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Spectral analysis of centre of pressure identifies altered balance control in individuals with moderate-severe traumatic brain injury.

Habib Perez O, Green RE, Mochizuki G.

Disabil Rehabil. 2018 Oct 16:1-9. doi: 10.1080/09638288.2018.1501101. [Epub ahead of print]


Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA.

Volden R, Palmer T, Byrne A, Cole C, Schmitz RJ, Green RE, Vollmers C.

Proc Natl Acad Sci U S A. 2018 Sep 25;115(39):9726-9731. doi: 10.1073/pnas.1806447115. Epub 2018 Sep 10.


The Risk of Subsequent Atrial Fibrillation in Patients With Atrial Flutter: The Role of Conduction Abnormalities Reflected on the Surface Electrocardiogram.

Green RE, Haseeb S, Baranchuk A.

Can J Cardiol. 2018 Sep;34(9):1234.e3. doi: 10.1016/j.cjca.2018.06.001. Epub 2018 Jun 5. No abstract available.


Evolutionary history and adaptation of a human pygmy population of Flores Island, Indonesia.

Tucci S, Vohr SH, McCoy RC, Vernot B, Robinson MR, Barbieri C, Nelson BJ, Fu W, Purnomo GA, Sudoyo H, Eichler EE, Barbujani G, Visscher PM, Akey JM, Green RE.

Science. 2018 Aug 3;361(6401):511-516. doi: 10.1126/science.aar8486.


Carbon Storage and Land-Use Strategies in Agricultural Landscapes across Three Continents.

Williams DR, Phalan B, Feniuk C, Green RE, Balmford A.

Curr Biol. 2018 Aug 6;28(15):2500-2505.e4. doi: 10.1016/j.cub.2018.05.087. Epub 2018 Jul 26.


Epigenetic maintenance of topological domains in the highly rearranged gibbon genome.

Lazar NH, Nevonen KA, O'Connell B, McCann C, O'Neill RJ, Green RE, Meyer TJ, Okhovat M, Carbone L.

Genome Res. 2018 Jul;28(7):983-997. doi: 10.1101/gr.233874.117. Epub 2018 Jun 18.


Characterization of Balance Control After Moderate to Severe Traumatic Brain Injury: A Longitudinal Recovery Study.

Perez OH, Green RE, Mochizuki G.

Phys Ther. 2018 Sep 1;98(9):786-795. doi: 10.1093/ptj/pzy065.


Minimizing polymerase biases in metabarcoding.

Nichols RV, Vollmers C, Newsom LA, Wang Y, Heintzman PD, Leighton M, Green RE, Shapiro B.

Mol Ecol Resour. 2018 May 24. doi: 10.1111/1755-0998.12895. [Epub ahead of print]


Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves.

Schweizer RM, Durvasula A, Smith J, Vohr SH, Stahler DR, Galaverni M, Thalmann O, Smith DW, Randi E, Ostrander EA, Green RE, Lohmueller KE, Novembre J, Wayne RK.

Mol Biol Evol. 2018 May 1;35(5):1190-1209. doi: 10.1093/molbev/msy031.


Longitudinal Recovery of Executive Control Functions After Moderate-Severe Traumatic Brain Injury: Examining Trajectories of Variability and Ex-Gaussian Parameters.

Vasquez BP, Tomaszczyk JC, Sharma B, Colella B, Green REA.

Neurorehabil Neural Repair. 2018 Mar;32(3):191-199. doi: 10.1177/1545968318760727. Epub 2018 Mar 21.


Systematic Review of Measurement Property Evidence for 8 Financial Management Instruments in Populations With Acquired Cognitive Impairment.

Engel L, Chui A, Beaton DE, Green RE, Dawson DR.

Arch Phys Med Rehabil. 2018 Sep;99(9):1848-1875. doi: 10.1016/j.apmr.2018.02.004. Epub 2018 Mar 7. Review.


Genomic Evidence of Widespread Admixture from Polar Bears into Brown Bears during the Last Ice Age.

Cahill JA, Heintzman PD, Harris K, Teasdale MD, Kapp J, Soares AER, Stirling I, Bradley D, Edwards CJ, Graim K, Kisleika AA, Malev AV, Monaghan N, Green RE, Shapiro B.

