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NosP Signaling Modulates the NO/H-NOX-Mediated Multicomponent c-Di-GMP Network and Biofilm Formation in Shewanella oneidensis.

Nisbett LM, Binnenkade L, Bacon B, Hossain S, Kotloski NJ, Brutinel ED, Hartmann R, Drescher K, Arora DP, Muralidharan S, Thormann KM, Gralnick JA, Boon EM.

Biochemistry. 2019 Dec 3;58(48):4827-4841. doi: 10.1021/acs.biochem.9b00706. Epub 2019 Nov 18.


NanoSIMS imaging reveals metabolic stratification within current-producing biofilms.

Chadwick GL, Jiménez Otero F, Gralnick JA, Bond DR, Orphan VJ.

Proc Natl Acad Sci U S A. 2019 Oct 8;116(41):20716-20724. doi: 10.1073/pnas.1912498116. Epub 2019 Sep 23.


In situ imaging of the bacterial flagellar motor disassembly and assembly processes.

Kaplan M, Subramanian P, Ghosal D, Oikonomou CM, Pirbadian S, Starwalt-Lee R, Mageswaran SK, Ortega DR, Gralnick JA, El-Naggar MY, Jensen GJ.

EMBO J. 2019 Jul 15;38(14):e100957. doi: 10.15252/embj.2018100957. Epub 2019 May 20.


Efficient and Precise Genome Editing in Shewanella with Recombineering and CRISPR/Cas9-Mediated Counter-Selection.

Corts AD, Thomason LC, Gill RT, Gralnick JA.

ACS Synth Biol. 2019 Aug 16;8(8):1877-1889. doi: 10.1021/acssynbio.9b00188. Epub 2019 Jul 18.


Mechanisms of toxicity by and resistance to ferrous iron in anaerobic systems.

Bennett BD, Gralnick JA.

Free Radic Biol Med. 2019 Aug 20;140:167-171. doi: 10.1016/j.freeradbiomed.2019.06.027. Epub 2019 Jun 25. Review.


Secreted Flavin Cofactors for Anaerobic Respiration of Fumarate and Urocanate by Shewanella oneidensis: Cost and Role.

Kees ED, Pendleton AR, Paquete CM, Arriola MB, Kane AL, Kotloski NJ, Intile PJ, Gralnick JA.

Appl Environ Microbiol. 2019 Aug 1;85(16). pii: e00852-19. doi: 10.1128/AEM.00852-19. Print 2019 Aug 15.


Microfluidic dielectrophoresis illuminates the relationship between microbial cell envelope polarizability and electrochemical activity.

Wang Q, Jones AD 3rd, Gralnick JA, Lin L, Buie CR.

Sci Adv. 2019 Jan 11;5(1):eaat5664. doi: 10.1126/sciadv.aat5664. eCollection 2019 Jan.


A new recombineering system for precise genome-editing in Shewanella oneidensis strain MR-1 using single-stranded oligonucleotides.

Corts AD, Thomason LC, Gill RT, Gralnick JA.

Sci Rep. 2019 Jan 10;9(1):39. doi: 10.1038/s41598-018-37025-4.


Divergent Nrf Family Proteins and MtrCAB Homologs Facilitate Extracellular Electron Transfer in Aeromonas hydrophila.

Conley BE, Intile PJ, Bond DR, Gralnick JA.

Appl Environ Microbiol. 2018 Nov 15;84(23). pii: e02134-18. doi: 10.1128/AEM.02134-18. Print 2018 Dec 1.


A Novel Shewanella Isolate Enhances Corrosion by Using Metallic Iron as the Electron Donor with Fumarate as the Electron Acceptor.

Philips J, Van den Driessche N, De Paepe K, Prévoteau A, Gralnick JA, Arends JBA, Rabaey K.

Appl Environ Microbiol. 2018 Oct 1;84(20). pii: e01154-18. doi: 10.1128/AEM.01154-18. Print 2018 Oct 15.


Tracking Electron Uptake from a Cathode into Shewanella Cells: Implications for Energy Acquisition from Solid-Substrate Electron Donors.

Rowe AR, Rajeev P, Jain A, Pirbadian S, Okamoto A, Gralnick JA, El-Naggar MY, Nealson KH.

