Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 79

1.

Thorough Performance Evaluation of 213 nm Ultraviolet Photodissociation for Top-down Proteomics.

Fornelli L, Srzentić K, Toby TK, Doubleday PF, Huguet R, Mullen C, Melani RD, Dos Santos Seckler H, DeHart CJ, Weisbrod CR, Durbin KR, Greer JB, Early BP, Fellers RT, Zabrouskov V, Thomas PM, Compton PD, Kelleher NL.

Mol Cell Proteomics. 2020 Feb;19(2):405-420. doi: 10.1074/mcp.TIR119.001638. Epub 2019 Dec 30.

PMID:
31888965
2.

Transcriptomic Responses of Bisphenol S Predict Involvement of Immune Function in the Cardiotoxicity of Early Life-Stage Zebrafish (Danio rerio).

Qiu W, Chen B, Greer JB, Magnuson JT, Xiong Y, Zhong H, Andrzejczyk NE, Zheng C, Schlenk D.

Environ Sci Technol. 2020 Jan 9. doi: 10.1021/acs.est.9b06213. [Epub ahead of print]

PMID:
31888327
3.

Proton Transfer Charge Reduction Enables High-Throughput Top-Down Analysis of Large Proteoforms.

Huguet R, Mullen C, Srzentić K, Greer JB, Fellers RT, Zabrouskov V, Syka JEP, Kelleher NL, Fornelli L.

Anal Chem. 2019 Dec 17;91(24):15732-15739. doi: 10.1021/acs.analchem.9b03925. Epub 2019 Nov 22.

PMID:
31714757
4.

Multidimensional Top-Down Proteomics of Brain-Region-Specific Mouse Brain Proteoforms Responsive to Cocaine and Estradiol.

Park HM, Satta R, Davis RG, Goo YA, LeDuc RD, Fellers RT, Greer JB, Romanova EV, Rubakhin SS, Tai R, Thomas PM, Sweedler JV, Kelleher NL, Patrie SM, Lasek AW.

J Proteome Res. 2019 Nov 1;18(11):3999-4012. doi: 10.1021/acs.jproteome.9b00481. Epub 2019 Oct 2.

PMID:
31550894
5.

Effects of Chlorpyrifos on Cholinesterase and Serine Lipase Activities and Lipid Metabolism in Brains of Rainbow Trout (Oncorhynchus mykiss).

Greer JB, Magnuson JT, Hester K, Giroux M, Pope C, Anderson T, Liu J, Dang V, Denslow ND, Schlenk D.

Toxicol Sci. 2019 Jul 30. pii: kfz167. doi: 10.1093/toxsci/kfz167. [Epub ahead of print]

PMID:
31359069
6.

Effects of corexit 9500A and Corexit-crude oil mixtures on transcriptomic pathways and developmental toxicity in early life stage mahi-mahi (Coryphaena hippurus).

Greer JB, Pasparakis C, Stieglitz JD, Benetti D, Grosell M, Schlenk D.

Aquat Toxicol. 2019 Jul;212:233-240. doi: 10.1016/j.aquatox.2019.05.014. Epub 2019 May 23.

PMID:
31146055
7.

Altered expression of ionotropic L-Glutamate receptors in aged sensory neurons of Aplysia californica.

Greer JB, Mager EM, Fieber LA.

PLoS One. 2019 May 23;14(5):e0217300. doi: 10.1371/journal.pone.0217300. eCollection 2019.

8.

Csf1r or Mer inhibition delays liver regeneration via suppression of Kupffer cells.

Santamaria-Barria JA, Zeng S, Greer JB, Beckman MJ, Seifert AM, Cohen NA, Zhang JQ, Crawley MH, Green BL, Loo JK, Maltbaek JH, DeMatteo RP.

PLoS One. 2019 May 1;14(5):e0216275. doi: 10.1371/journal.pone.0216275. eCollection 2019.

9.

Clonal diversity impacts coral cover in Acropora cervicornisthickets: Potential relationships between density, growth, and polymorphisms.