Mol Biol Evol. 2018 May 1;35(5):1120-1129. doi: 10.1093/molbev/msy018.


Oxidative Stress Biomarkers of Brain Damage: Hyperacute Plasma F2-Isoprostane Predicts Infarct Growth in Stroke.

Lorenzano S, Rost NS, Khan M, Li H, Lima FO, Maas MB, Green RE, Thankachan TK, Dipietro AJ, Arai K, Som AT, Pham LD, Wu O, Harris GJ, Lo EH, Blumberg JB, Milbury PE, Feske SK, Furie KL.

Stroke. 2018 Mar;49(3):630-637. doi: 10.1161/STROKEAHA.117.018440. Epub 2018 Jan 25.


Ancient DNA Resolves the History of Tetragnatha (Araneae, Tetragnathidae) Spiders on Rapa Nui.

Cotoras DD, Murray GGR, Kapp J, Gillespie RG, Griswold C, Simison WB, Green RE, Shapiro B.

Genes (Basel). 2017 Dec 20;8(12). pii: E403. doi: 10.3390/genes8120403.


Motor Function in Former Professional Football Players with History of Multiple Concussions.

Tarazi A, Tator CH, Wennberg R, Ebraheem A, Green REA, Collela B, Saverino C, Khodadadi M, Misquitta K, Tartaglia MC.

J Neurotrauma. 2018 Apr 15;35(8):1003-1007. doi: 10.1089/neu.2017.5290. Epub 2018 Mar 1.


Higher Anxiety Symptoms Predict Progressive Hippocampal Atrophy in the Chronic Stages of Moderate to Severe Traumatic Brain Injury.

Terpstra AR, Girard TA, Colella B, Green REA.

Neurorehabil Neural Repair. 2017 Dec;31(12):1063-1071. doi: 10.1177/1545968317736817. Epub 2017 Nov 19.


Natural selection shaped the rise and fall of passenger pigeon genomic diversity.

Murray GGR, Soares AER, Novak BJ, Schaefer NK, Cahill JA, Baker AJ, Demboski JR, Doll A, Da Fonseca RR, Fulton TL, Gilbert MTP, Heintzman PD, Letts B, McIntosh G, O'Connell BL, Peck M, Pipes ML, Rice ES, Santos KM, Sohrweide AG, Vohr SH, Corbett-Detig RB, Green RE, Shapiro B.

Science. 2017 Nov 17;358(6365):951-954. doi: 10.1126/science.aao0960.


A 3-way hybrid approach to generate a new high-quality chimpanzee reference genome (Pan_tro_3.0).

Kuderna LFK, Tomlinson C, Hillier LW, Tran A, Fiddes IT, Armstrong J, Laayouni H, Gordon D, Huddleston J, Garcia Perez R, Povolotskaya I, Serres Armero A, Gómez Garrido J, Ho D, Ribeca P, Alioto T, Green RE, Paten B, Navarro A, Betranpetit J, Herrero J, Eichler EE, Sharp AJ, Feuk L, Warren WC, Marques-Bonet T.

Gigascience. 2017 Nov 1;6(11):1-6. doi: 10.1093/gigascience/gix098.


The use of toxicokinetics and exposure studies to show that carprofen in cattle tissue could lead to secondary toxicity and death in wild vultures.

Naidoo V, Taggart MA, Duncan N, Wolter K, Chipangura J, Green RE, Galligan TH.

Chemosphere. 2018 Jan;190:80-89. doi: 10.1016/j.chemosphere.2017.08.167. Epub 2017 Sep 14.


Stable C and N isotope analysis of hair suggest undernourishment as a factor in the death of a mummified girl from late 19th century San Francisco, CA.

Eerkens JW, Hull B, Goodman J, Evoy A, Kapp JD, Hussain S, Green RE.

PLoS One. 2017 Sep 18;12(9):e0184921. doi: 10.1371/journal.pone.0184921. eCollection 2017.


Bird and bat species' global vulnerability to collision mortality at wind farms revealed through a trait-based assessment.

Thaxter CB, Buchanan GM, Carr J, Butchart SHM, Newbold T, Green RE, Tobias JA, Foden WB, O'Brien S, Pearce-Higgins JW.

