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Items: 1 to 50 of 155

1.

Neck linker docking is critical for Kinesin-1 force generation in cells but at a cost to motor speed and processivity.

Budaitis BG, Jariwala S, Reinemann DN, Schimert KI, Scarabelli G, Grant BJ, Sept D, Lang MJ, Verhey KJ.

Elife. 2019 May 14;8. pii: e44146. doi: 10.7554/eLife.44146.

2.

Reply to Law and Walkey: Long-Term Outcomes after Prolonged Mechanical Ventilation: What of Those Cast Away?

Jubran A, Grant BJB, Tobin MJ.

Am J Respir Crit Care Med. 2019 Jun 15;199(12):1580-1581. doi: 10.1164/rccm.201902-0368LE. No abstract available.

3.

K-12 School Employee Sexual Abuse and Misconduct: An Examination of Policy Effectiveness.

Grant BJ, Heinecke W.

J Child Sex Abus. 2019 Feb-Mar;28(2):200-221. doi: 10.1080/10538712.2019.1580328. Epub 2019 Feb 27.

PMID:
30811309
4.

Prevention of preK-12 School Employee Sexual Misconduct and Abuse.

Grant BJ, Shakeshaft C, Mueller J.

J Child Sex Abus. 2019 Feb-Mar;28(2):125-128. doi: 10.1080/10538712.2019.1580517. Epub 2019 Feb 27.

PMID:
30811307
5.

Sexual Abuse and Exploitation of PreK-12 Students by School Personnel.

Grant BJ, Shakeshaft C, Mueller J.

J Child Sex Abus. 2019 Jan;28(1):2-6. doi: 10.1080/10538712.2019.1567139. Epub 2019 Feb 4.

PMID:
30716020
6.

Long-Term Outcome after Prolonged Mechanical Ventilation. A Long-Term Acute-Care Hospital Study.

Jubran A, Grant BJB, Duffner LA, Collins EG, Lanuza DM, Hoffman LA, Tobin MJ.

Am J Respir Crit Care Med. 2019 Jun 15;199(12):1508-1516. doi: 10.1164/rccm.201806-1131OC.

PMID:
30624956
7.

Comparative structural dynamic analysis of GTPases.

Li H, Yao XQ, Grant BJ.

PLoS Comput Biol. 2018 Nov 9;14(11):e1006364. doi: 10.1371/journal.pcbi.1006364. eCollection 2018 Nov.

8.

One-Step Conversion of Potassium Organotrifluoroborates to Metal Organoborohydrides.

Bateman CM, Beal H, Barker JE, Thompson BL, Donovan D, Grant BJ, Shooter J, Arakawa JH, Johnson S, Allen CJ, Yates JL, Kato R, Tinsley CWK, Zakharov LN, Abbey ER.

Org Lett. 2018 Jul 6;20(13):3784-3787. doi: 10.1021/acs.orglett.8b01373. Epub 2018 Jun 26.

PMID:
29944380
9.

Exposing School Employee Sexual Abuse and Misconduct: Shedding Light on a Sensitive Issue.

Henschel MM, Grant BJ.

J Child Sex Abus. 2019 Jan;28(1):26-45. doi: 10.1080/10538712.2018.1483459. Epub 2018 Jun 20.

PMID:
29924695
10.

Passing the Trash: Absence of State Laws Allows for Continued Sexual Abuse of K-12 Students by School Employees.

Grant BJ, Wilkerson S, Henschel M.

J Child Sex Abus. 2019 Jan;28(1):84-104. doi: 10.1080/10538712.2018.1483460. Epub 2018 Jun 12.

PMID:
29893638
11.

Preventing School Employee Sexual Misconduct: An Outcome Survey Analysis of Making Right Choices.

Lipson G, Grant BJ, Mueller J, Sonnich S.

J Child Sex Abus. 2019 Feb-Mar;28(2):129-143. doi: 10.1080/10538712.2018.1477002. Epub 2018 May 30.

PMID:
29847288
12.

A posttranslational modification of the mitotic kinesin Eg5 that enhances its mechanochemical coupling and alters its mitotic function.

Muretta JM, Reddy BJN, Scarabelli G, Thompson AF, Jariwala S, Major J, Venere M, Rich JN, Willard B, Thomas DD, Stumpff J, Grant BJ, Gross SP, Rosenfeld SS.

Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):E1779-E1788. doi: 10.1073/pnas.1718290115. Epub 2018 Feb 5. Erratum in: Proc Natl Acad Sci U S A. 2018 Mar 5;:.

13.

Altered chemomechanical coupling causes impaired motility of the kinesin-4 motors KIF27 and KIF7.

Yue Y, Blasius TL, Zhang S, Jariwala S, Walker B, Grant BJ, Cochran JC, Verhey KJ.

J Cell Biol. 2018 Apr 2;217(4):1319-1334. doi: 10.1083/jcb.201708179. Epub 2018 Jan 19.

14.

Factors Influencing Learner Permit Duration.

Ehsani JP, Li K, Grant BJB, Gershon P, Klauer SG, Dingus TA, Simons-Morton B.

Safety (Basel). 2017;3(1). pii: 2. doi: 10.3390/safety3010002. Epub 2016 Dec 22.

15.

A structural model for microtubule minus-end recognition and protection by CAMSAP proteins.

Atherton J, Jiang K, Stangier MM, Luo Y, Hua S, Houben K, van Hooff JJE, Joseph AP, Scarabelli G, Grant BJ, Roberts AJ, Topf M, Steinmetz MO, Baldus M, Moores CA, Akhmanova A.

Nat Struct Mol Biol. 2017 Nov;24(11):931-943. doi: 10.1038/nsmb.3483. Epub 2017 Oct 9.

16.

Navigating the conformational landscape of G protein-coupled receptor kinases during allosteric activation.

Yao XQ, Cato MC, Labudde E, Beyett TS, Tesmer JJG, Grant BJ.

J Biol Chem. 2017 Sep 29;292(39):16032-16043. doi: 10.1074/jbc.M117.807461. Epub 2017 Aug 14.

17.

Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web.

Jariwala S, Skjærven L, Yao XQ, Grant BJ.

J Vis Exp. 2017 Jul 16;(125). doi: 10.3791/55640.

18.

Structural and Molecular Mechanisms of Cytokine-Mediated Endocrine Resistance in Human Breast Cancer Cells.

Stender JD, Nwachukwu JC, Kastrati I, Kim Y, Strid T, Yakir M, Srinivasan S, Nowak J, Izard T, Rangarajan ES, Carlson KE, Katzenellenbogen JA, Yao XQ, Grant BJ, Leong HS, Lin CY, Frasor J, Nettles KW, Glass CK.

Mol Cell. 2017 Mar 16;65(6):1122-1135.e5. doi: 10.1016/j.molcel.2017.02.008.

19.

Computational and biochemical characterization of two partially overlapping interfaces and multiple weak-affinity K-Ras dimers.

Prakash P, Sayyed-Ahmad A, Cho KJ, Dolino DM, Chen W, Li H, Grant BJ, Hancock JF, Gorfe AA.

Sci Rep. 2017 Jan 9;7:40109. doi: 10.1038/srep40109.

20.

Systems Structural Biology Analysis of Ligand Effects on ERα Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.

Nwachukwu JC, Srinivasan S, Bruno NE, Nowak J, Wright NJ, Minutolo F, Rangarajan ES, Izard T, Yao XQ, Grant BJ, Kojetin DJ, Elemento O, Katzenellenbogen JA, Nettles KW.

Cell Chem Biol. 2017 Jan 19;24(1):35-45. doi: 10.1016/j.chembiol.2016.11.014. Epub 2016 Dec 29.

21.

Online interactive analysis of protein structure ensembles with Bio3D-web.

Skjærven L, Jariwala S, Yao XQ, Grant BJ.

Bioinformatics. 2016 Nov 15;32(22):3510-3512. Epub 2016 Jul 16.

22.

Rapid Characterization of Allosteric Networks with Ensemble Normal Mode Analysis.

Yao XQ, Skjærven L, Grant BJ.

J Phys Chem B. 2016 Aug 25;120(33):8276-88. doi: 10.1021/acs.jpcb.6b01991. Epub 2016 Apr 20.

23.

Dynamic Coupling and Allosteric Networks in the α Subunit of Heterotrimeric G Proteins.

Yao XQ, Malik RU, Griggs NW, Skjærven L, Traynor JR, Sivaramakrishnan S, Grant BJ.

J Biol Chem. 2016 Feb 26;291(9):4742-53. doi: 10.1074/jbc.M115.702605. Epub 2015 Dec 24.

