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Items: 1 to 50 of 165

1.

Visualization methods for differential expression analysis.

Rutter L, Moran Lauter AN, Graham MA, Cook D.

BMC Bioinformatics. 2019 Sep 6;20(1):458. doi: 10.1186/s12859-019-2968-1.

2.

Using RNA-seq to characterize responses to 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor herbicide resistance in waterhemp (Amaranthus tuberculatus).

Kohlhase DR, O'Rourke JA, Owen MDK, Graham MA.

BMC Plant Biol. 2019 May 6;19(1):182. doi: 10.1186/s12870-019-1795-x.

3.

Rpp1 Encodes a ULP1-NBS-LRR Protein That Controls Immunity to Phakopsora pachyrhizi in Soybean.

Pedley KF, Pandey AK, Ruck A, Lincoln LM, Whitham SA, Graham MA.

Mol Plant Microbe Interact. 2019 Jan;32(1):120-133. doi: 10.1094/MPMI-07-18-0198-FI. Epub 2018 Nov 19.

PMID:
30303765
4.

The MAPK Kinase Kinase GmMEKK1 Regulates Cell Death and Defense Responses.

Xu HY, Zhang C, Li ZC, Wang ZR, Jiang XX, Shi YF, Tian SN, Braun E, Mei Y, Qiu WL, Li S, Wang B, Xu J, Navarre D, Ren D, Cheng N, Nakata PA, Graham MA, Whitham SA, Liu JZ.

Plant Physiol. 2018 Oct;178(2):907-922. doi: 10.1104/pp.18.00903. Epub 2018 Aug 29.

5.

Evolution of steroid hormones in reproductive females of the threespine stickleback fish.

Graham MA, Earley RL, Baker JA, Foster SA.

Gen Comp Endocrinol. 2018 Nov 1;268:71-79. doi: 10.1016/j.ygcen.2018.08.003. Epub 2018 Aug 2.

PMID:
30077793
6.

Leveraging RNA-Seq to Characterize Resistance to Brown Stem Rot and the Rbs3 Locus in Soybean.

McCabe CE, Cianzio SR, O'Rourke JA, Graham MA.

Mol Plant Microbe Interact. 2018 Oct;31(10):1083-1094. doi: 10.1094/MPMI-01-18-0009-R. Epub 2018 Aug 20.

7.

Enantioselective Rhodium(III)-Catalyzed Markovnikov Hydroboration of Unactivated Terminal Alkenes.

Smith JR, Collins BSL, Hesse MJ, Graham MA, Myers EL, Aggarwal VK.

J Am Chem Soc. 2017 Jul 12;139(27):9148-9151. doi: 10.1021/jacs.7b05149. Epub 2017 Jun 30.

8.

Diabetes Screening and Prevention in a High-Risk, Medically Isolated Border Community.

Millard AV, Graham MA, Mier N, Moralez J, Perez-Patron M, Wickwire B, May ML, Ory MG.

Front Public Health. 2017 Jun 12;5:135. doi: 10.3389/fpubh.2017.00135. eCollection 2017.

9.

Structure-Guided Discovery of Potent and Selective Inhibitors of ERK1/2 from a Modestly Active and Promiscuous Chemical Start Point.

Ward RA, Bethel P, Cook C, Davies E, Debreczeni JE, Fairley G, Feron L, Flemington V, Graham MA, Greenwood R, Griffin N, Hanson L, Hopcroft P, Howard TD, Hudson J, James M, Jones CD, Jones CR, Lamont S, Lewis R, Lindsay N, Roberts K, Simpson I, St-Gallay S, Swallow S, Tang J, Tonge M, Wang Z, Zhai B.

J Med Chem. 2017 Apr 27;60(8):3438-3450. doi: 10.1021/acs.jmedchem.7b00267. Epub 2017 Apr 14.

PMID:
28376306
10.

Acute forces required for fatal compression asphyxia: A biomechanical model and historical comparisons.

Kroll MW, Still GK, Neuman TS, Graham MA, Griffin LV.

Med Sci Law. 2017 Apr;57(2):61-68. doi: 10.1177/0025802417695711. Epub 2017 Apr 3.

PMID:
28372525
11.

Adolescent chronic restraint stress (aCRS) elicits robust depressive-like behavior in freely cycling, adult female rats without increasing anxiety-like behaviors.

Hibicke M, Graham MA, Hayslett RL.

