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Items: 1 to 50 of 243

1.

Do all HEART Scores beat the same: evaluating the interoperator reliability of the HEART Score.

Niven WGP, Wilson D, Goodacre S, Robertson A, Green SJ, Harris T.

Emerg Med J. 2018 Sep 14. pii: emermed-2018-207540. doi: 10.1136/emermed-2018-207540. [Epub ahead of print]

2.

Association of nasal microbiome and asthma control in patients with chronic rhinosinusitis.

Yang HJ, LoSavio PS, Engen PA, Naqib A, Mehta A, Kota R, Khan RJ, Tobin MC, Green SJ, Schleimer RP, Keshavarzian A, Batra PS, Mahdavinia M.

Clin Exp Allergy. 2018 Aug 20. doi: 10.1111/cea.13255. [Epub ahead of print] No abstract available.

PMID:
30126004
3.

Complete Genome of Micromonospora sp. Strain B006 Reveals Biosynthetic Potential of a Lake Michigan Actinomycete.

Braesel J, Crnkovic CM, Kunstman KJ, Green SJ, Maienschein-Cline M, Orjala J, Murphy BT, Eustáquio AS.

J Nat Prod. 2018 Aug 15. doi: 10.1021/acs.jnatprod.8b00394. [Epub ahead of print]

PMID:
30110167
4.

Gut bacterial composition in a mouse model of Parkinson's disease.

Perez-Pardo P, Dodiya HB, Engen PA, Naqib A, Forsyth CB, Green SJ, Garssen J, Keshavarzian A, Kraneveld AD.

Benef Microbes. 2018 Sep 18;9(5):799-814. doi: 10.3920/BM2017.0202. Epub 2018 Aug 13.

PMID:
30099890
5.

Assessing the Efficiency of Cultivation Techniques To Recover Natural Product Biosynthetic Gene Populations from Sediment.

Elfeki M, Alanjary M, Green SJ, Ziemert N, Murphy BT.

ACS Chem Biol. 2018 Aug 17;13(8):2074-2081. doi: 10.1021/acschembio.8b00254. Epub 2018 Jul 10.

PMID:
29932624
6.

Draft Genome Sequence of Muricauda sp. Strain K001 Isolated from a Marine Cyanobacterial Culture.

Vizzotto CS, Lopes FAC, Green SJ, Steindorff AS, Walter JM, Thompson FL, Krüger RH.

Genome Announc. 2018 May 31;6(22). pii: e00451-18. doi: 10.1128/genomeA.00451-18.

7.

Making and Sequencing Heavily Multiplexed, High-Throughput 16S Ribosomal RNA Gene Amplicon Libraries Using a Flexible, Two-Stage PCR Protocol.

Naqib A, Poggi S, Wang W, Hyde M, Kunstman K, Green SJ.

Methods Mol Biol. 2018;1783:149-169. doi: 10.1007/978-1-4939-7834-2_7.

PMID:
29767361
8.

Ketogenic diet enhances neurovascular function with altered gut microbiome in young healthy mice.

Ma D, Wang AC, Parikh I, Green SJ, Hoffman JD, Chlipala G, Murphy MP, Sokola BS, Bauer B, Hartz AMS, Lin AL.

Sci Rep. 2018 Apr 27;8(1):6670. doi: 10.1038/s41598-018-25190-5.

9.

Effects of green tea on miRNA and microbiome of oral epithelium.

Adami GR, Tangney CC, Tang JL, Zhou Y, Ghaffari S, Naqib A, Sinha S, Green SJ, Schwartz JL.

Sci Rep. 2018 Apr 12;8(1):5873. doi: 10.1038/s41598-018-22994-3.

10.

Gut microbiota varies by opioid use, circulating leptin and oxytocin in African American men with diabetes and high burden of chronic disease.

Barengolts E, Green SJ, Eisenberg Y, Akbar A, Reddivari B, Layden BT, Dugas L, Chlipala G.

PLoS One. 2018 Mar 29;13(3):e0194171. doi: 10.1371/journal.pone.0194171. eCollection 2018.