Proc Biol Sci. 2017 Sep 13;284(1862). pii: 20170829. doi: 10.1098/rspb.2017.0829. Review.


A phylogenetic approach for haplotype analysis of sequence data from complex mitochondrial mixtures.

Vohr SH, Gordon R, Eizenga JM, Erlich HA, Calloway CD, Green RE.

Forensic Sci Int Genet. 2017 Sep;30:93-105. doi: 10.1016/j.fsigen.2017.05.007. Epub 2017 May 29.


Economic assessment of wild bird mortality induced by the use of lead gunshot in European wetlands.

Andreotti A, Guberti V, Nardelli R, Pirrello S, Serra L, Volponi S, Green RE.

Sci Total Environ. 2018 Jan 1;610-611:1505-1513. doi: 10.1016/j.scitotenv.2017.06.085. Epub 2017 Jun 23.


Land-use strategies to balance livestock production, biodiversity conservation and carbon storage in Yucatán, Mexico.

Williams DR, Alvarado F, Green RE, Manica A, Phalan B, Balmford A.

Glob Chang Biol. 2017 Dec;23(12):5260-5272. doi: 10.1111/gcb.13791. Epub 2017 Jul 10.


AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data.

Schaefer NK, Shapiro B, Green RE.

BMC Bioinformatics. 2017 Apr 4;18(1):203. doi: 10.1186/s12859-017-1613-0.


Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling.

Rice ES, Kohno S, John JS, Pham S, Howard J, Lareau LF, O'Connell BL, Hickey G, Armstrong J, Deran A, Fiddes I, Platt RN 2nd, Gresham C, McCarthy F, Kern C, Haan D, Phan T, Schmidt C, Sanford JR, Ray DA, Paten B, Guillette LJ Jr, Green RE.

Genome Res. 2017 May;27(5):686-696. doi: 10.1101/gr.213595.116. Epub 2017 Jan 30.


Erratum to "Impact of uncertainty in soil, climatic, and chemical information in a pesticide leaching assessment".

Loague K, Green RE, Giambelluca TW, Liang TC, Yost RS.

J Contam Hydrol. 2016 Nov;194:59-72. doi: 10.1016/j.jconhyd.2016.04.003. Epub 2016 Aug 8.


Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley.

Mascher M, Schuenemann VJ, Davidovich U, Marom N, Himmelbach A, Hübner S, Korol A, David M, Reiter E, Riehl S, Schreiber M, Vohr SH, Green RE, Dawson IK, Russell J, Kilian B, Muehlbauer GJ, Waugh R, Fahima T, Krause J, Weiss E, Stein N.

Nat Genet. 2016 Sep;48(9):1089-93. doi: 10.1038/ng.3611. Epub 2016 Jul 18.


Feasibility of online self-administered cognitive training in moderate-severe brain injury.

Sharma B, Tomaszczyk JC, Dawson D, Turner GR, Colella B, Green REA.

Disabil Rehabil. 2017 Jul;39(14):1380-1390. doi: 10.1080/09638288.2016.1195453. Epub 2016 Jul 14.


Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data.

Cahill JA, Soares AE, Green RE, Shapiro B.

Philos Trans R Soc Lond B Biol Sci. 2016 Jul 19;371(1699). pii: 20150138. doi: 10.1098/rstb.2015.0138.


Consistent response of bird populations to climate change on two continents.

Stephens PA, Mason LR, Green RE, Gregory RD, Sauer JR, Alison J, Aunins A, Brotons L, Butchart SH, Campedelli T, Chodkiewicz T, Chylarecki P, Crowe O, Elts J, Escandell V, Foppen RP, Heldbjerg H, Herrando S, Husby M, Jiguet F, Lehikoinen A, Lindström Å, Noble DG, Paquet JY, Reif J, Sattler T, Szép T, Teufelbauer N, Trautmann S, van Strien AJ, van Turnhout CA, Vorisek P, Willis SG.

Science. 2016 Apr 1;352(6281):84-7. doi: 10.1126/science.aac4858.


The complete mitochondrial genome of the black surfperch, Embiotoca jacksoni: Selection and substitution rates among surfperches (Embiotocidae).

