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Eukaryotic Cell Permeabilisation to Identify New Putative Chlamydial Type III Secretion System Effectors Secreted within Host Cell Cytoplasm.

Kebbi-Beghdadi C, Pilloux L, Martin V, Greub G.

Microorganisms. 2020 Mar 3;8(3). pii: E361. doi: 10.3390/microorganisms8030361.


Human miscarriage and infection in Tunisia: Role of Mycoplasma hominis and high Waddlia seroprevalence.

Smaoui M, Carole K, Sellami H, Kammoun S, Choura K, Maazoun L, Mestiri H, Aeby S, Louati D, Derbel M, Chaabene K, Hammami A, Greub G, Znazen A.

J Infect Dev Ctries. 2019 May 31;13(5):410-418. doi: 10.3855/jidc.9829.


Combining Standard Molecular Typing and Whole Genome Sequencing to Investigate Pseudomonas aeruginosa Epidemiology in Intensive Care Units.

Magalhães B, Valot B, Abdelbary MMH, Prod'hom G, Greub G, Senn L, Blanc DS.

Front Public Health. 2020 Jan 28;8:3. doi: 10.3389/fpubh.2020.00003. eCollection 2020.


Machine Learning Approach for Candida albicans Fluconazole Resistance Detection Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry.

Delavy M, Cerutti L, Croxatto A, Prod'hom G, Sanglard D, Greub G, Coste AT.

Front Microbiol. 2020 Jan 14;10:3000. doi: 10.3389/fmicb.2019.03000. eCollection 2019.


Waddlia chondrophila and Male Infertility.

Baud D, Vulliemoz N, Zapata MVM, Greub G, Vouga M, Stojanov M.

Microorganisms. 2020 Jan 17;8(1). pii: E136. doi: 10.3390/microorganisms8010136.


Trimethylamine-N-Oxide Postprandial Response in Plasma and Urine Is Lower After Fermented Compared to Non-Fermented Dairy Consumption in Healthy Adults.

Burton KJ, Krüger R, Scherz V, Münger LH, Picone G, Vionnet N, Bertelli C, Greub G, Capozzi F, Vergères G.

Nutrients. 2020 Jan 16;12(1). pii: E234. doi: 10.3390/nu12010234.


Diverse Stress-Inducing Treatments cause Distinct Aberrant Body Morphologies in the Chlamydia-Related Bacterium, Waddlia chondrophila.

Scherler A, Jacquier N, Kebbi-Beghdadi C, Greub G.

Microorganisms. 2020 Jan 9;8(1). pii: E89. doi: 10.3390/microorganisms8010089.


Impact of Waddlia chondrophila infection on pregnancy in the mouse.

Baud D, Ammerdorffer A, Buffe Y, Vouga M, Greub G, Stojanov M.

New Microbes New Infect. 2019 Nov 23;33:100619. doi: 10.1016/j.nmni.2019.100619. eCollection 2020 Jan.


A predation assay using amoebae to screen for virulence factors unearthed the first W. chondrophila inclusion membrane protein.

Kebbi-Beghdadi C, Pilloux L, Croxatto A, Tosetti N, Pillonel T, Greub G.

Sci Rep. 2019 Dec 20;9(1):19485. doi: 10.1038/s41598-019-55511-1.


Interactions Screenings Unearth Potential New Divisome Components in the Chlamydia-Related Bacterium, Waddlia chondrophila.

Bayramova F, Jacquier N, Greub G.

Microorganisms. 2019 Nov 26;7(12). pii: E617. doi: 10.3390/microorganisms7120617.


Publisher Correction: Identification of new DNA-associated proteins from Waddlia chondrophila.

de Barsy M, Herrgott L, Martin V, Pillonel T, Viollier PH, Greub G.

Sci Rep. 2019 Nov 5;9(1):16402. doi: 10.1038/s41598-019-53160-y.


ChlamDB: a comparative genomics database of the phylum Chlamydiae and other members of the Planctomycetes-Verrucomicrobiae-Chlamydiae superphylum.

Pillonel T, Tagini F, Bertelli C, Greub G.

Nucleic Acids Res. 2020 Jan 8;48(D1):D526-D534. doi: 10.1093/nar/gkz924.


Evaluation of the BD Phoenix™ CPO Detect Test for the detection of carbapenemase producers.

Croxatto A, Coste AT, Pillonel T, Bertelli C, Greub G, Prod'hom G.

Clin Microbiol Infect. 2019 Oct 18. pii: S1198-743X(19)30529-4. doi: 10.1016/j.cmi.2019.10.002. [Epub ahead of print]


International Committee on Systematics of Prokaryotes (ICSP) Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 20 March 2019, Seattle, WA, USA.