11.

Human milk oligosaccharides protect against the development of autoimmune diabetes in NOD-mice.

Xiao L, Van't Land B, Engen PA, Naqib A, Green SJ, Nato A, Leusink-Muis T, Garssen J, Keshavarzian A, Stahl B, Folkerts G.

Sci Rep. 2018 Mar 1;8(1):3829. doi: 10.1038/s41598-018-22052-y.

12.

Dietary Fiber Treatment Corrects the Composition of Gut Microbiota, Promotes SCFA Production, and Suppresses Colon Carcinogenesis.

Bishehsari F, Engen PA, Preite NZ, Tuncil YE, Naqib A, Shaikh M, Rossi M, Wilber S, Green SJ, Hamaker BR, Khazaie K, Voigt RM, Forsyth CB, Keshavarzian A.

Genes (Basel). 2018 Feb 16;9(2). pii: E102. doi: 10.3390/genes9020102.

13.

The nasal microbiome in patients with chronic rhinosinusitis: Analyzing the effects of atopy and bacterial functional pathways in 111 patients.

Mahdavinia M, Engen PA, LoSavio PS, Naqib A, Khan RJ, Tobin MC, Mehta A, Kota R, Preite NZ, Codispoti CD, Tajudeen BA, Schleimer RP, Green SJ, Keshavarzian A, Batra PS.

J Allergy Clin Immunol. 2018 Jul;142(1):287-290.e4. doi: 10.1016/j.jaci.2018.01.033. Epub 2018 Feb 13. No abstract available.

PMID:
29452201
14.

Timing of food intake impacts daily rhythms of human salivary microbiota: a randomized, crossover study.

Collado MC, Engen PA, Bandín C, Cabrera-Rubio R, Voigt RM, Green SJ, Naqib A, Keshavarzian A, Scheer FAJL, Garaulet M.

FASEB J. 2018 Apr;32(4):2060-2072. doi: 10.1096/fj.201700697RR. Epub 2018 Jan 5.

PMID:
29233857
15.

Diazotroph Community Characterization via a High-Throughput nifH Amplicon Sequencing and Analysis Pipeline.

Gaby JC, Rishishwar L, Valderrama-Aguirre LC, Green SJ, Valderrama-Aguirre A, Jordan IK, Kostka JE.

Appl Environ Microbiol. 2018 Jan 31;84(4). pii: e01512-17. doi: 10.1128/AEM.01512-17. Print 2018 Feb 15.

16.

Microbial Diversity of Genital Ulcers of HSV-2 Seropositive Women.

Mehta SD, Pradhan AK, Green SJ, Naqib A, Odoyo-June E, Gaydos CA, Barry S, Landay A, Bailey RC.

Sci Rep. 2017 Nov 13;7(1):15475. doi: 10.1038/s41598-017-15554-8.

17.

Age Drives Distortion of Brain Metabolic, Vascular and Cognitive Functions, and the Gut Microbiome.

Hoffman JD, Parikh I, Green SJ, Chlipala G, Mohney RP, Keaton M, Bauer B, Hartz AMS, Lin AL.

Front Aging Neurosci. 2017 Sep 25;9:298. doi: 10.3389/fnagi.2017.00298. eCollection 2017.

18.

Starch-entrapped microsphere fibers improve bowel habit but do not exhibit prebiotic capacity in those with unsatisfactory bowel habits: a phase I, randomized, double-blind, controlled human trial.

Rasmussen HE, Hamaker B, Rajan KB, Mutlu E, Green SJ, Brown M, Kaur A, Keshavarzian A.

Nutr Res. 2017 Aug;44:27-37. doi: 10.1016/j.nutres.2017.05.015. Epub 2017 Jun 2.

19.

The TLR9 agonist MGN1703 triggers a potent type I interferon response in the sigmoid colon.

