Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 118

1.

The TFIIB tip domain couples transcription initiation to events involved in RNA processing.

Tran K, Gralla JD.

J Biol Chem. 2010 Dec 17;285(51):39580-7. doi: 10.1074/jbc.M110.171850. Epub 2010 Sep 29.

2.

Remodeling and activation of Escherichia coli RNA polymerase by osmolytes.

Gralla JD, Huo YX.

Biochemistry. 2008 Dec 16;47(50):13189-96. doi: 10.1021/bi801075x.

PMID:
19053283
3.

General stress response signalling: unwrapping transcription complexes by DNA relaxation via the sigma38 C-terminal domain.

Huo YX, Rosenthal AZ, Gralla JD.

Mol Microbiol. 2008 Oct;70(2):369-78. doi: 10.1111/j.1365-2958.2008.06412.x. Epub 2008 Aug 22.

4.

Control of the timing of promoter escape and RNA catalysis by the transcription factor IIb fingertip.

Tran K, Gralla JD.

J Biol Chem. 2008 Jun 6;283(23):15665-71. doi: 10.1074/jbc.M801439200. Epub 2008 Apr 14.

5.

Regulation of transcription by acetate in Escherichia coli: in vivo and in vitro comparisons.

Rosenthal AZ, Kim Y, Gralla JD.

Mol Microbiol. 2008 May;68(4):907-17. doi: 10.1111/j.1365-2958.2008.06186.x. Epub 2008 Mar 4.

6.

Poising of Escherichia coli RNA polymerase and its release from the sigma 38 C-terminal tail for osmY transcription.

Rosenthal AZ, Kim Y, Gralla JD.

J Mol Biol. 2008 Feb 29;376(4):938-49. doi: 10.1016/j.jmb.2007.12.037. Epub 2008 Jan 16.

7.
8.

Potassium glutamate as a transcriptional inhibitor during bacterial osmoregulation.

Gralla JD, Vargas DR.

EMBO J. 2006 Apr 5;25(7):1515-21. Epub 2006 Mar 16.

9.

Osmolyte-induced transcription: -35 region elements and recognition by sigma38 (rpoS).

Rosenthal AZ, Hu M, Gralla JD.

Mol Microbiol. 2006 Feb;59(3):1052-61.

10.

TFIIH XPB mutants suggest a unified bacterial-like mechanism for promoter opening but not escape.

Lin YC, Choi WS, Gralla JD.

Nat Struct Mol Biol. 2005 Jul;12(7):603-7. Epub 2005 Jun 5.

PMID:
15937491
11.

Stimulation of the XPB ATP-dependent helicase by the beta subunit of TFIIE.

Lin YC, Gralla JD.

Nucleic Acids Res. 2005 May 25;33(9):3072-81. Print 2005.

13.

Nucleotide-dependent isomerization of Escherichia coli RNA polymerase.

Lew CM, Gralla JD.

Biochemistry. 2004 Oct 5;43(39):12660-6.

PMID:
15449955
14.

The Schizosaccharomyces pombe open promoter bubble: mammalian-like arrangement and properties.

Choi WS, Lin YC, Gralla JD.

J Mol Biol. 2004 Jul 23;340(5):981-9.

PMID:
15236961
15.

Osmo-regulation of bacterial transcription via poised RNA polymerase.

Lee SJ, Gralla JD.

Mol Cell. 2004 Apr 23;14(2):153-62.

16.

Mechanism of stimulation of ribosomal promoters by binding of the +1 and +2 nucleotides.

Lew CM, Gralla JD.

J Biol Chem. 2004 May 7;279(19):19481-5. Epub 2004 Mar 9.

17.

Roles for inhibitory interactions in the use of the -10 promoter element by sigma 70 holoenzyme.

Fenton MS, Gralla JD.

J Biol Chem. 2003 Oct 10;278(41):39669-74. Epub 2003 Aug 4.

18.
19.
20.

Promoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization.

Lee SJ, Gralla JD.

J Biol Chem. 2002 Dec 6;277(49):47420-7. Epub 2002 Sep 25.

21.

New roles for conserved regions within a sigma 54-dependent enhancer-binding protein.

Lew CM, Gralla JD.

J Biol Chem. 2002 Nov 1;277(44):41517-24. Epub 2002 Aug 16.

22.

In vitro transcription and start site selection in Schizosaccharomyces pombe.

Choi WS, Yan M, Nusinow D, Gralla JD.

J Mol Biol. 2002 Jun 21;319(5):1005-13.

PMID:
12079343
23.

Function of the bacterial TATAAT -10 element as single-stranded DNA during RNA polymerase isomerization.

Fenton MS, Gralla JD.

Proc Natl Acad Sci U S A. 2001 Jul 31;98(16):9020-5. Epub 2001 Jul 24.

24.

Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides.

Lee SJ, Gralla JD.

J Biol Chem. 2001 Aug 10;276(32):30064-71. Epub 2001 May 25.

25.

Roles for the C-terminal region of sigma 54 in transcriptional silencing and DNA binding.

Wang L, Gralla JD.

J Biol Chem. 2001 Mar 23;276(12):8979-86. Epub 2000 Dec 20.

26.

TATA-flanking sequences influence the rate and stability of TATA-binding protein and TFIIB binding.

Wolner BS, Gralla JD.

J Biol Chem. 2001 Mar 2;276(9):6260-6. Epub 2000 Nov 28.

28.

The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor.

Buck M, Gallegos MT, Studholme DJ, Guo Y, Gralla JD.

J Bacteriol. 2000 Aug;182(15):4129-36. Review. No abstract available.

29.

Signaling through sigma.

Gralla JD.

Nat Struct Biol. 2000 Jul;7(7):530-2. No abstract available.

PMID:
10876232
30.

Roles for non-TATA core promoter sequences in transcription and factor binding.

Wolner BS, Gralla JD.

Mol Cell Biol. 2000 May;20(10):3608-15.

31.
32.
33.
34.
35.
36.

Multiple in vivo roles for the -12-region elements of sigma 54 promoters.

Wang L, Gralla JD.

J Bacteriol. 1998 Nov;180(21):5626-31.

37.
38.

Promoter opening via a DNA fork junction binding activity.

Guo Y, Gralla JD.

Proc Natl Acad Sci U S A. 1998 Sep 29;95(20):11655-60.

39.
40.

Genomic position analyses and the transcription machinery.

PĂ©rez-Rueda E, Gralla JD, Collado-Vides J.

J Mol Biol. 1998 Jan 16;275(2):165-70.

PMID:
9466899
41.

Promoter activation via a cyclic AMP response element in vitro.

Wolner BS, Gralla JD.

J Biol Chem. 1997 Dec 19;272(51):32301-7.

42.
43.

Isolation and properties of enhancer-bypass mutants of sigma 54.

Syed A, Gralla JD.

Mol Microbiol. 1997 Mar;23(5):987-95.

44.
46.

Activation and repression of E. coli promoters.

Gralla JD.

Curr Opin Genet Dev. 1996 Oct;6(5):526-30. Review.

PMID:
8939721
48.

Global steps during initiation by RNA polymerase II.

Gralla JD.

Methods Enzymol. 1996;273:99-110. Review. No abstract available.

PMID:
8791602
49.

Abortive initiation and first bond formation at an activated adenovirus E4 promoter.

Jiang Y, Yan M, Gralla JD.

J Biol Chem. 1995 Nov 10;270(45):27332-8.

50.

Supplemental Content

Loading ...
Support Center