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Items: 1 to 50 of 773

1.

Mechanistic basis and efficacy of targeting β-catenin-TCF7L2-JMJD6-MYC axis to overcome resistance to BET inhibitors.

Saenz D, Fiskus W, Mill CP, Perera D, Manshouri T, Lara BH, Karkhanis V, Sharma S, Horrigan SK, Bose P, Kadia TM, Masarova L, DiNardo CD, Borthakur G, Khoury J, Takahashi K, Bhaskara S, Lin CY, Green MR, Coarfa C, Crews CM, Verstovsek S, Bhalla KN.

Blood. 2020 Feb 14. pii: blood.2019002922. doi: 10.1182/blood.2019002922. [Epub ahead of print]

PMID:
32068780
2.

Staining Nucleic Acids.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2020 Feb 3;2020(2):pdb.top098228. doi: 10.1101/pdb.top098228.

PMID:
32015006
3.

Selective Inhibition of HDAC3 Targets Synthetic Vulnerabilities and Activates Immune Surveillance in Lymphoma.

Mondello P, Tadros S, Teater M, Fontan L, Chang AY, Jain N, Yang H, Singh S, Ying HY, Chu CS, Ma MCJ, Toska E, Alig S, Durant M, de Stanchina E, Ghosh S, Mottok A, Nastoupil L, Neelapu SS, Weigert O, Inghirami G, Baselga J, Younes A, Yee C, Dogan A, Scheinberg DA, Roeder RG, Melnick AM, Green MR.

Cancer Discov. 2020 Jan 8. doi: 10.1158/2159-8290.CD-19-0116. [Epub ahead of print]

4.

In Vitro Transcription Systems.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2020 Jan 2;2020(1):pdb.top100750. doi: 10.1101/pdb.top100750.

PMID:
31896613
5.

Isolation of Total RNA from Zebrafish Embryos and Adults.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2020 Jan 2;2020(1):pdb.prot101667. doi: 10.1101/pdb.prot101667.

PMID:
31896612
6.

Purification of Total RNA from Mammalian Cells and Tissues.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2020 Jan 2;2020(1):pdb.prot101659. doi: 10.1101/pdb.prot101659.

PMID:
31896611
7.

Synthesis of Single-Stranded RNA Probes by In Vitro Transcription.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2020 Jan 2;2020(1):pdb.prot100628. doi: 10.1101/pdb.prot100628.

PMID:
31896610
8.

Screening Bacterial Colonies Using X-Gal and IPTG: α-Complementation.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Dec 2;2019(12):pdb.prot101329. doi: 10.1101/pdb.prot101329.

PMID:
31792144
9.

Easy Transformation of Escherichia coli: Nanoparticle-Mediated Transformation.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Dec 2;2019(12):pdb.prot101204. doi: 10.1101/pdb.prot101204.

PMID:
31792143
10.

Epigenetic Programing of B-Cell Lymphoma by BCL6 and Its Genetic Deregulation.

Yang H, Green MR.

Front Cell Dev Biol. 2019 Nov 7;7:272. doi: 10.3389/fcell.2019.00272. eCollection 2019. Review.

11.

Estimation of Cell Number by Hemocytometry Counting.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Nov 1;2019(11):pdb.prot097980. doi: 10.1101/pdb.prot097980.

PMID:
31676576
12.

Isolation of Poly(A)+ Messenger RNA Using Magnetic Oligo(dT) Beads.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Oct 1;2019(10):pdb.prot101733. doi: 10.1101/pdb.prot101733.

PMID:
31575797
13.

Removing DNA Contamination from RNA Samples by Treatment with RNase-Free DNase I.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Oct 1;2019(10):pdb.prot101725. doi: 10.1101/pdb.prot101725.

PMID:
31575796
14.

A KLF4-DYRK2-mediated pathway regulating self-renewal in CML stem cells.

Park CS, Lewis AH, Chen TJ, Bridges CS, Shen Y, Suppipat K, Puppi M, Tomolonis JA, Pang PD, Mistretta TA, Ma L, Green MR, Rau R, Lacorazza HD.

Blood. 2019 Nov 28;134(22):1960-1972. doi: 10.1182/blood.2018875922.

15.

Recovery of DNA from Agarose Gels Using Glass Beads.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Sep 3;2019(9):pdb.prot100453. doi: 10.1101/pdb.prot100453.

PMID:
31481493
16.

Ligation and Ligases.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Aug 1;2019(8):pdb.top101352. doi: 10.1101/pdb.top101352.

PMID:
31371476
17.

Attaching Phosphorylated Adaptors/Linkers to Blunt-Ended DNAs.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Aug 1;2019(8):pdb.prot101261. doi: 10.1101/pdb.prot101261.

PMID:
31371475
18.

Synthesis of cDNA Probes from mRNA Using Random Oligonucleotide Primers.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Jul 1;2019(7):pdb.prot100636. doi: 10.1101/pdb.prot100636.