Krarup AR, Abdel-Mohsen M, Schleimann MH, Vibholm L, Engen PA, Dige A, Wittig B, Schmidt M, Green SJ, Naqib A, Keshavarzian A, Deng X, Olesen R, Petersen AM, Benfield T, Østergaard L, Rasmussen TA, Agnholt J, Nyengaard JR, Landay A, Søgaard OS, Pillai SK, Tolstrup M, Denton PW.

Mucosal Immunol. 2018 Mar;11(2):449-461. doi: 10.1038/mi.2017.59. Epub 2017 Aug 2.

20.

Investigation of Respiratory Syncytial Virus Outbreak on an Adult Stem Cell Transplant Unit by Use of Whole-Genome Sequencing.

Zhu Y, Zembower TR, Metzger KE, Lei Z, Green SJ, Qi C.

J Clin Microbiol. 2017 Oct;55(10):2956-2963. doi: 10.1128/JCM.00360-17. Epub 2017 Jul 26.

21.

Atopic dermatitis and food sensitization in South African toddlers: Role of fiber and gut microbiota.

Mahdavinia M, Rasmussen HE, Engen P, Van den Berg JP, Davis E, Engen K, Green SJ, Naqib A, Botha M, Gray C, Lunjani N, Hlela C, Basera W, Hobane L, Watkins A, Tobin MC, Landay A, Keshavarzian A, Levin ME.

Ann Allergy Asthma Immunol. 2017 Jun;118(6):742-743.e3. doi: 10.1016/j.anai.2017.04.011. No abstract available.

PMID:
28583264
22.

Genomic and Epidemiological Evidence for Community Origins of Hospital-Onset Methicillin-Resistant Staphylococcus aureus Bloodstream Infections.

Popovich KJ, Snitkin ES, Hota B, Green SJ, Pirani A, Aroutcheva A, Weinstein RA.

J Infect Dis. 2017 Jun 1;215(11):1640-1647. doi: 10.1093/infdis/jiw647.

23.

Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).

Tighe S, Afshinnekoo E, Rock TM, McGrath K, Alexander N, McIntyre A, Ahsanuddin S, Bezdan D, Green SJ, Joye S, Stewart Johnson S, Baldwin DA, Bivens N, Ajami N, Carmical JR, Herriott IC, Colwell R, Donia M, Foox J, Greenfield N, Hunter T, Hoffman J, Hyman J, Jorgensen E, Krawczyk D, Lee J, Levy S, Garcia-Reyero N, Settles M, Thomas K, Gómez F, Schriml L, Kyrpides N, Zaikova E, Penterman J, Mason CE.

J Biomol Tech. 2017 Apr;28(1):31-39. doi: 10.7171/jbt.17-2801-004. Epub 2017 Mar 10. Erratum in: J Biomol Tech. 2017 Jul;28(2):93.

24.

Thoracic electrical bioimpedance versus suprasternal Doppler in emergency care.

Elwan MH, Hue J, Green SJ, Eltahan SM, Sims MR, Coats TJ.

Emerg Med Australas. 2017 Aug;29(4):391-393. doi: 10.1111/1742-6723.12765. Epub 2017 Mar 20.

PMID:
28320068
25.

Hepatic deficiency of the pioneer transcription factor FoxA restricts hepatitis B virus biosynthesis by the developmental regulation of viral DNA methylation.

McFadden VC, Shalaby RE, Iram S, Oropeza CE, Landolfi JA, Lyubimov AV, Maienschein-Cline M, Green SJ, Kaestner KH, McLachlan A.

PLoS Pathog. 2017 Feb 24;13(2):e1006239. doi: 10.1371/journal.ppat.1006239. eCollection 2017 Feb.

26.

The Potential Role of Gut-Derived Inflammation in Multiple System Atrophy.

Engen PA, Dodiya HB, Naqib A, Forsyth CB, Green SJ, Voigt RM, Kordower JH, Mutlu EA, Shannon KM, Keshavarzian A.

J Parkinsons Dis. 2017;7(2):331-346. doi: 10.3233/JPD-160991.

PMID:
28234259
27.

Circadian Rhythm and the Gut Microbiome.

Voigt RM, Forsyth CB, Green SJ, Engen PA, Keshavarzian A.