24.

Mapping the Processivity Determinants of the Kinesin-3 Motor Domain.

Scarabelli G, Soppina V, Yao XQ, Atherton J, Moores CA, Verhey KJ, Grant BJ.

Biophys J. 2015 Oct 20;109(8):1537-40. doi: 10.1016/j.bpj.2015.08.027.

25.

Enrichment of druggable conformations from apo protein structures using cosolvent-accelerated molecular dynamics.

Kalenkiewicz A, Grant BJ, Yang CY.

Biology (Basel). 2015 Apr 21;4(2):344-66. doi: 10.3390/biology4020344.

26.

Integrating protein structural dynamics and evolutionary analysis with Bio3D.

Skjærven L, Yao XQ, Scarabelli G, Grant BJ.

BMC Bioinformatics. 2014 Dec 10;15:399. doi: 10.1186/s12859-014-0399-6.

27.

Kinesin-5 allosteric inhibitors uncouple the dynamics of nucleotide, microtubule, and neck-linker binding sites.

Scarabelli G, Grant BJ.

Biophys J. 2014 Nov 4;107(9):2204-13. doi: 10.1016/j.bpj.2014.09.019.

28.

Cost minimization using an artificial neural network sleep apnea prediction tool for sleep studies.

Teferra RA, Grant BJ, Mindel JW, Siddiqi TA, Iftikhar IH, Ajaz F, Aliling JP, Khan MS, Hoffmann SP, Magalang UJ.

Ann Am Thorac Soc. 2014 Sep;11(7):1064-74. doi: 10.1513/AnnalsATS.201404-161OC.

29.

Mapping the structural and dynamical features of kinesin motor domains.

Scarabelli G, Grant BJ.

PLoS Comput Biol. 2013;9(11):e1003329. doi: 10.1371/journal.pcbi.1003329. Epub 2013 Nov 7.

30.

Domain-opening and dynamic coupling in the α-subunit of heterotrimeric G proteins.

Yao XQ, Grant BJ.

Biophys J. 2013 Jul 16;105(2):L08-10. doi: 10.1016/j.bpj.2013.06.006.

31.

Effect of pressure support vs unassisted breathing through a tracheostomy collar on weaning duration in patients requiring prolonged mechanical ventilation: a randomized trial.

Jubran A, Grant BJ, Duffner LA, Collins EG, Lanuza DM, Hoffman LA, Tobin MJ.

JAMA. 2013 Feb 20;309(7):671-7. doi: 10.1001/jama.2013.159.

32.

LeuT conformational sampling utilizing accelerated molecular dynamics and principal component analysis.

Thomas JR, Gedeon PC, Grant BJ, Madura JD.

Biophys J. 2012 Jul 3;103(1):L1-3. doi: 10.1016/j.bpj.2012.05.002.

33.

Calcium binding and allosteric signaling mechanisms for the sarcoplasmic reticulum Ca²+ ATPase.

Kekenes-Huskey PM, Metzger VT, Grant BJ, Andrew McCammon J.

Protein Sci. 2012 Oct;21(10):1429-43. doi: 10.1002/pro.2129.

34.

Identification of potential small molecule binding pockets on Rho family GTPases.

Ortiz-Sanchez JM, Nichols SE, Sayyah J, Brown JH, McCammon JA, Grant BJ.

PLoS One. 2012;7(7):e40809. doi: 10.1371/journal.pone.0040809. Epub 2012 Jul 16.

35.

Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire.

Ostrov DA, Grant BJ, Pompeu YA, Sidney J, Harndahl M, Southwood S, Oseroff C, Lu S, Jakoncic J, de Oliveira CA, Yang L, Mei H, Shi L, Shabanowitz J, English AM, Wriston A, Lucas A, Phillips E, Mallal S, Grey HM, Sette A, Hunt DF, Buus S, Peters B.

Proc Natl Acad Sci U S A. 2012 Jun 19;109(25):9959-64. doi: 10.1073/pnas.1207934109. Epub 2012 May 29.

36.

Electrostatically biased binding of kinesin to microtubules.

Grant BJ, Gheorghe DM, Zheng W, Alonso M, Huber G, Dlugosz M, McCammon JA, Cross RA.

PLoS Biol. 2011 Nov;9(11):e1001207. doi: 10.1371/journal.pbio.1001207. Epub 2011 Nov 29.

37.

