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Items: 1 to 50 of 230

1.

Evolutionary mitochondrial biology in titisee.

Gray MW, Mootha VK.

IUBMB Life. 2018 Dec;70(12):1184-1187. doi: 10.1002/iub.1958. Epub 2018 Oct 24. No abstract available.

PMID:
30358089
2.

Respiratory chain Complex I of unparalleled divergence in diplonemids.

Valach M, Léveillé-Kunst A, Gray MW, Burger G.

J Biol Chem. 2018 Oct 12;293(41):16043-16056. doi: 10.1074/jbc.RA118.005326. Epub 2018 Aug 30.

PMID:
30166340
3.

Lynn Margulis and the endosymbiont hypothesis: 50 years later.

Gray MW.

Mol Biol Cell. 2017 May 15;28(10):1285-1287. doi: 10.1091/mbc.E16-07-0509. Review.

4.

Gene Loss and Error-Prone RNA Editing in the Mitochondrion of Perkinsela, an Endosymbiotic Kinetoplastid.

David V, Flegontov P, Gerasimov E, Tanifuji G, Hashimi H, Logacheva MD, Maruyama S, Onodera NT, Gray MW, Archibald JM, Lukeš J.

MBio. 2015 Dec 1;6(6):e01498-15. doi: 10.1128/mBio.01498-15.

5.

Data showing the compositional complexity of the mitochondrial proteome of a unicellular eukaryote (Acanthamoeba castellanii, supergroup Amoebozoa).

Gawryluk RM, Chisholm KA, Pinto DM, Gray MW.

Data Brief. 2014 Aug 22;1:12-4. doi: 10.1016/j.dib.2014.08.005. eCollection 2014 Dec.

6.

Ocean Acidification Has Multiple Modes of Action on Bivalve Larvae.

Waldbusser GG, Hales B, Langdon CJ, Haley BA, Schrader P, Brunner EL, Gray MW, Miller CA, Gimenez I, Hutchinson G.

PLoS One. 2015 Jun 10;10(6):e0128376. doi: 10.1371/journal.pone.0128376. eCollection 2015.

7.

Mosaic nature of the mitochondrial proteome: Implications for the origin and evolution of mitochondria.

Gray MW.

Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10133-8. doi: 10.1073/pnas.1421379112. Epub 2015 Apr 6.

8.

Widespread occurrence of organelle genome-encoded 5S rRNAs including permuted molecules.

Valach M, Burger G, Gray MW, Lang BF.

Nucleic Acids Res. 2014 Dec 16;42(22):13764-77. doi: 10.1093/nar/gku1266. Epub 2014 Nov 27.

9.

Compositional complexity of the mitochondrial proteome of a unicellular eukaryote (Acanthamoeba castellanii, supergroup Amoebozoa) rivals that of animals, fungi, and plants.

Gawryluk RM, Chisholm KA, Pinto DM, Gray MW.

J Proteomics. 2014 Sep 23;109:400-16. doi: 10.1016/j.jprot.2014.07.005. Epub 2014 Jul 12.

PMID:
25026440
10.

Mitochondrial tRNA 5'-editing in Dictyostelium discoideum and Polysphondylium pallidum.

Abad MG, Long Y, Kinchen RD, Schindel ET, Gray MW, Jackman JE.

J Biol Chem. 2014 May 30;289(22):15155-65. doi: 10.1074/jbc.M114.561514. Epub 2014 Apr 15.

11.

The pre-endosymbiont hypothesis: a new perspective on the origin and evolution of mitochondria.

Gray MW.

Cold Spring Harb Perspect Biol. 2014 Mar 1;6(3). pii: a016097. doi: 10.1101/cshperspect.a016097. Review.

12.

Organelle evolution, fragmented rRNAs, and Carl.

Gray MW.

RNA Biol. 2014;11(3):213-6. doi: 10.4161/rna.27799. Epub 2014 Feb 6. Review.

13.

Evidence for a hydrogenosomal-type anaerobic ATP generation pathway in Acanthamoeba castellanii.

Leger MM, Gawryluk RM, Gray MW, Roger AJ.

PLoS One. 2013 Sep 27;8(9):e69532. doi: 10.1371/journal.pone.0069532. eCollection 2013.

14.

The ancient and widespread nature of the ER-mitochondria encounter structure.

Wideman JG, Gawryluk RM, Gray MW, Dacks JB.

Mol Biol Evol. 2013 Sep;30(9):2044-9. doi: 10.1093/molbev/mst120. Epub 2013 Jun 28. Erratum in: Mol Biol Evol. 2014 Jan;31(1):251.

PMID:
23813918
15.