MBio. 2018 Feb 27;9(1). pii: e02203-17. doi: 10.1128/mBio.02203-17.


Survival of Anaerobic Fe2+ Stress Requires the ClpXP Protease.

Bennett BD, Redford KE, Gralnick JA.

J Bacteriol. 2018 Mar 26;200(8). pii: e00671-17. doi: 10.1128/JB.00671-17. Print 2018 Apr 15.


MgtE Homolog FicI Acts as a Secondary Ferrous Iron Importer in Shewanella oneidensis Strain MR-1.

Bennett BD, Redford KE, Gralnick JA.

Appl Environ Microbiol. 2018 Mar 1;84(6). pii: e01245-17. doi: 10.1128/AEM.01245-17. Print 2018 Mar 15.


Engineering a Native Inducible Expression System in Shewanella oneidensis to Control Extracellular Electron Transfer.

West EA, Jain A, Gralnick JA.

ACS Synth Biol. 2017 Sep 15;6(9):1627-1634. doi: 10.1021/acssynbio.6b00349. Epub 2017 Jun 5.


Acetoin production via unbalanced fermentation in Shewanella oneidensis.

Bursac T, Gralnick JA, Gescher J.

Biotechnol Bioeng. 2017 Jun;114(6):1283-1289. doi: 10.1002/bit.26243. Epub 2017 Feb 15.


Isolation and Genomic Characterization of 'Desulfuromonas soudanensis WTL', a Metal- and Electrode-Respiring Bacterium from Anoxic Deep Subsurface Brine.

Badalamenti JP, Summers ZM, Chan CH, Gralnick JA, Bond DR.

Front Microbiol. 2016 Jun 21;7:913. doi: 10.3389/fmicb.2016.00913. eCollection 2016.


Formate Metabolism in Shewanella oneidensis Generates Proton Motive Force and Prevents Growth without an Electron Acceptor.

Kane AL, Brutinel ED, Joo H, Maysonet R, VanDrisse CM, Kotloski NJ, Gralnick JA.

J Bacteriol. 2016 Mar 31;198(8):1337-46. doi: 10.1128/JB.00927-15. Print 2016 Apr.


Toward Bioremediation of Methylmercury Using Silica Encapsulated Escherichia coli Harboring the mer Operon.

Kane AL, Al-Shayeb B, Holec PV, Rajan S, Le Mieux NE, Heinsch SC, Psarska S, Aukema KG, Sarkar CA, Nater EA, Gralnick JA.

PLoS One. 2016 Jan 13;11(1):e0147036. doi: 10.1371/journal.pone.0147036. eCollection 2016.


A Ferrous Iron Exporter Mediates Iron Resistance in Shewanella oneidensis MR-1.

Bennett BD, Brutinel ED, Gralnick JA.

Appl Environ Microbiol. 2015 Nov;81(22):7938-44. doi: 10.1128/AEM.02835-15. Epub 2015 Sep 4.


Marinobacter subterrani, a genetically tractable neutrophilic Fe(II)-oxidizing strain isolated from the Soudan Iron Mine.

Bonis BM, Gralnick JA.

Front Microbiol. 2015 Jul 16;6:719. doi: 10.3389/fmicb.2015.00719. eCollection 2015.


Genome-scale metabolic network validation of Shewanella oneidensis using transposon insertion frequency analysis.

Yang H, Krumholz EW, Brutinel ED, Palani NP, Sadowsky MJ, Odlyzko AM, Gralnick JA, Libourel IG.

PLoS Comput Biol. 2014 Sep 18;10(9):e1003848. doi: 10.1371/journal.pcbi.1003848. eCollection 2014 Sep.


An arsenic-specific biosensor with genetically engineered Shewanella oneidensis in a bioelectrochemical system.

Webster DP, TerAvest MA, Doud DF, Chakravorty A, Holmes EC, Radens CM, Sureka S, Gralnick JA, Angenent LT.

Biosens Bioelectron. 2014 Dec 15;62:320-4. doi: 10.1016/j.bios.2014.07.003. Epub 2014 Jul 8.


Oxygen allows Shewanella oneidensis MR-1 to overcome mediator washout in a continuously fed bioelectrochemical system.

TerAvest MA, Rosenbaum MA, Kotloski NJ, Gralnick JA, Angenent LT.