Int Rev Neurobiol. 2016;131:193-205. doi: 10.1016/bs.irn.2016.07.002. Epub 2016 Sep 6. Review.

PMID:
27793218
28.

Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation.

Pathak A, Chauhan A, Blom J, Indest KJ, Jung CM, Stothard P, Bera G, Green SJ, Ogram A.

PLoS One. 2016 Aug 17;11(8):e0161032. doi: 10.1371/journal.pone.0161032. eCollection 2016.

29.
30.

Clinical presentation, treatment and outcome of focal segmental glomerulosclerosis in Far North Queensland Australian adults.

Greenwood AM, Gunnarsson R, Neuen BL, Oliver K, Green SJ, Baer RA.

Nephrology (Carlton). 2017 Jul;22(7):520-530. doi: 10.1111/nep.12816.

PMID:
27170059
31.

Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community.

Hemme CL, Green SJ, Rishishwar L, Prakash O, Pettenato A, Chakraborty R, Deutschbauer AM, Van Nostrand JD, Wu L, He Z, Jordan IK, Hazen TC, Arkin AP, Kostka JE, Zhou J.

MBio. 2016 Apr 5;7(2):e02234-15. doi: 10.1128/mBio.02234-15.

32.

The Circadian Clock Mutation Promotes Intestinal Dysbiosis.

Voigt RM, Summa KC, Forsyth CB, Green SJ, Engen P, Naqib A, Vitaterna MH, Turek FW, Keshavarzian A.

Alcohol Clin Exp Res. 2016 Feb;40(2):335-47. doi: 10.1111/acer.12943.

33.

Formation of tunable graphene oxide coating with high adhesion.

Lin L, Wu H, Green SJ, Crompton J, Zhang S, Horsell DW.

Phys Chem Chem Phys. 2016 Feb 21;18(7):5086-90. doi: 10.1039/c5cp06906h.

PMID:
26814138
34.

The Gastrointestinal Microbiome: Alcohol Effects on the Composition of Intestinal Microbiota.

Engen PA, Green SJ, Voigt RM, Forsyth CB, Keshavarzian A.

Alcohol Res. 2015;37(2):223-36. Review.

35.

Response to Valderrama and Fields: effect of temperature on biomass production in models of invasive lionfish control.

Green SJ, Dulvy NK, Côté IM, Brooks AM, Miller SE, Akins JL, Cooper AB.

Ecol Appl. 2015 Oct;25(7):2048-50. No abstract available.

PMID:
26591469
36.

Correction to Scientific Evidence Supports a Ban on Microbeads.

Rochman CM, Kross SM, Armstrong JB, Bogan MT, Darling ES, Green SJ, Smyth AR, Veríssimo D.

Environ Sci Technol. 2015 Dec 15;49(24):14740. doi: 10.1021/acs.est.5b05043. Epub 2015 Nov 13. No abstract available.

PMID:
26565431
37.

Draft Genome Sequence of the Pathogenic Bacterium Vibrio vulnificus V252 Biotype 1, Isolated in Israel.

Efimov V, Danin-Poleg Y, Green SJ, Elgavish S, Kashi Y.

Genome Announc. 2015 Oct 15;3(5). pii: e01182-15. doi: 10.1128/genomeA.01182-15.

38.

Genomic Epidemiology of USA300 Methicillin-Resistant Staphylococcus aureus in an Urban Community.

Popovich KJ, Snitkin E, Green SJ, Aroutcheva A, Hayden MK, Hota B, Weinstein RA.

Clin Infect Dis. 2016 Jan 1;62(1):37-44. doi: 10.1093/cid/civ794. Epub 2015 Sep 7.

39.

Scientific Evidence Supports a Ban on Microbeads.

Rochman CM, Kross SM, Armstrong JB, Bogan MT, Darling ES, Green SJ, Smyth AR, Veríssimo D.

Environ Sci Technol. 2015 Sep 15;49(18):10759-61. doi: 10.1021/acs.est.5b03909. Epub 2015 Sep 3. No abstract available. Erratum in: Environ Sci Technol. 2015 Dec 15;49(24):14740.

