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Items: 17

1.

Genome of the tropical plant Marchantia inflexa: implications for sex chromosome evolution and dehydration tolerance.

Marks RA, Smith JJ, Cronk Q, Grassa CJ, McLetchie DN.

Sci Rep. 2019 Jun 19;9(1):8722. doi: 10.1038/s41598-019-45039-9.

2.

Sunflower pan-genome analysis shows that hybridization altered gene content and disease resistance.

Hübner S, Bercovich N, Todesco M, Mandel JR, Odenheimer J, Ziegler E, Lee JS, Baute GJ, Owens GL, Grassa CJ, Ebert DP, Ostevik KL, Moyers BT, Yakimowski S, Masalia RR, Gao L, Ćalić I, Bowers JE, Kane NC, Swanevelder DZH, Kubach T, Muños S, Langlade NB, Burke JM, Rieseberg LH.

Nat Plants. 2019 Jan;5(1):54-62. doi: 10.1038/s41477-018-0329-0. Epub 2018 Dec 31.

PMID:
30598532
3.

An evaluation of alternative explanations for widespread cytonuclear discordance in annual sunflowers (Helianthus).

Lee-Yaw JA, Grassa CJ, Joly S, Andrew RL, Rieseberg LH.

New Phytol. 2019 Jan;221(1):515-526. doi: 10.1111/nph.15386. Epub 2018 Aug 23.

PMID:
30136727
4.

Organellar genomics: a useful tool to study evolutionary relationships and molecular evolution in Gracilariaceae (Rhodophyta).

Iha C, Grassa CJ, Lyra GM, Davis CC, Verbruggen H, Oliveira MC.

J Phycol. 2018 Dec;54(6):775-787. doi: 10.1111/jpy.12765. Epub 2018 Sep 12.

PMID:
29989670
5.

The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution.

Badouin H, Gouzy J, Grassa CJ, Murat F, Staton SE, Cottret L, Lelandais-Brière C, Owens GL, Carrère S, Mayjonade B, Legrand L, Gill N, Kane NC, Bowers JE, Hubner S, Bellec A, Bérard A, Bergès H, Blanchet N, Boniface MC, Brunel D, Catrice O, Chaidir N, Claudel C, Donnadieu C, Faraut T, Fievet G, Helmstetter N, King M, Knapp SJ, Lai Z, Le Paslier MC, Lippi Y, Lorenzon L, Mandel JR, Marage G, Marchand G, Marquand E, Bret-Mestries E, Morien E, Nambeesan S, Nguyen T, Pegot-Espagnet P, Pouilly N, Raftis F, Sallet E, Schiex T, Thomas J, Vandecasteele C, Varès D, Vear F, Vautrin S, Crespi M, Mangin B, Burke JM, Salse J, Muños S, Vincourt P, Rieseberg LH, Langlade NB.

Nature. 2017 Jun 1;546(7656):148-152. doi: 10.1038/nature22380. Epub 2017 May 22.

PMID:
28538728
6.

Complete Mitochondrial Genome Sequence of Sunflower (Helianthus annuus L.).

Grassa CJ, Ebert DP, Kane NC, Rieseberg LH.

Genome Announc. 2016 Sep 15;4(5). pii: e00981-16. doi: 10.1128/genomeA.00981-16.

7.

Genome scans reveal candidate domestication and improvement genes in cultivated sunflower, as well as post-domestication introgression with wild relatives.

Baute GJ, Kane NC, Grassa CJ, Lai Z, Rieseberg LH.

New Phytol. 2015 Apr;206(2):830-8. doi: 10.1111/nph.13255. Epub 2015 Jan 12.

8.

Complete Genome Sequence of Haemophilus influenzae Strain 375 from the Middle Ear of a Pediatric Patient with Otitis Media.

Mell JC, Sinha S, Balashov S, Viadas C, Grassa CJ, Ehrlich GD, Nislow C, Redfield RJ, Garmendia J.