PMID:
31262964
19.

Noncovalent inhibitors reveal BTK gatekeeper and auto-inhibitory residues that control its transforming activity.

Wang S, Mondal S, Zhao C, Berishaj M, Ghanakota P, Batlevi CL, Dogan A, Seshan VE, Abel R, Green MR, Younes A, Wendel HG.

JCI Insight. 2019 Jun 20;4(12). pii: 127566. doi: 10.1172/jci.insight.127566. eCollection 2019 Jun 20.

20.

Targetable genetic alterations of TCF4 (E2-2) drive immunoglobulin expression in diffuse large B cell lymphoma.

Jain N, Hartert K, Tadros S, Fiskus W, Havranek O, Ma MCJ, Bouska A, Heavican T, Kumar D, Deng Q, Moore D, Pak C, Liu CL, Gentles AJ, Hartmann E, Kridel R, Smedby KE, Juliusson G, Rosenquist R, Gascoyne RD, Rosenwald A, Giancotti F, Neelapu SS, Westin J, Vose JM, Lunning MA, Greiner T, Rodig S, Iqbal J, Alizadeh AA, Davis RE, Bhalla K, Green MR.

Sci Transl Med. 2019 Jun 19;11(497). pii: eaav5599. doi: 10.1126/scitranslmed.aav5599.

21.

Non-oncogene Addiction to SIRT3 Plays a Critical Role in Lymphomagenesis.

Li M, Chiang YL, Lyssiotis CA, Teater MR, Hong JY, Shen H, Wang L, Hu J, Jing H, Chen Z, Jain N, Duy C, Mistry SJ, Cerchietti L, Cross JR, Cantley LC, Green MR, Lin H, Melnick AM.

Cancer Cell. 2019 Jun 10;35(6):916-931.e9. doi: 10.1016/j.ccell.2019.05.002.

PMID:
31185214
22.

Author Correction: A large-scale RNA interference screen identifies genes that regulate autophagy at different stages.

Guo S, Pridham KJ, Virbasius CM, He B, Zhang L, Varmark H, Green MR, Sheng Z.

Sci Rep. 2019 Jun 10;9(1):8382. doi: 10.1038/s41598-019-42889-1.

23.

Polymerase Chain Reaction.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Jun 3;2019(6):pdb.top095109. doi: 10.1101/pdb.top095109.

PMID:
31160389
24.

Screening Colonies by Polymerase Chain Reaction (PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Jun 3;2019(6):pdb.prot095224. doi: 10.1101/pdb.prot095224.

PMID:
31160384
25.

Prosurvival kinase PIM2 is a therapeutic target for eradication of chronic myeloid leukemia stem cells.

Ma L, Pak ML, Ou J, Yu J, St Louis P, Shan Y, Hutchinson L, Li S, Brehm MA, Zhu LJ, Green MR.

Proc Natl Acad Sci U S A. 2019 May 21;116(21):10482-10487. doi: 10.1073/pnas.1903550116. Epub 2019 May 8.

26.

Rapid Amplification of Sequences from the 3' Ends of mRNAs: 3'-RACE.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 May 1;2019(5). doi: 10.1101/pdb.prot095216.

PMID:
31043557
27.

Rapid Amplification of Sequences from the 5' Ends of mRNAs: 5'-RACE.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 May 1;2019(5). doi: 10.1101/pdb.prot095208.

PMID:
31043556
28.

Amplification of cDNA Generated by Reverse Transcription of mRNA: Two-Step Reverse Transcription-Polymerase Chain Reaction (RT-PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 May 1;2019(5). doi: 10.1101/pdb.prot095190.

PMID:
31043555
29.

RUNX1-targeted therapy for AML expressing somatic or germline mutation in RUNX1.

Mill CP, Fiskus W, DiNardo CD, Qian Y, Raina K, Rajapakshe K, Perera D, Coarfa C, Kadia TM, Khoury JD, Saenz DT, Saenz DN, Illendula A, Takahashi K, Kornblau SM, Green MR, Futreal AP, Bushweller JH, Crews CM, Bhalla KN.

Blood. 2019 Jul 4;134(1):59-73. doi: 10.1182/blood.2018893982. Epub 2019 Apr 25.

PMID:
31023702
30.

Age-dependent regulation by androgens of gene expression in the anterior hypothalamus and stress-induced release of adrenal hormones in adolescent and adult male rats.

Green MR, Zeidan M, Hodges TE, McCormick CM.

J Neuroendocrinol. 2019 Jun;31(6):e12714. doi: 10.1111/jne.12714. Epub 2019 Apr 17.

PMID:
30912177
31.

Measurement of Radioactivity in Nucleic Acids.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Mar 1;2019(3). doi: 10.1101/pdb.prot100933.

PMID:
30824626
32.

Spun-Column Chromatography.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Mar 1;2019(3). doi: 10.1101/pdb.prot100594.

