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Items: 11

1.

Origin of exon skipping-rich transcriptomes in animals driven by evolution of gene architecture.

Grau-Bové X, Ruiz-Trillo I, Irimia M.

Genome Biol. 2018 Sep 17;19(1):135. doi: 10.1186/s13059-018-1499-9.

2.

Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides.

Leonard G, Labarre A, Milner DS, Monier A, Soanes D, Wideman JG, Maguire F, Stevens S, Sain D, Grau-Bové X, Sebé-Pedrós A, Stajich JE, Paszkiewicz K, Brown MW, Hall N, Wickstead B, Richards TA.

Open Biol. 2018 Jan;8(1). pii: 170184. doi: 10.1098/rsob.170184.

3.

Evaluation of single-cell genomics to address evolutionary questions using three SAGs of the choanoflagellate Monosiga brevicollis.

López-Escardó D, Grau-Bové X, Guillaumet-Adkins A, Gut M, Sieracki ME, Ruiz-Trillo I.

Sci Rep. 2017 Sep 8;7(1):11025. doi: 10.1038/s41598-017-11466-9.

4.

Codon adaptation to tRNAs with Inosine modification at position 34 is widespread among Eukaryotes and present in two Bacterial phyla.

Rafels-Ybern À, Torres AG, Grau-Bove X, Ruiz-Trillo I, Ribas de Pouplana L.

RNA Biol. 2018;15(4-5):500-507. doi: 10.1080/15476286.2017.1358348. Epub 2017 Sep 26.

5.

Dynamics of genomic innovation in the unicellular ancestry of animals.

Grau-Bové X, Torruella G, Donachie S, Suga H, Leonard G, Richards TA, Ruiz-Trillo I.

Elife. 2017 Jul 20;6. pii: e26036. doi: 10.7554/eLife.26036.

6.

Expression Atlas of the Deubiquitinating Enzymes in the Adult Mouse Retina, Their Evolutionary Diversification and Phenotypic Roles.

Esquerdo M, Grau-Bové X, Garanto A, Toulis V, Garcia-Monclús S, Millo E, López-Iniesta MJ, Abad-Morales V, Ruiz-Trillo I, Marfany G.

PLoS One. 2016 Mar 2;11(3):e0150364. doi: 10.1371/journal.pone.0150364. eCollection 2016.

7.

Phylogenomics Reveals Convergent Evolution of Lifestyles in Close Relatives of Animals and Fungi.

Torruella G, de Mendoza A, Grau-Bové X, Antó M, Chaplin MA, del Campo J, Eme L, Pérez-Cordón G, Whipps CM, Nichols KM, Paley R, Roger AJ, Sitjà-Bobadilla A, Donachie S, Ruiz-Trillo I.

Curr Biol. 2015 Sep 21;25(18):2404-10. doi: 10.1016/j.cub.2015.07.053. Epub 2015 Sep 10.

8.

Origin and evolution of lysyl oxidases.

Grau-Bové X, Ruiz-Trillo I, Rodriguez-Pascual F.

Sci Rep. 2015 May 29;5:10568. doi: 10.1038/srep10568.

9.

The eukaryotic ancestor had a complex ubiquitin signaling system of archaeal origin.

Grau-Bové X, Sebé-Pedrós A, Ruiz-Trillo I.

Mol Biol Evol. 2015 Mar;32(3):726-39. doi: 10.1093/molbev/msu334. Epub 2014 Dec 17.

10.

Evolution and classification of myosins, a paneukaryotic whole-genome approach.

Sebé-Pedrós A, Grau-Bové X, Richards TA, Ruiz-Trillo I.

Genome Biol Evol. 2014 Feb;6(2):290-305. doi: 10.1093/gbe/evu013.

11.

A genomic survey of HECT ubiquitin ligases in eukaryotes reveals independent expansions of the HECT system in several lineages.

Grau-Bové X, Sebé-Pedrós A, Ruiz-Trillo I.

Genome Biol Evol. 2013;5(5):833-47. doi: 10.1093/gbe/evt052.

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