Genome Announc. 2014 Dec 4;2(6). pii: e01245-14. doi: 10.1128/genomeA.01245-14.

9.

Landscape genomics of Populus trichocarpa: the role of hybridization, limited gene flow, and natural selection in shaping patterns of population structure.

Geraldes A, Farzaneh N, Grassa CJ, McKown AD, Guy RD, Mansfield SD, Douglas CJ, Cronk QC.

Evolution. 2014 Nov;68(11):3260-80. doi: 10.1111/evo.12497. Epub 2014 Sep 4.

PMID:
25065449
10.

Draft Genome Sequence of Exiguobacterium pavilionensis Strain RW-2, with Wide Thermal, Salinity, and pH Tolerance, Isolated from Modern Freshwater Microbialites.

White RA 3rd, Grassa CJ, Suttle CA.

Genome Announc. 2013 Aug 8;1(4). pii: e00597-13. doi: 10.1128/genomeA.00597-13.

11.

First draft genome sequence from a member of the genus agrococcus, isolated from modern microbialites.

White RA 3rd, Grassa CJ, Suttle CA.

Genome Announc. 2013 Jun 27;1(4). pii: e00391-13. doi: 10.1128/genomeA.00391-13.

12.

Genomic islands of divergence are not affected by geography of speciation in sunflowers.

Renaut S, Grassa CJ, Yeaman S, Moyers BT, Lai Z, Kane NC, Bowers JE, Burke JM, Rieseberg LH.

Nat Commun. 2013;4:1827. doi: 10.1038/ncomms2833.

PMID:
23652015
13.

A 34K SNP genotyping array for Populus trichocarpa: design, application to the study of natural populations and transferability to other Populus species.

Geraldes A, Difazio SP, Slavov GT, Ranjan P, Muchero W, Hannemann J, Gunter LE, Wymore AM, Grassa CJ, Farzaneh N, Porth I, McKown AD, Skyba O, Li E, Fujita M, Klápště J, Martin J, Schackwitz W, Pennacchio C, Rokhsar D, Friedmann MC, Wasteneys GO, Guy RD, El-Kassaby YA, Mansfield SD, Cronk QC, Ehlting J, Douglas CJ, Tuskan GA.

Mol Ecol Resour. 2013 Mar;13(2):306-23. doi: 10.1111/1755-0998.12056. Epub 2013 Jan 11.

PMID:
23311503
14.

Recent nonhybrid origin of sunflower ecotypes in a novel habitat.

Andrew RL, Kane NC, Baute GJ, Grassa CJ, Rieseberg LH.

Mol Ecol. 2013 Feb;22(3):799-813. doi: 10.1111/mec.12038. Epub 2012 Oct 16.

PMID:
23072494
15.

The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads.

Wang Z, Hobson N, Galindo L, Zhu S, Shi D, McDill J, Yang L, Hawkins S, Neutelings G, Datla R, Lambert G, Galbraith DW, Grassa CJ, Geraldes A, Cronk QC, Cullis C, Dash PK, Kumar PA, Cloutier S, Sharpe AG, Wong GK, Wang J, Deyholos MK.

Plant J. 2012 Nov;72(3):461-73. doi: 10.1111/j.1365-313X.2012.05093.x. Epub 2012 Aug 14.

16.

The Population Genomics of Sunflowers and Genomic Determinants of Protein Evolution Revealed by RNAseq.

Renaut S, Grassa CJ, Moyers BT, Kane NC, Rieseberg LH.

Biology (Basel). 2012 Oct 25;1(3):575-96. doi: 10.3390/biology1030575.

17.

Elevated Evolutionary Rates among Functionally Diverged Reproductive Genes across Deep Vertebrate Lineages.

Grassa CJ, Kulathinal RJ.

Int J Evol Biol. 2011;2011:274975. doi: 10.4061/2011/274975. Epub 2011 Jul 28.

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