Longo GC, O'Connell B, Green RE, Bernardi G.

Mar Genomics. 2016 Aug;28:107-112. doi: 10.1016/j.margen.2016.03.006. Epub 2016 Mar 16.


Reducing the land use of EU pork production: where there's swill, there's a way.

Zu Ermgassen EK, Phalan B, Green RE, Balmford A.

Food Policy. 2016 Jan;58:35-48.


Chromosome-scale shotgun assembly using an in vitro method for long-range linkage.

Putnam NH, O'Connell BL, Stites JC, Rice BJ, Blanchette M, Calef R, Troll CJ, Fields A, Hartley PD, Sugnet CW, Haussler D, Rokhsar DS, Green RE.

Genome Res. 2016 Mar;26(3):342-50. doi: 10.1101/gr.193474.115. Epub 2016 Feb 4.


Detecting hybridization using ancient DNA.

Schaefer NK, Shapiro B, Green RE.

Mol Ecol. 2016 Jun;25(11):2398-412. doi: 10.1111/mec.13556. Epub 2016 Mar 23. Review.


CONSERVATION ECOLOGY. How can higher-yield farming help to spare nature?

Phalan B, Green RE, Dicks LV, Dotta G, Feniuk C, Lamb A, Strassburg BB, Williams DR, zu Ermgassen EK, Balmford A.

Science. 2016 Jan 29;351(6272):450-1. doi: 10.1126/science.aad0055. No abstract available.


Editorial: Brain Injury as a Neurodegenerative Disorder.

Green RE.

Front Hum Neurosci. 2016 Jan 5;9:615. doi: 10.3389/fnhum.2015.00615. eCollection 2015. No abstract available.


Envisioning future cognitive telerehabilitation technologies: a co-design process with clinicians.

How TV, Hwang AS, Green REA, Mihailidis A.

Disabil Rehabil Assist Technol. 2017 Apr;12(3):244-261. doi: 10.3109/17483107.2015.1129457. Epub 2016 Jan 8.


A method for positive forensic identification of samples from extremely low-coverage sequence data.

Vohr SH, Buen Abad Najar CF, Shapiro B, Green RE.

BMC Genomics. 2015 Dec 7;16:1034. doi: 10.1186/s12864-015-2241-6.


Identifying instruments to quantify financial management skills in adults with acquired cognitive impairments.

Engel L, Bar Y, Beaton DE, Green RE, Dawson DR.

J Clin Exp Neuropsychol. 2016;38(1):76-95. doi: 10.1080/13803395.2015.1087468. Epub 2015 Nov 23. Review.


Targeted capture and resequencing of 1040 genes reveal environmentally driven functional variation in grey wolves.

Schweizer RM, Robinson J, Harrigan R, Silva P, Galverni M, Musiani M, Green RE, Novembre J, Wayne RK.

Mol Ecol. 2016 Jan;25(1):357-79. doi: 10.1111/mec.13467. Epub 2015 Dec 24.


Geographical variation in species' population responses to changes in temperature and precipitation.

Pearce-Higgins JW, Ockendon N, Baker DJ, Carr J, White EC, Almond RE, Amano T, Bertram E, Bradbury RB, Bradley C, Butchart SH, Doswald N, Foden W, Gill DJ, Green RE, Sutherland WJ, Tanner EV.

Proc Biol Sci. 2015 Nov 7;282(1818):20151561. doi: 10.1098/rspb.2015.1561.


Traumatic Brain Injury in Spinal Cord Injury: Frequency and Risk Factors.

Budisin B, Bradbury CC, Sharma B, Hitzig SL, Mikulis D, Craven C, McGilivray C, Corbie J, Green RE.

J Head Trauma Rehabil. 2016 Jul-Aug;31(4):E33-42. doi: 10.1097/HTR.0000000000000153.


Genome-Directed Lead Discovery: Biosynthesis, Structure Elucidation, and Biological Evaluation of Two Families of Polyene Macrolactams against Trypanosoma brucei.

Schulze CJ, Donia MS, Siqueira-Neto JL, Ray D, Raskatov JA, Green RE, McKerrow JH, Fischbach MA, Linington RG.