Biotechnol Bioeng. 2014 Apr;111(4):692-9. doi: 10.1002/bit.25128.


Description of a riboflavin biosynthetic gene variant prevalent in the phylum Proteobacteria.

Brutinel ED, Dean AM, Gralnick JA.

J Bacteriol. 2013 Dec;195(24):5479-86. doi: 10.1128/JB.00651-13. Epub 2013 Oct 4.


Electrochemical analysis of Shewanella oneidensis engineered to bind gold electrodes.

Kane AL, Bond DR, Gralnick JA.

ACS Synth Biol. 2013 Feb 15;2(2):93-101. doi: 10.1021/sb300042w. Epub 2012 Aug 27.


Cultivation of an obligate Fe(II)-oxidizing lithoautotrophic bacterium using electrodes.

Summers ZM, Gralnick JA, Bond DR.

MBio. 2013 Jan 29;4(1):e00420-12. doi: 10.1128/mBio.00420-12.


Flavin electron shuttles dominate extracellular electron transfer by Shewanella oneidensis.

Kotloski NJ, Gralnick JA.

MBio. 2013 Jan 15;4(1). pii: e00553-12. doi: 10.1128/mBio.00553-12.


On conducting electron traffic across the periplasm.

Gralnick JA.

Biochem Soc Trans. 2012 Dec 1;40(6):1178-80. doi: 10.1042/BST20120129.


Preferential utilization of D-lactate by Shewanella oneidensis.

Brutinel ED, Gralnick JA.

Appl Environ Microbiol. 2012 Dec;78(23):8474-6. doi: 10.1128/AEM.02183-12. Epub 2012 Sep 21.


Anomalies of the anaerobic tricarboxylic acid cycle in Shewanella oneidensis revealed by Tn-seq.

Brutinel ED, Gralnick JA.

Mol Microbiol. 2012 Oct;86(2):273-83. doi: 10.1111/j.1365-2958.2012.08196.x. Epub 2012 Aug 27.


Reconstruction of Extracellular Respiratory Pathways for Iron(III) Reduction in Shewanella Oneidensis Strain MR-1.

Coursolle D, Gralnick JA.

Front Microbiol. 2012 Feb 21;3:56. doi: 10.3389/fmicb.2012.00056. eCollection 2012.


Nitric oxide regulation of cyclic di-GMP synthesis and hydrolysis in Shewanella woodyi.

Liu N, Xu Y, Hossain S, Huang N, Coursolle D, Gralnick JA, Boon EM.

Biochemistry. 2012 Mar 13;51(10):2087-99. doi: 10.1021/bi201753f. Epub 2012 Mar 5.


Shuttling happens: soluble flavin mediators of extracellular electron transfer in Shewanella.

Brutinel ED, Gralnick JA.

Appl Microbiol Biotechnol. 2012 Jan;93(1):41-8. doi: 10.1007/s00253-011-3653-0. Epub 2011 Nov 10. Review.


Construction and elementary mode analysis of a metabolic model for Shewanella oneidensis MR-1.

Flynn CM, Hunt KA, Gralnick JA, Srienc F.

Biosystems. 2012 Feb;107(2):120-8. doi: 10.1016/j.biosystems.2011.10.003. Epub 2011 Oct 17.


Nile red detection of bacterial hydrocarbons and ketones in a high-throughput format.

Pinzon NM, Aukema KG, Gralnick JA, Wackett LP.

MBio. 2011 Jun 28;2(4):e00109-11. doi: 10.1128/mBio.00109-11. Print 2011.


Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth.

Sundararajan A, Kurowski J, Yan T, Klingeman DM, Joachimiak MP, Zhou J, Naranjo B, Gralnick JA, Fields MW.

Appl Environ Microbiol. 2011 Jul;77(13):4647-56. doi: 10.1128/AEM.03003-10. Epub 2011 May 20.


Deciphering the electron transport pathway for graphene oxide reduction by Shewanella oneidensis MR-1.

Jiao Y, Qian F, Li Y, Wang G, Saltikov CW, Gralnick JA.

J Bacteriol. 2011 Jul;193(14):3662-5. doi: 10.1128/JB.00201-11. Epub 2011 May 20.


Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1.