Drury C, Greer JB, Baums I, Gintert B, Lirman D.

Ecol Evol. 2019 Mar 29;9(8):4518-4531. doi: 10.1002/ece3.5035. eCollection 2019 Apr.

10.

Primary Tumor Sidedness is Predictive of Survival in Colon Cancer Patients Treated with Cytoreductive Surgery With or Without Hyperthermic Intraperitoneal Chemotherapy: A US HIPEC Collaborative Study.

Kotha NV, Baumgartner JM, Veerapong J, Cloyd JM, Ahmed A, Grotz TE, Leiting JL, Fournier K, Lee AJ, Dineen SP, Dessureault S, Clarke C, Mogal H, Zaidi MY, Russell MC, Patel SH, Sussman JJ, Dhar V, Lambert LA, Hendrix RJ, Abbott DE, Pokrzywa C, Lafaro K, Lee B, Greer JB, Fackche N, Lowy AM, Kelly KJ.

Ann Surg Oncol. 2019 Jul;26(7):2234-2240. doi: 10.1245/s10434-019-07373-0. Epub 2019 Apr 23.

PMID:
31016486
11.

Deepwater Horizon crude oil exposure alters cholesterol biosynthesis with implications for developmental cardiotoxicity in larval mahi-mahi (Coryphaena hippurus).

McGruer V, Pasparakis C, Grosell M, Stieglitz JD, Benetti DD, Greer JB, Schlenk D.

Comp Biochem Physiol C Toxicol Pharmacol. 2019 Jun;220:31-35. doi: 10.1016/j.cbpc.2019.03.001. Epub 2019 Mar 6.

PMID:
30851416
12.

Accurate Estimation of Context-Dependent False Discovery Rates in Top-Down Proteomics.

LeDuc RD, Fellers RT, Early BP, Greer JB, Shams DP, Thomas PM, Kelleher NL.

Mol Cell Proteomics. 2019 Apr;18(4):796-805. doi: 10.1074/mcp.RA118.000993. Epub 2019 Jan 15.

PMID:
30647073
13.

Association Between Endoscopist Personality and Rate of Adenoma Detection.

Ezaz G, Leffler DA, Beach S, Schoen RE, Crockett SD, Gourevitch RA, Rose S, Morris M, Carrell DS, Greer JB, Mehrotra A.

Clin Gastroenterol Hepatol. 2019 Jul;17(8):1571-1579.e7. doi: 10.1016/j.cgh.2018.10.019. Epub 2018 Oct 13.

PMID:
30326300
14.

Nutrition and Inflammatory Biomarkers in Chronic Pancreatitis Patients.

Greer JB, Greer P, Sandhu BS, Alkaade S, Wilcox CM, Anderson MA, Sherman S, Gardner TB, Lewis MD, Guda NM, Muniraj T, Conwell D, Cote GA, Forsmark CE, Banks PA, Tang G, Stello K, Gelrud A, Brand RE, Slivka A, Whitcomb DC, Yadav D.

Nutr Clin Pract. 2019 Jun;34(3):387-399. doi: 10.1002/ncp.10186. Epub 2018 Aug 13.

15.

Whole-transcriptome changes in gene expression accompany aging of sensory neurons in Aplysia californica.

Greer JB, Schmale MC, Fieber LA.

BMC Genomics. 2018 Jul 11;19(1):529. doi: 10.1186/s12864-018-4909-1.

16.

The Value of Activated Ion Electron Transfer Dissociation for High-Throughput Top-Down Characterization of Intact Proteins.

Riley NM, Sikora JW, Seckler HS, Greer JB, Fellers RT, LeDuc RD, Westphall MS, Thomas PM, Kelleher NL, Coon JJ.

Anal Chem. 2018 Jul 17;90(14):8553-8560. doi: 10.1021/acs.analchem.8b01638. Epub 2018 Jul 5.

17.

Endoscopist factors that influence serrated polyp detection: a multicenter study.