Borel N, Horn M, Greub G.

Int J Syst Evol Microbiol. 2019 Nov;69(11):3654-3656. doi: 10.1099/ijsem.0.003738. No abstract available.


Phenotypic, biochemical and genetic analysis of KPC-41, a KPC-3 variant conferring resistance to ceftazidime-avibactam and exhibiting reduced carbapenemase activity.

Mueller L, Masseron A, Prod'Hom G, Galperine T, Greub G, Poirel L, Nordmann P.

Antimicrob Agents Chemother. 2019 Sep 16. pii: AAC.01111-19. doi: 10.1128/AAC.01111-19. [Epub ahead of print]


Symposium report: One Health meets sequencing.

Egli A, Koch D, Danuser J, Hendriksen RS, Driesen S, Schmid DC, Neher R, Mäusezahl M, Seth-Smith HMB, Bloemberg G, Tschudin-Sutter S, Endimiani A, Perreten V, Greub G, Schrenzel J, Stephan R.

Microbes Infect. 2020 Jan - Feb;22(1):1-7. doi: 10.1016/j.micinf.2019.07.004. Epub 2019 Aug 8. No abstract available.


Whole-genome sequencing for rapid, reliable and routine investigation of Mycobacterium tuberculosis transmission in local communities.

Zakham F, Laurent S, Esteves Carreira AL, Corbaz A, Bertelli C, Masserey E, Nicod L, Greub G, Jaton K, Mazza-Stalder J, Opota O.

New Microbes New Infect. 2019 Jun 29;31:100582. doi: 10.1016/j.nmni.2019.100582. eCollection 2019 Sep.


A SpoIID Homolog Cleaves Glycan Strands at the Chlamydial Division Septum.

Jacquier N, Yadav AK, Pillonel T, Viollier PH, Cava F, Greub G.

mBio. 2019 Jul 16;10(4). pii: e01128-19. doi: 10.1128/mBio.01128-19.


ESCMID/ESGMD postgraduate technical workshop on diagnostic microbiology.

Scherler A, Ardissone S, Moran-Gilad J, Greub G.

Microbes Infect. 2019 Oct - Nov;21(8-9):343-352. doi: 10.1016/j.micinf.2019.04.006. Epub 2019 May 16. No abstract available.


International Committee on Systematics of Prokaryotes (ICSP) Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 5 July 2018, Woudschoten, Zeist, The Netherlands.

Borel N, Greub G.

Int J Syst Evol Microbiol. 2019 Aug;69(8):2606-2608. doi: 10.1099/ijsem.0.003418. Epub 2019 May 7. No abstract available.


Evaluation of three consecutive versions of a commercial rapid PCR test to screen for methicillin-resistant Staphylococcus aureus.

Bulliard E, Grandbastien B, Senn L, Greub G, Blanc DS.

Clin Microbiol Infect. 2019 Nov;25(11):1430.e1-1430.e4. doi: 10.1016/j.cmi.2019.03.029. Epub 2019 Apr 10.


Phylogenomics reveal that Mycobacterium kansasii subtypes are species-level lineages. Description of Mycobacterium pseudokansasii sp. nov., Mycobacterium innocens sp. nov. and Mycobacterium attenuatum sp. nov.

Tagini F, Aeby S, Bertelli C, Droz S, Casanova C, Prod'hom G, Jaton K, Greub G.

Int J Syst Evol Microbiol. 2019 Jun;69(6):1696-1704. doi: 10.1099/ijsem.0.003378. Epub 2019 Apr 4.


Sequencing the Obligate Intracellular Rhabdochlamydia helvetica within Its Tick Host Ixodes ricinus to Investigate Their Symbiotic Relationship.

Pillonel T, Bertelli C, Aeby S, de Barsy M, Jacquier N, Kebbi-Beghdadi C, Mueller L, Vouga M, Greub G.

Genome Biol Evol. 2019 Apr 1;11(4):1334-1344. doi: 10.1093/gbe/evz072.


The rapid molecular test Xpert MTB/RIF ultra: towards improved tuberculosis diagnosis and rifampicin resistance detection.

Opota O, Mazza-Stalder J, Greub G, Jaton K.

Clin Microbiol Infect. 2019 Nov;25(11):1370-1376. doi: 10.1016/j.cmi.2019.03.021. Epub 2019 Mar 28. Review.


Identification of new DNA-associated proteins from Waddlia chondrophila.

de Barsy M, Herrgott L, Martin V, Pillonel T, Viollier PH, Greub G.

Sci Rep. 2019 Mar 20;9(1):4885. doi: 10.1038/s41598-019-40732-1. Erratum in: Sci Rep. 2019 Nov 5;9(1):16402.