Strikingly bacteria-like and gene-rich mitochondrial genomes throughout jakobid protists.

Burger G, Gray MW, Forget L, Lang BF.

Genome Biol Evol. 2013;5(2):418-38. doi: 10.1093/gbe/evt008.

16.

Subcomplexes of ancestral respiratory complex I subunits rapidly turn over in vivo as productive assembly intermediates in Arabidopsis.

Li L, Nelson CJ, Carrie C, Gawryluk RM, Solheim C, Gray MW, Whelan J, Millar AH.

J Biol Chem. 2013 Feb 22;288(8):5707-17. doi: 10.1074/jbc.M112.432070. Epub 2012 Dec 27.

17.

Absence of a universal element for tRNAHis identity in Acanthamoeba castellanii.

Rao BS, Mohammad F, Gray MW, Jackman JE.

Nucleic Acids Res. 2013 Feb 1;41(3):1885-94. doi: 10.1093/nar/gks1242. Epub 2012 Dec 14.

18.

Proteomics reveals plastid- and periplastid-targeted proteins in the chlorarachniophyte alga Bigelowiella natans.

Hopkins JF, Spencer DF, Laboissiere S, Neilson JA, Eveleigh RJ, Durnford DG, Gray MW, Archibald JM.

Genome Biol Evol. 2012;4(12):1391-406. doi: 10.1093/gbe/evs115.

19.

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs.

Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, Elias M, Eveleigh RJ, Herman EK, Klute MJ, Nakayama T, Oborník M, Reyes-Prieto A, Armbrust EV, Aves SJ, Beiko RG, Coutinho P, Dacks JB, Durnford DG, Fast NM, Green BR, Grisdale CJ, Hempel F, Henrissat B, Höppner MP, Ishida K, Kim E, Kořený L, Kroth PG, Liu Y, Malik SB, Maier UG, McRose D, Mock T, Neilson JA, Onodera NT, Poole AM, Pritham EJ, Richards TA, Rocap G, Roy SW, Sarai C, Schaack S, Shirato S, Slamovits CH, Spencer DF, Suzuki S, Worden AZ, Zauner S, Barry K, Bell C, Bharti AK, Crow JA, Grimwood J, Kramer R, Lindquist E, Lucas S, Salamov A, McFadden GI, Lane CE, Keeling PJ, Gray MW, Grigoriev IV, Archibald JM.

Nature. 2012 Dec 6;492(7427):59-65. doi: 10.1038/nature11681. Epub 2012 Nov 28.

PMID:
23201678
20.

Mitochondrial evolution.

Gray MW.

Cold Spring Harb Perspect Biol. 2012 Sep 1;4(9):a011403. doi: 10.1101/cshperspect.a011403. Review.

21.

Composition of the mitochondrial electron transport chain in acanthamoeba castellanii: structural and evolutionary insights.

Gawryluk RM, Chisholm KA, Pinto DM, Gray MW.

Biochim Biophys Acta. 2012 Nov;1817(11):2027-37. doi: 10.1016/j.bbabio.2012.06.005. Epub 2012 Jun 15.

22.

Evolutionary origin of RNA editing.

Gray MW.

Biochemistry. 2012 Jul 3;51(26):5235-42. Epub 2012 Jun 21. Review.

PMID:
22708551
23.

Doing it in reverse: 3'-to-5' polymerization by the Thg1 superfamily.

Jackman JE, Gott JM, Gray MW.

RNA. 2012 May;18(5):886-99. doi: 10.1261/rna.032300.112. Epub 2012 Mar 28. Review.

24.

The incredible shrinking organelle.

Gray MW.

EMBO Rep. 2011 Sep 1;12(9):873. doi: 10.1038/embor.2011.168. No abstract available.

25.
26.

How a neutral evolutionary ratchet can build cellular complexity.

Lukeš J, Archibald JM, Keeling PJ, Doolittle WF, Gray MW.

IUBMB Life. 2011 Jul;63(7):528-37. doi: 10.1002/iub.489. Review.

27.

Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa?

Flegontov P, Gray MW, Burger G, Lukeš J.

Curr Genet. 2011 Aug;57(4):225-32. doi: 10.1007/s00294-011-0340-8. Epub 2011 May 5. Review.

PMID:
21544620
28.

Comment on "Does constructive neutral evolution play an important role in the origin of cellular complexity?" DOI 10.1002/bies.201100010.

Doolittle WF, Lukeš J, Archibald JM, Keeling PJ, Gray MW.

Bioessays. 2011 Jun;33(6):427-9. doi: 10.1002/bies.201100039. Epub 2011 Apr 29. No abstract available.

PMID:
21538416
29.