Crockett SD, Gourevitch RA, Morris M, Carrell DS, Rose S, Shi Z, Greer JB, Schoen RE, Mehrotra A.

Endoscopy. 2018 Oct;50(10):984-992. doi: 10.1055/a-0597-1740. Epub 2018 Apr 24.

18.

IBD LIVE Case Series: Case 9: Do Race and Extraintestinal Manifestations Affect Treatment of Severe Crohn's Colitis?

Proksell SS, Greer JB, Theisen BK, Davis PL, Rosh JR, Keljo DJ, Goyal A, Shah SA, Brand MH, Herfarth HH, Cross RK, Siegel CA, Koltun WA, Isaacs KL, Regueiro MD.

Inflamm Bowel Dis. 2018 Mar 19;24(4):698-713. doi: 10.1093/ibd/izx114. No abstract available.

PMID:
29562279
19.

A comparison of hatchery-rearing in exercise to wild animal physiology and reflex behavior in Aplysia californica.

Fieber LA, Kron NS, Greer JB, Rooney H, Prostko RA, Stieglitz JD, Grosell M, Gillette PR.

Comp Biochem Physiol A Mol Integr Physiol. 2018 Jul;221:24-31. doi: 10.1016/j.cbpa.2018.03.006. Epub 2018 Mar 17.

20.

Top-Down Proteomics Enables Comparative Analysis of Brain Proteoforms Between Mouse Strains.

Davis RG, Park HM, Kim K, Greer JB, Fellers RT, LeDuc RD, Romanova EV, Rubakhin SS, Zombeck JA, Wu C, Yau PM, Gao P, van Nispen AJ, Patrie SM, Thomas PM, Sweedler JV, Rhodes JS, Kelleher NL.

Anal Chem. 2018 Mar 20;90(6):3802-3810. doi: 10.1021/acs.analchem.7b04108. Epub 2018 Feb 26.

21.

Variation in Pathologist Classification of Colorectal Adenomas and Serrated Polyps.

Gourevitch RA, Rose S, Crockett SD, Morris M, Carrell DS, Greer JB, Pai RK, Schoen RE, Mehrotra A.

Am J Gastroenterol. 2018 Mar;113(3):431-439. doi: 10.1038/ajg.2017.496. Epub 2018 Jan 30.

22.

IBD LIVE Series-Case 8: Treatment Options for Refractory Esophageal Crohn's Disease and Hidradenitis Suppurativa.

Iskandar H, Greer JB, Krasinskas AM, Tinsley AT, Koltun WA, Siegel CA, Levy LC, Herfarth HH, Farraye FA, Binion DG, Rosh JR, Keljo DJ, Isaacs KL, Regueiro MD.

Inflamm Bowel Dis. 2017 Oct;23(10):1667-1677. doi: 10.1097/MIB.0000000000001266. No abstract available. Erratum in: Inflamm Bowel Dis. 2017 Nov;23(11):E56.

PMID:
28906288
23.

Physician characteristics associated with higher adenoma detection rate.

Mehrotra A, Morris M, Gourevitch RA, Carrell DS, Leffler DA, Rose S, Greer JB, Crockett SD, Baer A, Schoen RE.

Gastrointest Endosc. 2018 Mar;87(3):778-786.e5. doi: 10.1016/j.gie.2017.08.023. Epub 2017 Sep 1.

24.

Genome and transcriptome profiling of fibrolamellar hepatocellular carcinoma demonstrates p53 and IGF2BP1 dysregulation.

Sorenson EC, Khanin R, Bamboat ZM, Cavnar MJ, Kim TS, Sadot E, Zeng S, Greer JB, Seifert AM, Cohen NA, Crawley MH, Green BL, Klimstra DS, DeMatteo RP.

PLoS One. 2017 May 9;12(5):e0176562. doi: 10.1371/journal.pone.0176562. eCollection 2017.

25.