Exp Clin Psychopharmacol. 2017 Apr;25(2):74-83. doi: 10.1037/pha0000119. Epub 2017 Mar 13.

PMID:
28287791
12.

Development and verification of a pharmacokinetic model to optimize physiologic replacement of rhIGF-1/rhIGFBP-3 in preterm infants.

Chung JK, Hallberg B, Hansen-Pupp I, Graham MA, Fetterly G, Sharma J, Tocoian A, Kreher NC, Barton N, Hellström A, Ley D.

Pediatr Res. 2017 Mar;81(3):504-510. doi: 10.1038/pr.2016.255. Epub 2016 Nov 21.

PMID:
27870826
13.

Optimization of a Series of Bivalent Triazolopyridazine Based Bromodomain and Extraterminal Inhibitors: The Discovery of (3R)-4-[2-[4-[1-(3-Methoxy-[1,2,4]triazolo[4,3-b]pyridazin-6-yl)-4-piperidyl]phenoxy]ethyl]-1,3-dimethyl-piperazin-2-one (AZD5153).

Bradbury RH, Callis R, Carr GR, Chen H, Clark E, Feron L, Glossop S, Graham MA, Hattersley M, Jones C, Lamont SG, Ouvry G, Patel A, Patel J, Rabow AA, Roberts CA, Stokes S, Stratton N, Walker GE, Ward L, Whalley D, Whittaker D, Wrigley G, Waring MJ.

J Med Chem. 2016 Sep 8;59(17):7801-17. doi: 10.1021/acs.jmedchem.6b00070. Epub 2016 Aug 24.

PMID:
27528113
14.

Transcriptome response of Lolium arundinaceum to its fungal endophyte Epichloë coenophiala.

Dinkins RD, Nagabhyru P, Graham MA, Boykin D, Schardl CL.

New Phytol. 2017 Jan;213(1):324-337. doi: 10.1111/nph.14103. Epub 2016 Aug 1.

15.

Virus-Induced Gene Silencing and Transient Gene Expression in Soybean (Glycine max) Using Bean Pod Mottle Virus Infectious Clones.

Whitham SA, Lincoln LM, Chowda-Reddy RV, Dittman JD, O'Rourke JA, Graham MA.

Curr Protoc Plant Biol. 2016 Mar;1(2):263-283. doi: 10.1002/cppb.20012.

PMID:
30775861
16.

Antimicrobial properties of mucus from the brown garden snail Helix aspersa.

Pitt SJ, Graham MA, Dedi CG, Taylor-Harris PM, Gunn A.

Br J Biomed Sci. 2015;72(4):174-81; quiz 208.

PMID:
26738399
17.

A Phase I Study of the SMAC-Mimetic Birinapant in Adults with Refractory Solid Tumors or Lymphoma.

Amaravadi RK, Schilder RJ, Martin LP, Levin M, Graham MA, Weng DE, Adjei AA.

Mol Cancer Ther. 2015 Nov;14(11):2569-75. doi: 10.1158/1535-7163.MCT-15-0475. Epub 2015 Sep 2.

18.

Iterative development and the scope for plasticity: contrasts among trait categories in an adaptive radiation.

Foster SA, Wund MA, Graham MA, Earley RL, Gardiner R, Kearns T, Baker JA.

Heredity (Edinb). 2015 Oct;115(4):335-48. doi: 10.1038/hdy.2015.66. Epub 2015 Aug 5. Review.

19.

The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies.

O'Rourke JA, Fu F, Bucciarelli B, Yang SS, Samac DA, Lamb JF, Monteros MJ, Graham MA, Gronwald JW, Krom N, Li J, Dai X, Zhao PX, Vance CP.

BMC Genomics. 2015 Jul 7;16:502. doi: 10.1186/s12864-015-1718-7.

20.

Structure-Guided Design of Highly Selective and Potent Covalent Inhibitors of ERK1/2.

Ward RA, Colclough N, Challinor M, Debreczeni JE, Eckersley K, Fairley G, Feron L, Flemington V, Graham MA, Greenwood R, Hopcroft P, Howard TD, James M, Jones CD, Jones CR, Renshaw J, Roberts K, Snow L, Tonge M, Yeung K.

J Med Chem. 2015 Jun 11;58(11):4790-801. doi: 10.1021/acs.jmedchem.5b00466. Epub 2015 May 28.

PMID:
25977981
21.

Gaining insight into soybean defense responses using functional genomics approaches.

