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Marques-Bonet T, Ostrander EA, Wayne RK, Novembre J.

PLoS Genet. 2016 Mar 4;12(3):e1005851. doi: 10.1371/journal.pgen.1005851. eCollection 2016 Mar.

6.

Ancient gene flow from early modern humans into Eastern Neanderthals.

Kuhlwilm M, Gronau I, Hubisz MJ, de Filippo C, Prado-Martinez J, Kircher M, Fu Q, Burbano HA, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajkovic D, Kucan Ž, Gušic I, Marques-Bonet T, Andrés AM, Viola B, Pääbo S, Meyer M, Siepel A, Castellano S.

Nature. 2016 Feb 25;530(7591):429-33. doi: 10.1038/nature16544. Epub 2016 Feb 17.

7.

Worldwide patterns of genomic variation and admixture in gray wolves.

Fan Z, Silva P, Gronau I, Wang S, Armero AS, Schweizer RM, Ramirez O, Pollinger J, Galaverni M, Ortega Del-Vecchyo D, Du L, Zhang W, Zhang Z, Xing J, Vilà C, Marques-Bonet T, Godinho R, Yue B, Wayne RK.

Genome Res. 2016 Feb;26(2):163-73. doi: 10.1101/gr.197517.115. Epub 2015 Dec 17.

8.

Distinguishing noise from signal in patterns of genomic divergence in a highly polymorphic avian radiation.

Campagna L, Gronau I, Silveira LF, Siepel A, Lovette IJ.

Mol Ecol. 2015 Aug;24(16):4238-51. doi: 10.1111/mec.13314. Epub 2015 Aug 3.

PMID:
26175196
9.

A method for calculating probabilities of fitness consequences for point mutations across the human genome.

Gulko B, Hubisz MJ, Gronau I, Siepel A.

Nat Genet. 2015 Mar;47(3):276-83. doi: 10.1038/ng.3196. Epub 2015 Jan 19.

10.

Adaptive evolution of testis-specific, recently evolved, clustered miRNAs in Drosophila.

Mohammed J, Bortolamiol-Becet D, Flynt AS, Gronau I, Siepel A, Lai EC.

RNA. 2014 Aug;20(8):1195-209. doi: 10.1261/rna.044644.114. Epub 2014 Jun 18.

11.

Genome-wide inference of ancestral recombination graphs.

Rasmussen MD, Hubisz MJ, Gronau I, Siepel A.

PLoS Genet. 2014 May 15;10(5):e1004342. doi: 10.1371/journal.pgen.1004342. eCollection 2014.

12.

Genome sequencing highlights the dynamic early history of dogs.

Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Beale H, Ramirez O, Hormozdiari F, Alkan C, Vilà C, Squire K, Geffen E, Kusak J, Boyko AR, Parker HG, Lee C, Tadigotla V, Wilton A, Siepel A, Bustamante CD, Harkins TT, Nelson SF, Ostrander EA, Marques-Bonet T, Wayne RK, Novembre J.

PLoS Genet. 2014 Jan;10(1):e1004016. doi: 10.1371/journal.pgen.1004016. Epub 2014 Jan 16. Erratum in: PLoS Genet. 2014 Aug;10(8):e1004631. Wilton, Alan [added].

13.

Genome-wide inference of natural selection on human transcription factor binding sites.

Arbiza L, Gronau I, Aksoy BA, Hubisz MJ, Gulko B, Keinan A, Siepel A.

Nat Genet. 2013 Jul;45(7):723-9. doi: 10.1038/ng.2658. Epub 2013 Jun 9.

14.

Inference of natural selection from interspersed genomic elements based on polymorphism and divergence.

Gronau I, Arbiza L, Mohammed J, Siepel A.

Mol Biol Evol. 2013 May;30(5):1159-71. doi: 10.1093/molbev/mst019. Epub 2013 Feb 5.

15.

Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions.

Doerr D, Gronau I, Moran S, Yavneh I.

Algorithms Mol Biol. 2012 Aug 31;7(1):22. doi: 10.1186/1748-7188-7-22.

16.

Replacing and additive horizontal gene transfer in Streptococcus.

Choi SC, Rasmussen MD, Hubisz MJ, Gronau I, Stanhope MJ, Siepel A.

Mol Biol Evol. 2012 Nov;29(11):3309-20. doi: 10.1093/molbev/mss138. Epub 2012 May 21.

17.

Bayesian inference of ancient human demography from individual genome sequences.

Gronau I, Hubisz MJ, Gulko B, Danko CG, Siepel A.

Nat Genet. 2011 Sep 18;43(10):1031-4. doi: 10.1038/ng.937.

18.

Recursive construction and error correction of DNA molecules and libraries from synthetic and natural DNA.

Yehezkel TB, Linshiz G, Kaplan S, Gronau I, Ravid S, Adar R, Shapiro E.

Methods Enzymol. 2011;498:207-45. doi: 10.1016/B978-0-12-385120-8.00010-3.

PMID:
21601680
19.

Adaptive distance measures for resolving K2P quartets: metric separation versus stochastic noise.

Gronau I, Moran S, Yavneh I.

J Comput Biol. 2010 Nov;17(11):1509-18. doi: 10.1089/cmb.2009.0236. Epub 2010 Jun 24.

PMID:
20575667
20.

Towards optimal distance functions for stochastic substitution models.

Gronau I, Moran S, Yavneh I.

J Theor Biol. 2009 Sep 21;260(2):294-307. doi: 10.1016/j.jtbi.2009.05.028. Epub 2009 Jun 6.

PMID:
19501101
21.

Recursive construction of perfect DNA molecules from imperfect oligonucleotides.

Linshiz G, Yehezkel TB, Kaplan S, Gronau I, Ravid S, Adar R, Shapiro E.

Mol Syst Biol. 2008;4:191. doi: 10.1038/msb.2008.26. Epub 2008 May 6.

22.

Neighbor joining algorithms for inferring phylogenies via LCA distances.

Gronau I, Moran S.

J Comput Biol. 2007 Jan-Feb;14(1):1-15.

PMID:
17381342

Supplemental Content

Loading ...
Support Center