IBD LIVE Series-Case 7: The Brain-Gut Connection and the Importance of Integrated Care in IBD.

Click BH, Greer JB, Regueiro MD, Hartman DJ, Davis PL, Siegel CA, Herfarth HH, Rosh JR, Shah SA, Koltun WA, Binion DG, Baidoo L, Szigethy E.

Inflamm Bowel Dis. 2017 May;23(5):681-694. doi: 10.1097/MIB.0000000000001101. No abstract available.

PMID:
28426450
26.

High-Throughput Analysis of Intact Human Proteins Using UVPD and HCD on an Orbitrap Mass Spectrometer.

Cleland TP, DeHart CJ, Fellers RT, VanNispen AJ, Greer JB, LeDuc RD, Parker WR, Thomas PM, Kelleher NL, Brodbelt JS.

J Proteome Res. 2017 May 5;16(5):2072-2079. doi: 10.1021/acs.jproteome.7b00043. Epub 2017 Apr 19.

27.

Management and outcomes of acute pancreatitis patients over the last decade: A US tertiary-center experience.

Koutroumpakis E, Slivka A, Furlan A, Dasyam AK, Dudekula A, Greer JB, Whitcomb DC, Yadav D, Papachristou GI.

Pancreatology. 2017 Jan - Feb;17(1):32-40. doi: 10.1016/j.pan.2016.10.011. Epub 2016 Oct 24.

PMID:
28341116
28.

Advancing Top-down Analysis of the Human Proteome Using a Benchtop Quadrupole-Orbitrap Mass Spectrometer.

Fornelli L, Durbin KR, Fellers RT, Early BP, Greer JB, LeDuc RD, Compton PD, Kelleher NL.

J Proteome Res. 2017 Feb 3;16(2):609-618. doi: 10.1021/acs.jproteome.6b00698. Epub 2016 Dec 2.

29.

Phylogenetic analysis of ionotropic L-glutamate receptor genes in the Bilateria, with special notes on Aplysia californica.

Greer JB, Khuri S, Fieber LA.

BMC Evol Biol. 2017 Jan 11;17(1):11. doi: 10.1186/s12862-016-0871-1.

30.

Identification and Characterization of Human Proteoforms by Top-Down LC-21 Tesla FT-ICR Mass Spectrometry.

Anderson LC, DeHart CJ, Kaiser NK, Fellers RT, Smith DF, Greer JB, LeDuc RD, Blakney GT, Thomas PM, Kelleher NL, Hendrickson CL.

J Proteome Res. 2017 Feb 3;16(2):1087-1096. doi: 10.1021/acs.jproteome.6b00696. Epub 2016 Dec 12.

31.

American Gastroenterological Association Institute Technical Review on the Management of Crohn's Disease After Surgical Resection.

Regueiro M, Velayos F, Greer JB, Bougatsos C, Chou R, Sultan S, Singh S.

Gastroenterology. 2017 Jan;152(1):277-295.e3. doi: 10.1053/j.gastro.2016.10.039. Epub 2016 Nov 10. No abstract available.

PMID:
27840073
32.

Etiology and Treatment of Pain and Psychosocial Issues in Patients With Inflammatory Bowel Diseases.

Regueiro M, Greer JB, Szigethy E.

Gastroenterology. 2017 Feb;152(2):430-439.e4. doi: 10.1053/j.gastro.2016.10.036. Epub 2016 Nov 2. Review.

PMID:
27816599
33.

IBD LIVE Case Series-Case 6.

Rajan D, Greer JB, Regueiro MD, Baidoo L, Binion DG, Herfarth HH, Siegel CA, Hartman DJ, Farraye FA, Koutroubakis IE, Brand MH, Williams ED, Goyal A, Cross RK.

Inflamm Bowel Dis. 2016 Nov;22(11):2754-2764. No abstract available.

PMID:
27755273
34.

IBD LIVE Case Series-Case 5: The Many Faces of Cytomegalovirus in Inflammatory Bowel Disease.