A role for tRNA(His) guanylyltransferase (Thg1)-like proteins from Dictyostelium discoideum in mitochondrial 5'-tRNA editing.

Abad MG, Long Y, Willcox A, Gott JM, Gray MW, Jackman JE.

RNA. 2011 Apr;17(4):613-23. doi: 10.1261/rna.2517111. Epub 2011 Feb 9.

30.

Cell biology. Irremediable complexity?

Gray MW, Lukes J, Archibald JM, Keeling PJ, Doolittle WF.

Science. 2010 Nov 12;330(6006):920-1. doi: 10.1126/science.1198594. No abstract available.

PMID:
21071654
31.

Ribosomal RNA genes in Euglena gracilis mitochondrial DNA: fragmented genes in a seemingly fragmented genome.

Spencer DF, Gray MW.

Mol Genet Genomics. 2011 Jan;285(1):19-31. doi: 10.1007/s00438-010-0585-9. Epub 2010 Oct 27.

PMID:
20978909
32.

Rethinking plastid evolution.

Gray MW.

EMBO Rep. 2010 Aug;11(8):562-3. doi: 10.1038/embor.2010.107. No abstract available.

33.
34.

Abundant 5S rRNA-like transcripts encoded by the mitochondrial genome in amoebozoa.

Bullerwell CE, Burger G, Gott JM, Kourennaia O, Schnare MN, Gray MW.

Eukaryot Cell. 2010 May;9(5):762-73. doi: 10.1128/EC.00013-10. Epub 2010 Mar 19.

35.

Two forms of RNA editing are required for tRNA maturation in Physarum mitochondria.

Gott JM, Somerlot BH, Gray MW.

RNA. 2010 Mar;16(3):482-8. doi: 10.1261/rna.1958810. Epub 2010 Jan 27.

36.

The path to RNA editing in plant mitochondria: the Halifax chapter.

Gray MW.

IUBMB Life. 2009 Dec;61(12):1114-7. doi: 10.1002/iub.270. Review.

37.

RNA editing in plant mitochondria: 20 years later.

Gray MW.

IUBMB Life. 2009 Dec;61(12):1101-4. doi: 10.1002/iub.272. Review.

38.

U3 snoRNA genes are multi-copy and frequently linked to U5 snRNA genes in Euglena gracilis.

Charette JM, Gray MW.

BMC Genomics. 2009 Nov 16;10:528. doi: 10.1186/1471-2164-10-528.

39.

An ancient fission of mitochondrial Cox1.

Gawryluk RM, Gray MW.

Mol Biol Evol. 2010 Jan;27(1):7-10. doi: 10.1093/molbev/msp223.

PMID:
19767348
40.
41.
42.

A phylogenomic investigation into the origin of metazoa.

Ruiz-Trillo I, Roger AJ, Burger G, Gray MW, Lang BF.

Mol Biol Evol. 2008 Apr;25(4):664-72. doi: 10.1093/molbev/msn006. Epub 2008 Jan 9.

PMID:
18184723
43.

Exploring the mitochondrial proteome of the ciliate protozoon Tetrahymena thermophila: direct analysis by tandem mass spectrometry.

Smith DG, Gawryluk RM, Spencer DF, Pearlman RE, Siu KW, Gray MW.

J Mol Biol. 2007 Nov 30;374(3):837-63. Epub 2007 Sep 22.

PMID:
17959197
44.

Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria.

Jackson CJ, Norman JE, Schnare MN, Gray MW, Keeling PJ, Waller RF.

BMC Biol. 2007 Sep 27;5:41.

45.

Toward resolving the eukaryotic tree: the phylogenetic positions of jakobids and cercozoans.

Rodríguez-Ezpeleta N, Brinkmann H, Burger G, Roger AJ, Gray MW, Philippe H, Lang BF.

Curr Biol. 2007 Aug 21;17(16):1420-5. Epub 2007 Aug 9.

46.
47.

A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer.

Rogers MB, Watkins RF, Harper JT, Durnford DG, Gray MW, Keeling PJ.

BMC Evol Biol. 2007 Jun 11;7:89.

48.

The origins of multicellularity: a multi-taxon genome initiative.

Ruiz-Trillo I, Burger G, Holland PW, King N, Lang BF, Roger AJ, Gray MW.

Trends Genet. 2007 Mar;23(3):113-8. Epub 2007 Feb 1.

PMID:
17275133
49.

TBestDB: a taxonomically broad database of expressed sequence tags (ESTs).

O'Brien EA, Koski LB, Zhang Y, Yang L, Wang E, Gray MW, Burger G, Lang BF.

Nucleic Acids Res. 2007 Jan;35(Database issue):D445-51.

50.

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