Whole-genome sequencing revealed independent emergence of vancomycin-resistant Enterococcus faecium causing sequential outbreaks over 3 years in a tertiary care hospital.

Abdelbary MHH, Senn L, Greub G, Chaillou G, Moulin E, Blanc DS.

Eur J Clin Microbiol Infect Dis. 2019 Jun;38(6):1163-1170. doi: 10.1007/s10096-019-03524-z. Epub 2019 Mar 19.


Molecular diagnosis and enrichment culture identified a septic pseudoarthrosis due to an infection with Erysipelatoclostridium ramosum.

Zakham F, Pillonel T, Brunel AS, Zambelli PY, Greub G, Croxatto A, Bertelli C.

Int J Infect Dis. 2019 Apr;81:167-169. doi: 10.1016/j.ijid.2019.02.001. Epub 2019 Feb 14.


Review of the impact of MALDI-TOF MS in public health and hospital hygiene, 2018.

Rodríguez-Sánchez B, Cercenado E, Coste AT, Greub G.

Euro Surveill. 2019 Jan;24(4). doi: 10.2807/1560-7917.ES.2019.24.4.1800193.


Discovery and Characterization of Mycobacterium basiliense sp. nov., a Nontuberculous Mycobacterium Isolated From Human Lungs.

Seth-Smith HMB, Imkamp F, Tagini F, Cuénod A, Hömke R, Jahn K, Tschacher A, Grendelmeier P, Bättig V, Erb S, Reinhard M, Rütimann G, Borrell S, Gagneux S, Casanova C, Droz S, Osthoff M, Tamm M, Nübel U, Greub G, Keller PM, Egli A.

Front Microbiol. 2019 Jan 8;9:3184. doi: 10.3389/fmicb.2018.03184. eCollection 2018.


Indication of spatially random occurrence of Chlamydia-like organisms in Bufo bufo tadpoles from ponds located in the Geneva metropolitan area.

Vajana E, Widmer I, Rochat E, Duruz S, Selmoni O, Vuilleumier S, Aeby S, Greub G, Joost S.

New Microbes New Infect. 2018 Nov 27;27:54-63. doi: 10.1016/j.nmni.2018.11.006. eCollection 2019 Jan.


Diagnostic stewardship: are we using the right term?

Dyar OJ, Moran-Gilad J, Greub G, Pulcini C; ESGMD Executive Committee and the ESGAP Executive Committee.

Clin Microbiol Infect. 2019 Mar;25(3):272-273. doi: 10.1016/j.cmi.2018.12.011. Epub 2018 Dec 27. No abstract available.


Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform.

Egli A, Blanc DS, Greub G, Keller PM, Lazarevic V, Lebrand A, Leib S, Neher RA, Perreten V, Ramette A, Schrenzel J, Stephan R, Wagner K, Wuethrich D, Xenarios I.

Swiss Med Wkly. 2018 Dec 15;148:w14693. doi: 10.4414/smw.2018.14693. eCollection 2018 Dec 3.


Added Value of Xpert MTB/RIF Ultra for Diagnosis of Pulmonary Tuberculosis in a Low-Prevalence Setting.

Opota O, Zakham F, Mazza-Stalder J, Nicod L, Greub G, Jaton K.

J Clin Microbiol. 2019 Jan 30;57(2). pii: e01717-18. doi: 10.1128/JCM.01717-18. Print 2019 Feb.


Antibodies to Chlamydia trachomatis and reproductive health issues in women with SLE: a case-control study.

Santos A, Greub G, Aeby S, Wunder D, Pantaleo G, Ribi C.

Lupus Sci Med. 2018 Nov 21;5(1):e000293. doi: 10.1136/lupus-2018-000293. eCollection 2018.


Prevalence of Anaplasma phagocytophilum and Coxiella burnetii in Ixodes ricinus ticks in Switzerland: an underestimated epidemiologic risk.

Pilloux L, Baumgartner A, Jaton K, Lienhard R, Ackermann-Gäumann R, Beuret C, Greub G.

New Microbes New Infect. 2018 Sep 6;27:22-26. doi: 10.1016/j.nmni.2018.08.017. eCollection 2019 Jan.


Limited added value of fungal ITS amplicon sequencing in the study of bovine abortion.

Vidal S, Brandt BW, Dettwiler M, Abril C, Bressan J, Greub G, Frey CF, Perreten V, Rodriguez-Campos S.

Heliyon. 2018 Nov 5;4(11):e00915. doi: 10.1016/j.heliyon.2018.e00915. eCollection 2018 Nov.


Reduced Chlorine in Drinking Water Distribution Systems Impacts Bacterial Biodiversity in Biofilms.