ACS Chem Biol. 2015 Oct 16;10(10):2373-81. doi: 10.1021/acschembio.5b00308. Epub 2015 Aug 13.


Development. Aneuploidy and mother's genes.

Vohr SH, Green RE.

Science. 2015 Apr 10;348(6231):180-1. doi: 10.1126/science.aab0877. No abstract available.


Frontotemporal correlates of impulsivity and machine learning in retired professional athletes with a history of multiple concussions.

Goswami R, Dufort P, Tartaglia MC, Green RE, Crawley A, Tator CH, Wennberg R, Mikulis DJ, Keightley M, Davis KD.

Brain Struct Funct. 2016 May;221(4):1911-25. doi: 10.1007/s00429-015-1012-0. Epub 2015 Feb 27.


Improving the translation from science to environmental policy decisions.

Margalida A, Kuiken T, Green RE.

Environ Sci Technol. 2015 Mar 3;49(5):2600. doi: 10.1021/acs.est.5b00145. Epub 2015 Feb 11. No abstract available.


Novel approaches to genetic analysis of fertility traits in New Zealand dairy cattle.

Bowley FE, Green RE, Amer PR, Meier S.

J Dairy Sci. 2015 Mar;98(3):2005-12. doi: 10.3168/jds.2014-8266. Epub 2015 Jan 15.


Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.

Green RE, Braun EL, Armstrong J, Earl D, Nguyen N, Hickey G, Vandewege MW, St John JA, Capella-Gutiérrez S, Castoe TA, Kern C, Fujita MK, Opazo JC, Jurka J, Kojima KK, Caballero J, Hubley RM, Smit AF, Platt RN, Lavoie CA, Ramakodi MP, Finger JW Jr, Suh A, Isberg SR, Miles L, Chong AY, Jaratlerdsiri W, Gongora J, Moran C, Iriarte A, McCormack J, Burgess SC, Edwards SV, Lyons E, Williams C, Breen M, Howard JT, Gresham CR, Peterson DG, Schmitz J, Pollock DD, Haussler D, Triplett EW, Zhang G, Irie N, Jarvis ED, Brochu CA, Schmidt CJ, McCarthy FM, Faircloth BC, Hoffmann FG, Glenn TC, Gabaldón T, Paten B, Ray DA.

Science. 2014 Dec 12;346(6215):1254449. doi: 10.1126/science.1254449. Epub 2014 Dec 11.


Whole-genome analyses resolve early branches in the tree of life of modern birds.

Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, Li C, Ho SY, Faircloth BC, Nabholz B, Howard JT, Suh A, Weber CC, da Fonseca RR, Li J, Zhang F, Li H, Zhou L, Narula N, Liu L, Ganapathy G, Boussau B, Bayzid MS, Zavidovych V, Subramanian S, Gabaldón T, Capella-Gutiérrez S, Huerta-Cepas J, Rekepalli B, Munch K, Schierup M, Lindow B, Warren WC, Ray D, Green RE, Bruford MW, Zhan X, Dixon A, Li S, Li N, Huang Y, Derryberry EP, Bertelsen MF, Sheldon FH, Brumfield RT, Mello CV, Lovell PV, Wirthlin M, Schneider MP, Prosdocimi F, Samaniego JA, Vargas Velazquez AM, Alfaro-Núñez A, Campos PF, Petersen B, Sicheritz-Ponten T, Pas A, Bailey T, Scofield P, Bunce M, Lambert DM, Zhou Q, Perelman P, Driskell AC, Shapiro B, Xiong Z, Zeng Y, Liu S, Li Z, Liu B, Wu K, Xiao J, Yinqi X, Zheng Q, Zhang Y, Yang H, Wang J, Smeds L, Rheindt FE, Braun M, Fjeldsa J, Orlando L, Barker FK, Jønsson KA, Johnson W, Koepfli KP, O'Brien S, Haussler D, Ryder OA, Rahbek C, Willerslev E, Graves GR, Glenn TC, McCormack J, Burt D, Ellegren H, Alström P, Edwards SV, Stamatakis A, Mindell DP, Cracraft J, Braun EL, Warnow T, Jun W, Gilbert MT, Zhang G.

Science. 2014 Dec 12;346(6215):1320-31. doi: 10.1126/science.1253451.

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