Abdul-Baki H, Greer JB, Binion DG, Kermanshahi TR, Brand MH, Williams ED, Bensen SP, Holubar SD, Keljo DJ, Regueiro MD.

Inflamm Bowel Dis. 2016 Sep;22(9):2245-54. doi: 10.1097/MIB.0000000000000843. No abstract available.

PMID:
27542136
35.

IBD LIVE Case Series-Case 4: Worms in IBD: Friend or Foe.

Gulati A, Clarke K, Greer JB, Binion DG, Brand MH, Farraye FA, Cross RK, Baidoo L, Schraut WH, Hartman DJ, Regueiro MD.

Inflamm Bowel Dis. 2016 Jun;22(6):1462-72. doi: 10.1097/MIB.0000000000000770. No abstract available.

PMID:
27182771
36.

The Inflammatory Bowel Disease Specialty Medical Home: A New Model of Patient-centered Care.

Regueiro MD, McAnallen SE, Greer JB, Perkins SE, Ramalingam S, Szigethy E.

Inflamm Bowel Dis. 2016 Aug;22(8):1971-80. doi: 10.1097/MIB.0000000000000819.

PMID:
27135486
37.

Spectrum and Classification of Cystic Neoplasms of the Pancreas.

Greer JB, Ferrone CR.

Surg Oncol Clin N Am. 2016 Apr;25(2):339-50. doi: 10.1016/j.soc.2015.11.002. Review.

PMID:
27013368
38.

Chronic pancreatitis: An international draft consensus proposal for a new mechanistic definition.

Whitcomb DC, Frulloni L, Garg P, Greer JB, Schneider A, Yadav D, Shimosegawa T.

Pancreatology. 2016 Mar-Apr;16(2):218-24. doi: 10.1016/j.pan.2016.02.001. Epub 2016 Feb 16.

39.

An informatic framework for decoding protein complexes by top-down mass spectrometry.

Skinner OS, Havugimana PC, Haverland NA, Fornelli L, Early BP, Greer JB, Fellers RT, Durbin KR, Do Vale LH, Melani RD, Seckler HS, Nelp MT, Belov ME, Horning SR, Makarov AA, LeDuc RD, Bandarian V, Compton PD, Kelleher NL.

Nat Methods. 2016 Mar;13(3):237-40. doi: 10.1038/nmeth.3731. Epub 2016 Jan 18.

40.

IBD LIVE Case Series--Case 3: Very Early-Onset Inflammatory Bowel Disease: When Genetic Testing Proves Beneficial.

Sunseri WM, Kugathasan S, Keljo DJ, Greer JB, Ranganathan S, Cross RK, Siegel CA, Regueiro MD.

Inflamm Bowel Dis. 2015 Dec;21(12):2958-68. doi: 10.1097/MIB.0000000000000650. No abstract available.

PMID:
26583935
41.

Epidemiologic and Mechanistic Associations Between Smoking and Pancreatitis.

Greer JB, Thrower E, Yadav D.

Curr Treat Options Gastroenterol. 2015 Sep;13(3):332-46. doi: 10.1007/s11938-015-0056-9.

42.

IBD LIVE Case Series-Case 2: Previous Cancer in a Patient with Crohn's Disease: Is It Appropriate to Use Biologics and Immunosuppressants for IBD Treatment?

Le PN, Greer JB, Oikonomou I, Schraut WH, Siegel CA, Cross RK, Holubar SD, Tinsley A, Koltun WA, Binion DG, Regueiro MD.

Inflamm Bowel Dis. 2015 Jun;21(6):1401-6. doi: 10.1097/MIB.0000000000000435. No abstract available.

43.

Pharmacological Inhibition of KIT Activates MET Signaling in Gastrointestinal Stromal Tumors.

Cohen NA, Zeng S, Seifert AM, Kim TS, Sorenson EC, Greer JB, Beckman MJ, Santamaria-Barria JA, Crawley MH, Green BL, Rossi F, Besmer P, Antonescu CR, DeMatteo RP.

