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Items: 5

1.

Global DNA Compaction in Stationary-Phase Bacteria Does Not Affect Transcription.

Janissen R, Arens MMA, Vtyurina NN, Rivai Z, Sunday ND, Eslami-Mossallam B, Gritsenko AA, Laan L, de Ridder D, Artsimovitch I, Dekker NH, Abbondanzieri EA, Meyer AS.

Cell. 2018 Aug 23;174(5):1188-1199.e14. doi: 10.1016/j.cell.2018.06.049. Epub 2018 Jul 26.

PMID:
30057118
2.

Sequence features of viral and human Internal Ribosome Entry Sites predictive of their activity.

Gritsenko AA, Weingarten-Gabbay S, Elias-Kirma S, Nir R, de Ridder D, Segal E.

PLoS Comput Biol. 2017 Sep 18;13(9):e1005734. doi: 10.1371/journal.pcbi.1005734. eCollection 2017 Sep.

3.

Comparative genetics. Systematic discovery of cap-independent translation sequences in human and viral genomes.

Weingarten-Gabbay S, Elias-Kirma S, Nir R, Gritsenko AA, Stern-Ginossar N, Yakhini Z, Weinberger A, Segal E.

Science. 2016 Jan 15;351(6270). pii: aad4939. doi: 10.1126/science.aad4939. Epub 2016 Jan 14.

4.

Unbiased Quantitative Models of Protein Translation Derived from Ribosome Profiling Data.

Gritsenko AA, Hulsman M, Reinders MJ, de Ridder D.

PLoS Comput Biol. 2015 Aug 14;11(8):e1004336. doi: 10.1371/journal.pcbi.1004336. eCollection 2015 Aug.

5.

GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.

Gritsenko AA, Nijkamp JF, Reinders MJ, de Ridder D.

Bioinformatics. 2012 Jun 1;28(11):1429-37. doi: 10.1093/bioinformatics/bts175. Epub 2012 Apr 6.

PMID:
22492642

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