Bertelli C, Courtois S, Rosikiewicz M, Piriou P, Aeby S, Robert S, Loret JF, Greub G.

Front Microbiol. 2018 Oct 23;9:2520. doi: 10.3389/fmicb.2018.02520. eCollection 2018.


[Staphylococcus aureus producing Panton-Valentine leukocidin : notions in clinical practice].

Pérez S, Liaudet A, Favrat B, Cornuz J, Greub G.

Rev Med Suisse. 2018 Oct 31;14(625):1946-1950. French.


Host-pathogen biotic interactions shaped vitamin K metabolism in Archaeplastida.

Cenci U, Qiu H, Pillonel T, Cardol P, Remacle C, Colleoni C, Kadouche D, Chabi M, Greub G, Bhattacharya D, Ball SG.

Sci Rep. 2018 Oct 15;8(1):15243. doi: 10.1038/s41598-018-33663-w.


ESCCAR international congress on Rickettsiae and other intracellular bacteria.

Fournier PE, Kebbi-Beghdadi C, Greub G.

Microbes Infect. 2018 Aug - Sep;20(7-8):392-400. doi: 10.1016/j.micinf.2018.08.001. Epub 2018 Oct 10. No abstract available.


International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 7 September 2016, Oxford, UK.

Greub G, Bavoil P.

Int J Syst Evol Microbiol. 2018 Nov;68(11):3683-3684. doi: 10.1099/ijsem.0.003049. Epub 2018 Oct 10. No abstract available.


[Chlamydial infections : epidemiology, pathogenesis, diagnosis and treatments].

Tagini F, Greub G.

Rev Med Suisse. 2018 Sep 12;14(618):1620-1625. French.


Male infertility: the intracellular bacterial hypothesis.

Stojanov M, Baud D, Greub G, Vulliemoz N.

New Microbes New Infect. 2018 Aug 22;26:37-41. doi: 10.1016/j.nmni.2018.08.012. eCollection 2018 Nov. Review.


Metagenomic Analysis of Fish-Associated Ca. Parilichlamydiaceae Reveals Striking Metabolic Similarities to the Terrestrial Chlamydiaceae.

Taylor-Brown A, Pillonel T, Greub G, Vaughan L, Nowak B, Polkinghorne A.

Genome Biol Evol. 2018 Oct 1;10(10):2587-2595. doi: 10.1093/gbe/evy195.


International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 9 April 2017, Charlotte, USA.

Borel N, Bavoil P, Greub G, Horn M.

Int J Syst Evol Microbiol. 2018 Jan;68(1):3369-3370. doi: 10.1099/ijsem.0.003010. Epub 2018 Sep 7. No abstract available.


Distinct Genomic Features Characterize Two Clades of Corynebacterium diphtheriae: Proposal of Corynebacterium diphtheriae Subsp. diphtheriae Subsp. nov. and Corynebacterium diphtheriae Subsp. lausannense Subsp. nov.

Tagini F, Pillonel T, Croxatto A, Bertelli C, Koutsokera A, Lovis A, Greub G.

Front Microbiol. 2018 Aug 17;9:1743. doi: 10.3389/fmicb.2018.01743. eCollection 2018.


Chlamydia, rickettsia and other intracellular bacteria.

Greub G.

Microbes Infect. 2018 Aug - Sep;20(7-8):391. doi: 10.1016/j.micinf.2018.08.002. Epub 2018 Aug 23. No abstract available.


β-Klotho deficiency shifts the gut-liver bile acid axis and induces hepatic alterations in mice.

Somm E, Henry H, Bruce SJ, Bonnet N, Montandon SA, Niederländer NJ, Messina A, Aeby S, Rosikiewicz M, Fajas L, Sempoux C, Ferrari SL, Greub G, Pitteloud N.

Am J Physiol Endocrinol Metab. 2018 Nov 1;315(5):E833-E847. doi: 10.1152/ajpendo.00182.2018. Epub 2018 Jun 26.


Dissemination of antibiotic resistance genes associated with the sporobiota in sediments impacted by wastewater.

Paul C, Bayrychenko Z, Junier T, Filippidou S, Beck K, Bueche M, Greub G, Bürgmann H, Junier P.

PeerJ. 2018 Jun 20;6:e4989. doi: 10.7717/peerj.4989. eCollection 2018.


Genome sequencing and functional characterization of the non-pathogenic Klebsiella pneumoniae KpGe bacteria.

Lima WC, Pillonel T, Bertelli C, Ifrid E, Greub G, Cosson P.

Microbes Infect. 2018 May;20(5):293-301. doi: 10.1016/j.micinf.2018.04.001. Epub 2018 May 10.


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