PMID:
30824625
33.

Random Priming: Labeling of Purified DNA Fragments by Extension of Random Oligonucleotides.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Mar 1;2019(3). doi: 10.1101/pdb.prot100586.

PMID:
30824624
34.

Long and Accurate Polymerase Chain Reaction (LA PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Mar 1;2019(3). doi: 10.1101/pdb.prot095158.

PMID:
30824616
35.

Loss of BOP1 confers resistance to BRAF kinase inhibitors in melanoma by activating MAP kinase pathway.

Gupta R, Bugide S, Wang B, Green MR, Johnson DB, Wajapeyee N.

Proc Natl Acad Sci U S A. 2019 Mar 5;116(10):4583-4591. doi: 10.1073/pnas.1821889116. Epub 2019 Feb 19.

36.

How to Win the Battle with RNase.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Feb 1;2019(2). doi: 10.1101/pdb.top101857.

PMID:
30710029
37.

Isolation of DNA Fragments from Polyacrylamide Gels by the Crush and Soak Method.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Feb 1;2019(2). doi: 10.1101/pdb.prot100479.

PMID:
30710028
38.

Nested Polymerase Chain Reaction (PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Feb 1;2019(2). doi: 10.1101/pdb.prot095182.

PMID:
30710024
39.

Inverse Polymerase Chain Reaction (PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Feb 1;2019(2). doi: 10.1101/pdb.prot095166.

PMID:
30710023
40.

Polymerase Chain Reaction (PCR) Amplification of GC-Rich Templates.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Feb 1;2019(2). doi: 10.1101/pdb.prot095141.

PMID:
30710022
41.

Analysis of DNA by Agarose Gel Electrophoresis.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Jan 2;2019(1). doi: 10.1101/pdb.top100388.

PMID:
30602561
42.

Agarose Gel Electrophoresis.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2019 Jan 2;2019(1). doi: 10.1101/pdb.prot100404.

PMID:
30602560
43.

Analysis and Normalization of Real-Time Polymerase Chain Reaction (PCR) Experimental Data.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2018 Oct 1;2018(10). doi: 10.1101/pdb.top095000.

PMID:
30275081
44.

Quantification of RNA by Real-Time Reverse Transcription-Polymerase Chain Reaction (RT-PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2018 Oct 1;2018(10). doi: 10.1101/pdb.prot095042.

PMID:
30275077
45.

Quantification of DNA by Real-Time Polymerase Chain Reaction (PCR).

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2018 Oct 1;2018(10). doi: 10.1101/pdb.prot095034.

PMID:
30275076
46.

Constructing a Standard Curve for Real-Time Polymerase Chain Reaction (PCR) Experiments.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2018 Oct 1;2018(10). doi: 10.1101/pdb.prot095026.

PMID:
30275075
47.

Optimizing Primer and Probe Concentrations for Use in Real-Time Polymerase Chain Reaction (PCR) Assays.

Green MR, Sambrook J.

Cold Spring Harb Protoc. 2018 Oct 1;2018(10). doi: 10.1101/pdb.prot095018.

PMID:
30275074
48.

TET2 Deficiency Causes Germinal Center Hyperplasia, Impairs Plasma Cell Differentiation, and Promotes B-cell Lymphomagenesis.

Dominguez PM, Ghamlouch H, Rosikiewicz W, Kumar P, Béguelin W, Fontán L, Rivas MA, Pawlikowska P, Armand M, Mouly E, Torres-Martin M, Doane AS, Calvo Fernandez MT, Durant M, Della-Valle V, Teater M, Cimmino L, Droin N, Tadros S, Motanagh S, Shih AH, Rubin MA, Tam W, Aifantis I, Levine RL, Elemento O, Inghirami G, Green MR, Figueroa ME, Bernard OA, Aoufouchi S, Li S, Shaknovich R, Melnick AM.

Cancer Discov. 2018 Dec;8(12):1632-1653. doi: 10.1158/2159-8290.CD-18-0657. Epub 2018 Oct 1.

49.

Effects of long-term dietary administration of estrogen receptor-beta agonist diarylpropionitrile on ovariectomized female ICR (CD-1) mice.

Said SA, Isedowo R, Guerin C, Nar NN, Lillie L, Bukovac S, Simone JJ, Green MR, McCormick CM, Stuart JA.

Geroscience. 2018 Aug;40(4):393-403. doi: 10.1007/s11357-018-0038-7. Epub 2018 Aug 11.

50.

Pharmacological reactivation of inactive X-linked Mecp2 in cerebral cortical neurons of living mice.

Przanowski P, Wasko U, Zheng Z, Yu J, Sherman R, Zhu LJ, McConnell MJ, Tushir-Singh J, Green MR, Bhatnagar S.

Proc Natl Acad Sci U S A. 2018 Jul 31;115(31):7991-7996. doi: 10.1073/pnas.1803792115. Epub 2018 Jul 16.

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