Liu JZ, Graham MA, Pedley KF, Whitham SA.

Brief Funct Genomics. 2015 Jul;14(4):283-90. doi: 10.1093/bfgp/elv009. Epub 2015 Mar 31. Review.

PMID:
25832523
22.

Environmental Justice and Community-Based Research in Texas Borderland Colonias.

Cantu A, Graham MA, Millard AV, Flores I, Mugleston MK, Reyes IY, Carbajal ES.

Public Health Nurs. 2016 Jan-Feb;33(1):65-72. doi: 10.1111/phn.12187. Epub 2015 Mar 18.

23.

Discovery and optimization of a novel series of Dyrk1B kinase inhibitors to explore a MEK resistance hypothesis.

Kettle JG, Ballard P, Bardelle C, Cockerill M, Colclough N, Critchlow SE, Debreczeni J, Fairley G, Fillery S, Graham MA, Goodwin L, Guichard S, Hudson K, Ward RA, Whittaker D.

J Med Chem. 2015 Mar 26;58(6):2834-44. doi: 10.1021/acs.jmedchem.5b00098. Epub 2015 Mar 12.

PMID:
25738750
24.

Synthesis of functionalized cyanopyrazoles via magnesium bases.

Dishington A, Feron JL, Gill K, Graham MA, Hollingsworth I, Pink JH, Roberts A, Simpson I, Tatton M.

Org Lett. 2014 Dec 5;16(23):6120-3. doi: 10.1021/ol502977a. Epub 2014 Nov 13.

PMID:
25393394
25.

Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress.

Belamkar V, Weeks NT, Bharti AK, Farmer AD, Graham MA, Cannon SB.

BMC Genomics. 2014 Nov 3;15:950. doi: 10.1186/1471-2164-15-950.

26.

Identification of candidate genes involved in early iron deficiency chlorosis signaling in soybean (Glycine max) roots and leaves.

Moran Lauter AN, Peiffer GA, Yin T, Whitham SA, Cook D, Shoemaker RC, Graham MA.

BMC Genomics. 2014 Aug 22;15:702. doi: 10.1186/1471-2164-15-702.

27.

Birinapant, a smac-mimetic with improved tolerability for the treatment of solid tumors and hematological malignancies.

Condon SM, Mitsuuchi Y, Deng Y, LaPorte MG, Rippin SR, Haimowitz T, Alexander MD, Kumar PT, Hendi MS, Lee YH, Benetatos CA, Yu G, Kapoor GS, Neiman E, Seipel ME, Burns JM, Graham MA, McKinlay MA, Li X, Wang J, Shi Y, Feltham R, Bettjeman B, Cumming MH, Vince JE, Khan N, Silke J, Day CL, Chunduru SK.

J Med Chem. 2014 May 8;57(9):3666-77. doi: 10.1021/jm500176w. Epub 2014 Apr 15.

PMID:
24684347
28.

Birinapant (TL32711), a bivalent SMAC mimetic, targets TRAF2-associated cIAPs, abrogates TNF-induced NF-κB activation, and is active in patient-derived xenograft models.

Benetatos CA, Mitsuuchi Y, Burns JM, Neiman EM, Condon SM, Yu G, Seipel ME, Kapoor GS, Laporte MG, Rippin SR, Deng Y, Hendi MS, Tirunahari PK, Lee YH, Haimowitz T, Alexander MD, Graham MA, Weng D, Shi Y, McKinlay MA, Chunduru SK.

Mol Cancer Ther. 2014 Apr;13(4):867-79. doi: 10.1158/1535-7163.MCT-13-0798. Epub 2014 Feb 21. Erratum in: Mol Cancer Ther. 2014 Sep;13(9):2246-7. Dosage error in article text.

29.

The haustorial transcriptomes of Uromyces appendiculatus and Phakopsora pachyrhizi and their candidate effector families.

Link TI, Lang P, Scheffler BE, Duke MV, Graham MA, Cooper B, Tucker ML, van de Mortel M, Voegele RT, Mendgen K, Baum TJ, Whitham SA.

Mol Plant Pathol. 2014 May;15(4):379-93. doi: 10.1111/mpp.12099. Epub 2013 Dec 17.

30.

Novel and versatile synthesis of disubstituted 1,2-dihydro-1,2,4-triazol-3-ones.