Cruz-García C, Murray AE, Rodrigues JL, Gralnick JA, McCue LA, Romine MF, Löffler FE, Tiedje JM.

BMC Microbiol. 2011 Mar 30;11:64. doi: 10.1186/1471-2180-11-64.


Towards electrosynthesis in shewanella: energetics of reversing the mtr pathway for reductive metabolism.

Ross DE, Flynn JM, Baron DB, Gralnick JA, Bond DR.

PLoS One. 2011 Feb 2;6(2):e16649. doi: 10.1371/journal.pone.0016649.


Enabling unbalanced fermentations by using engineered electrode-interfaced bacteria.

Flynn JM, Ross DE, Hunt KA, Bond DR, Gralnick JA.

MBio. 2010 Nov 2;1(5). pii: e00190-10. doi: 10.1128/mBio.00190-10.


An essential role for UshA in processing of extracellular flavin electron shuttles by Shewanella oneidensis.

Covington ED, Gelbmann CB, Kotloski NJ, Gralnick JA.

Mol Microbiol. 2010 Oct;78(2):519-32. doi: 10.1111/j.1365-2958.2010.07353.x. Epub 2010 Sep 14.


Modularity of the Mtr respiratory pathway of Shewanella oneidensis strain MR-1.

Coursolle D, Gralnick JA.

Mol Microbiol. 2010 Aug;77(4):995-1008. doi: 10.1111/j.1365-2958.2010.07266.x. Epub 2010 Jun 28.


Enhancement of survival and electricity production in an engineered bacterium by light-driven proton pumping.

Johnson ET, Baron DB, Naranjo B, Bond DR, Schmidt-Dannert C, Gralnick JA.

Appl Environ Microbiol. 2010 Jul;76(13):4123-9. doi: 10.1128/AEM.02425-09. Epub 2010 May 7.


Structure, function, and insights into the biosynthesis of a head-to-head hydrocarbon in Shewanella oneidensis strain MR-1.

Sukovich DJ, Seffernick JL, Richman JE, Hunt KA, Gralnick JA, Wackett LP.

Appl Environ Microbiol. 2010 Jun;76(12):3842-9. doi: 10.1128/AEM.00433-10. Epub 2010 Apr 23.


Widespread head-to-head hydrocarbon biosynthesis in bacteria and role of OleA.

Sukovich DJ, Seffernick JL, Richman JE, Gralnick JA, Wackett LP.

Appl Environ Microbiol. 2010 Jun;76(12):3850-62. doi: 10.1128/AEM.00436-10. Epub 2010 Apr 23.


Substrate-level phosphorylation is the primary source of energy conservation during anaerobic respiration of Shewanella oneidensis strain MR-1.

Hunt KA, Flynn JM, Naranjo B, Shikhare ID, Gralnick JA.

J Bacteriol. 2010 Jul;192(13):3345-51. doi: 10.1128/JB.00090-10. Epub 2010 Apr 16.


The Mtr respiratory pathway is essential for reducing flavins and electrodes in Shewanella oneidensis.

Coursolle D, Baron DB, Bond DR, Gralnick JA.

J Bacteriol. 2010 Jan;192(2):467-74. doi: 10.1128/JB.00925-09. Epub 2009 Nov 6.


Redox signaling between DNA repair proteins for efficient lesion detection.

Boal AK, Genereux JC, Sontz PA, Gralnick JA, Newman DK, Barton JK.

Proc Natl Acad Sci U S A. 2009 Sep 8;106(36):15237-42. doi: 10.1073/pnas.0908059106. Epub 2009 Aug 31.


Electrochemical measurement of electron transfer kinetics by Shewanella oneidensis MR-1.

Baron D, LaBelle E, Coursolle D, Gralnick JA, Bond DR.

J Biol Chem. 2009 Oct 16;284(42):28865-73. doi: 10.1074/jbc.M109.043455. Epub 2009 Aug 6.


Sphingobacterium sp. strain PM2-P1-29 harbours a functional tet(X) gene encoding for the degradation of tetracycline.

Ghosh S, Sadowsky MJ, Roberts MC, Gralnick JA, LaPara TM.

J Appl Microbiol. 2009 Apr;106(4):1336-42. doi: 10.1111/j.1365-2672.2008.04101.x. Epub 2009 Jan 30.

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