PMID:
26334581
40.

Significant differences in fecal microbiota are associated with various stages of glucose tolerance in African American male veterans.

Ciubotaru I, Green SJ, Kukreja S, Barengolts E.

Transl Res. 2015 Nov;166(5):401-11. doi: 10.1016/j.trsl.2015.06.015. Epub 2015 Jul 8.

41.

Colonic bacterial composition in Parkinson's disease.

Keshavarzian A, Green SJ, Engen PA, Voigt RM, Naqib A, Forsyth CB, Mutlu E, Shannon KM.

Mov Disord. 2015 Sep;30(10):1351-60. doi: 10.1002/mds.26307. Epub 2015 Jul 16.

PMID:
26179554
42.

Deep Characterization of the Microbiomes of Calophya spp. (Hemiptera: Calophyidae) Gall-Inducing Psyllids Reveals the Absence of Plant Pathogenic Bacteria and Three Dominant Endosymbionts.

Overholt WA, Diaz R, Rosskopf E, Green SJ, Overholt WA.

PLoS One. 2015 Jul 10;10(7):e0132248. doi: 10.1371/journal.pone.0132248. eCollection 2015.

43.

Burn Injury Alters the Intestinal Microbiome and Increases Gut Permeability and Bacterial Translocation.

Earley ZM, Akhtar S, Green SJ, Naqib A, Khan O, Cannon AR, Hammer AM, Morris NL, Li X, Eberhardt JM, Gamelli RL, Kennedy RH, Choudhry MA.

PLoS One. 2015 Jul 8;10(7):e0129996. doi: 10.1371/journal.pone.0129996. eCollection 2015.

44.

Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches.

Green SJ, Venkatramanan R, Naqib A.

PLoS One. 2015 May 21;10(5):e0128122. doi: 10.1371/journal.pone.0128122. eCollection 2015.

45.

Metagenomic evaluation of bacterial and archaeal diversity in the geothermal hot springs of manikaran, India.

Bhatia S, Batra N, Pathak A, Green SJ, Joshi A, Chauhan A.

Genome Announc. 2015 Feb 19;3(1). pii: e01544-14. doi: 10.1128/genomeA.01544-14.

46.

APOE-modulated Aβ-induced neuroinflammation in Alzheimer's disease: current landscape, novel data, and future perspective.

Tai LM, Ghura S, Koster KP, Liakaite V, Maienschein-Cline M, Kanabar P, Collins N, Ben-Aissa M, Lei AZ, Bahroos N, Green SJ, Hendrickson B, Van Eldik LJ, LaDu MJ.

J Neurochem. 2015 May;133(4):465-88. doi: 10.1111/jnc.13072. Epub 2015 Mar 18. Review.

47.

Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.

Chauhan A, Pathak A, Rodolfo-Metalpa R, Milazzo M, Green SJ, Hall-Spencer JM.

Genome Announc. 2015 Feb 12;3(1). pii: e01543-14. doi: 10.1128/genomeA.01543-14.

48.

In situ tagging technique for fishes provides insight into growth and movement of invasive lionfish.

Akins JL, Morris JA, Green SJ.

Ecol Evol. 2014 Oct;4(19):3768-77. doi: 10.1002/ece3.1171. Epub 2014 Sep 10.

49.

Nitrite/nitrate detection in serum based on dual-plate generator-collector currents in a microtrench.

Gross AJ, Holmes S, Dale SE, Smallwood MJ, Green SJ, Winlove CP, Benjamin N, Winyard PG, Marken F.

Talanta. 2015 Jan;131:228-35. doi: 10.1016/j.talanta.2014.07.084. Epub 2014 Aug 5.

PMID:
25281097
50.

Niche and host-associated functional signatures of the root surface microbiome.

Ofek-Lalzar M, Sela N, Goldman-Voronov M, Green SJ, Hadar Y, Minz D.

Nat Commun. 2014 Sep 18;5:4950. doi: 10.1038/ncomms5950.

PMID:
25232638

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