Cancer Res. 2015 May 15;75(10):2061-70. doi: 10.1158/0008-5472.CAN-14-2564. Epub 2015 Apr 2.

44.

ProSight Lite: graphical software to analyze top-down mass spectrometry data.

Fellers RT, Greer JB, Early BP, Yu X, LeDuc RD, Kelleher NL, Thomas PM.

Proteomics. 2015 Apr;15(7):1235-8. doi: 10.1002/pmic.201570050.

45.

IBD LIVE case series-case 1: smoking, a controversial but effective treatment for ulcerative colitis.

Iskandar H, Greer JB, Schraut WH, Regueiro MD, Davis PL, Hartman DJ, Siegel CA, Herfarth HH, Williams ED, Schwartz MB.

Inflamm Bowel Dis. 2014 Oct;20(10):1696-701. doi: 10.1097/MIB.0000000000000188. No abstract available.

PMID:
25167214
46.

The inflammatory bowel disease live interinstitutional and interdisciplinary videoconference education (IBD LIVE) series.

Regueiro MD, Greer JB, Binion DG, Schraut WH, Goyal A, Keljo DJ, Cross RK, Williams ED, Herfarth HH, Siegel CA, Oikonomou I, Brand MH, Hartman DJ, Tublin ME, Davis PL, Baidoo L, Szigethy E, Watson AR; IBD LIVE Physician Group.

Inflamm Bowel Dis. 2014 Oct;20(10):1687-95. doi: 10.1097/MIB.0000000000000187.

PMID:
25167213
47.

The C-score: a Bayesian framework to sharply improve proteoform scoring in high-throughput top down proteomics.

LeDuc RD, Fellers RT, Early BP, Greer JB, Thomas PM, Kelleher NL.

J Proteome Res. 2014 Jul 3;13(7):3231-40. doi: 10.1021/pr401277r. Epub 2014 Jun 12.

48.

Increased KIT inhibition enhances therapeutic efficacy in gastrointestinal stromal tumor.

Kim TS, Cavnar MJ, Cohen NA, Sorenson EC, Greer JB, Seifert AM, Crawley MH, Green BL, Popow R, Pillarsetty N, Veach DR, Ku AT, Rossi F, Besmer P, Antonescu CR, Zeng S, Dematteo RP.

Clin Cancer Res. 2014 May 1;20(9):2350-62. doi: 10.1158/1078-0432.CCR-13-3033. Epub 2014 Feb 28.

49.

Total pancreatectomy and islet autotransplantation in chronic pancreatitis: recommendations from PancreasFest.

Bellin MD, Freeman ML, Gelrud A, Slivka A, Clavel A, Humar A, Schwarzenberg SJ, Lowe ME, Rickels MR, Whitcomb DC, Matthews JB; PancreasFest Recommendation Conference Participants, Amann S, Andersen DK, Anderson MA, Baillie J, Block G, Brand R, Chari S, Cook M, Cote GA, Dunn T, Frulloni L, Greer JB, Hollingsworth MA, Kim KM, Larson A, Lerch MM, Lin T, Muniraj T, Robertson RP, Sclair S, Singh S, Stopczynski R, Toledo FG, Wilcox CM, Windsor J, Yadav D.

Pancreatology. 2014 Jan-Feb;14(1):27-35. doi: 10.1016/j.pan.2013.10.009. Epub 2013 Nov 13.

50.

KIT oncogene inhibition drives intratumoral macrophage M2 polarization.

Cavnar MJ, Zeng S, Kim TS, Sorenson EC, Ocuin LM, Balachandran VP, Seifert AM, Greer JB, Popow R, Crawley MH, Cohen NA, Green BL, Rossi F, Besmer P, Antonescu CR, DeMatteo RP.

J Exp Med. 2013 Dec 16;210(13):2873-86. doi: 10.1084/jem.20130875. Epub 2013 Dec 9.

Supplemental Content

Loading ...
Support Center