Induced fit or conformational selection? The role of the semi-closed state in the maltose binding protein.

Bucher D, Grant BJ, McCammon JA.

Biochemistry. 2011 Dec 6;50(48):10530-9. doi: 10.1021/bi201481a. Epub 2011 Nov 10.

38.

Novel allosteric sites on Ras for lead generation.

Grant BJ, Lukman S, Hocker HJ, Sayyah J, Brown JH, McCammon JA, Gorfe AA.

PLoS One. 2011;6(10):e25711. doi: 10.1371/journal.pone.0025711. Epub 2011 Oct 25.

39.

Large-scale conformational changes of Trypanosoma cruzi proline racemase predicted by accelerated molecular dynamics simulation.

de Oliveira CA, Grant BJ, Zhou M, McCammon JA.

PLoS Comput Biol. 2011 Oct;7(10):e1002178. doi: 10.1371/journal.pcbi.1002178. Epub 2011 Oct 13.

40.

Accessing a hidden conformation of the maltose binding protein using accelerated molecular dynamics.

Bucher D, Grant BJ, Markwick PR, McCammon JA.

PLoS Comput Biol. 2011 Apr;7(4):e1002034. doi: 10.1371/journal.pcbi.1002034. Epub 2011 Apr 21.

41.

Conformational selection in G-proteins: lessons from Ras and Rho.

Grant BJ, McCammon JA, Gorfe AA.

Biophys J. 2010 Dec 1;99(11):L87-9. doi: 10.1016/j.bpj.2010.10.020.

42.

The distinct conformational dynamics of K-Ras and H-Ras A59G.

Lukman S, Grant BJ, Gorfe AA, Grant GH, McCammon JA.

PLoS Comput Biol. 2010 Sep 9;6(9). pii: e1000922. doi: 10.1371/journal.pcbi.1000922.

43.

Large conformational changes in proteins: signaling and other functions.

Grant BJ, Gorfe AA, McCammon JA.

Curr Opin Struct Biol. 2010 Apr;20(2):142-7. doi: 10.1016/j.sbi.2009.12.004. Epub 2010 Jan 8. Review.

44.

Are the adverse effects of body position in patients with obstructive sleep apnea dependent on sleep stage?

Mador MJ, Choi Y, Bhat A, Dmochowski J, Braun M, Gottumukkala VA, Grant BJ.

Sleep Breath. 2010 Feb;14(1):13-7. doi: 10.1007/s11325-009-0269-z. Epub 2009 Jun 18.

PMID:
19536575
45.

Accuracy of autotitrating CPAP to estimate the residual Apnea-Hypopnea Index in patients with obstructive sleep apnea on treatment with autotitrating CPAP.

Desai H, Patel A, Patel P, Grant BJ, Mador MJ.

Sleep Breath. 2009 Nov;13(4):383-90. doi: 10.1007/s11325-009-0258-2. Epub 2009 May 1.

PMID:
19408029
46.

Novel procedure for thermal equilibration in molecular dynamics simulation.

Gallo MT, Grant BJ, Teodoro ML, Melton J, Cieplak P, Phillips GN Jr, Stec B.

Mol Simul. 2009 Apr 1;35(5):349-357.

47.

Ras conformational switching: simulating nucleotide-dependent conformational transitions with accelerated molecular dynamics.

Grant BJ, Gorfe AA, McCammon JA.

PLoS Comput Biol. 2009 Mar;5(3):e1000325. doi: 10.1371/journal.pcbi.1000325. Epub 2009 Mar 20.

48.

Hypoxemia in patients on chronic opiate therapy with and without sleep apnea.

Mogri M, Desai H, Webster L, Grant BJ, Mador MJ.

Sleep Breath. 2009 Mar;13(1):49-57. doi: 10.1007/s11325-008-0208-4. Epub 2008 Aug 6.

PMID:
18683000
49.

Central sleep apnea induced by acute ingestion of opioids.

Mogri M, Khan MIA, Grant BJB, Mador MJ.

Chest. 2008 Jun;133(6):1484-1488. doi: 10.1378/chest.07-1891.

PMID:
18574293
50.

Mapping the nucleotide and isoform-dependent structural and dynamical features of Ras proteins.

Gorfe AA, Grant BJ, McCammon JA.

Structure. 2008 Jun;16(6):885-96. doi: 10.1016/j.str.2008.03.009.

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