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Items: 13

1.

Perturbation of IIS/TOR signaling alters the landscape of sex-differential gene expression in Drosophila.

Graze RM, Tzeng RY, Howard TS, Arbeitman MN.

BMC Genomics. 2018 Dec 10;19(1):893. doi: 10.1186/s12864-018-5308-3.

2.

Direct Testing for Allele-Specific Expression Differences Between Conditions.

León-Novelo L, Gerken AR, Graze RM, McIntyre LM, Marroni F.

G3 (Bethesda). 2018 Feb 2;8(2):447-460. doi: 10.1534/g3.117.300139.

3.

Recombination rate plasticity: revealing mechanisms by design.

Stevison LS, Sefick S, Rushton C, Graze RM.

Philos Trans R Soc Lond B Biol Sci. 2017 Dec 19;372(1736). pii: 20160459. doi: 10.1098/rstb.2016.0459. Review.

4.

Sex Differences in Drosophila Somatic Gene Expression: Variation and Regulation by doublesex.

Arbeitman MN, New FN, Fear JM, Howard TS, Dalton JE, Graze RM.

G3 (Bethesda). 2016 Jul 7;6(7):1799-808. doi: 10.1534/g3.116.027961.

5.

A flexible Bayesian method for detecting allelic imbalance in RNA-seq data.

León-Novelo LG, McIntyre LM, Fear JM, Graze RM.

BMC Genomics. 2014 Oct 23;15:920. doi: 10.1186/1471-2164-15-920.

6.

What the X has to do with it: differences in regulatory variability between the sexes in Drosophila simulans.

Graze RM, McIntyre LM, Morse AM, Boyd BM, Nuzhdin SV, Wayne ML.

Genome Biol Evol. 2014 Apr;6(4):818-29. doi: 10.1093/gbe/evu060.

7.

Purification of transcripts and metabolites from Drosophila heads.

Jensen K, Sanchez-Garcia J, Williams C, Khare S, Mathur K, Graze RM, Hahn DA, McIntyre LM, Rincon-Limas DE, Fernandez-Funez P.

J Vis Exp. 2013 Mar 15;(73):e50245. doi: 10.3791/50245.

8.

Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles.

Yang Y, Graze RM, Walts BM, Lopez CM, Baker HV, Wayne ML, Nuzhdin SV, McIntyre LM.

G3 (Bethesda). 2011 Nov;1(6):427-36. doi: 10.1534/g3.111.000596. Epub 2011 Nov 1.

9.

Allelic imbalance in Drosophila hybrid heads: exons, isoforms, and evolution.

Graze RM, Novelo LL, Amin V, Fear JM, Casella G, Nuzhdin SV, McIntyre LM.

Mol Biol Evol. 2012 Jun;29(6):1521-32. doi: 10.1093/molbev/msr318. Epub 2012 Jan 7.

10.

Allele-specific expression assays using Solexa.

Main BJ, Bickel RD, McIntyre LM, Graze RM, Calabrese PP, Nuzhdin SV.

BMC Genomics. 2009 Sep 9;10:422. doi: 10.1186/1471-2164-10-422.

11.

Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression.

Graze RM, McIntyre LM, Main BJ, Wayne ML, Nuzhdin SV.

Genetics. 2009 Oct;183(2):547-61, 1SI-21SI. doi: 10.1534/genetics.109.105957. Epub 2009 Aug 10.

12.

New candidate genes for sex-comb divergence between Drosophila mauritiana and Drosophila simulans.

Graze RM, Barmina O, Tufts D, Naderi E, Harmon KL, Persianinova M, Nuzhdin SV.

Genetics. 2007 Aug;176(4):2561-76. Epub 2007 Jun 11.

13.

Quantitative trait loci responsible for variation in sexually dimorphic traits in Drosophila melanogaster.

Kopp A, Graze RM, Xu S, Carroll SB, Nuzhdin SV.

Genetics. 2003 Feb;163(2):771-87.

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