Graham MA, Bethel PA, Burgess J, Fairley G, Glossop SC, Greenwood RD, Jones CD, Lovell S, Swallow S.

Org Lett. 2013 Dec 6;15(23):6078-81. doi: 10.1021/ol402920z. Epub 2013 Nov 18.

PMID:
24246051
31.

A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar.

O'Rourke JA, Iniguez LP, Bucciarelli B, Roessler J, Schmutz J, McClean PE, Jackson SA, Hernandez G, Graham MA, Stupar RM, Vance CP.

Front Plant Sci. 2013 Jun 25;4:210. doi: 10.3389/fpls.2013.00210. eCollection 2013.

32.

Replication protein A subunit 3 and the iron efficiency response in soybean.

Atwood SE, O'Rourke JA, Peiffer GA, Yin T, Majumder M, Zhang C, Cianzio SR, Hill JH, Cook D, Whitham SA, Shoemaker RC, Graham MA.

Plant Cell Environ. 2014 Jan;37(1):213-34. doi: 10.1111/pce.12147. Epub 2013 Jul 22.

33.

Temporal and spatial evolution of therapy-induced tumor apoptosis detected by caspase-3-selective molecular imaging.

Nguyen QD, Lavdas I, Gubbins J, Smith G, Fortt R, Carroll LS, Graham MA, Aboagye EO.

Clin Cancer Res. 2013 Jul 15;19(14):3914-24. doi: 10.1158/1078-0432.CCR-12-3814. Epub 2013 May 31.

34.

The stability of electrically induced ventricular fibrillation.

Kroll MW, Walcott GP, Ideker RE, Graham MA, Calkins H, Lakkireddy D, Luceri RM, Panescu D.

Conf Proc IEEE Eng Med Biol Soc. 2012;2012:6377-81. doi: 10.1109/EMBC.2012.6347453.

PMID:
23367388
35.

Sulfonyl-morpholino-pyrimidines: SAR and development of a novel class of selective mTOR kinase inhibitor.

Finlay MR, Buttar D, Critchlow SE, Dishington AP, Fillery SM, Fisher E, Glossop SC, Graham MA, Johnson T, Lamont GM, Mutton S, Perkins P, Pike KG, Slater AM.

Bioorg Med Chem Lett. 2012 Jun 15;22(12):4163-8. doi: 10.1016/j.bmcl.2012.04.036. Epub 2012 Apr 13.

PMID:
22607682
36.

An overview of nonpathological geroneuropsychology: implications for nursing practice and research.

Vance DE, Graham MA, Fazeli PL, Heaton K, Moneyham L.

J Neurosci Nurs. 2012 Feb;44(1):43-53. doi: 10.1097/JNN.0b013e31823ae48b. Review.

37.

Soybean homologs of MPK4 negatively regulate defense responses and positively regulate growth and development.

Liu JZ, Horstman HD, Braun E, Graham MA, Zhang C, Navarre D, Qiu WL, Lee Y, Nettleton D, Hill JH, Whitham SA.

Plant Physiol. 2011 Nov;157(3):1363-78. doi: 10.1104/pp.111.185686. Epub 2011 Aug 30.

38.

Biphasic gene expression changes elicited by Phakopsora pachyrhizi in soybean correlate with fungal penetration and haustoria formation.

Schneider KT, van de Mortel M, Bancroft TJ, Braun E, Nettleton D, Nelson RT, Frederick RD, Baum TJ, Graham MA, Whitham SA.

Plant Physiol. 2011 Sep;157(1):355-71. doi: 10.1104/pp.111.181149. Epub 2011 Jul 26.

39.

The importance of the N-H bond in Ru/TsDPEN complexes for asymmetric transfer hydrogenation of ketones and imines.

Soni R, Cheung FK, Clarkson GC, Martins JE, Graham MA, Wills M.

Org Biomol Chem. 2011 May 7;9(9):3290-4. doi: 10.1039/c1ob05208j. Epub 2011 Mar 24.

PMID:
21437316
40.

Gene expression patterns are correlated with genomic and genic structure in soybean.

Woody JL, Severin AJ, Bolon YT, Joseph B, Diers BW, Farmer AD, Weeks N, Muehlbauer GJ, Nelson RT, Grant D, Specht JE, Graham MA, Cannon SB, May GD, Vance CP, Shoemaker RC.

Genome. 2011 Jan;54(1):10-8. doi: 10.1139/G10-090.

PMID:
21217801
41.

Pilot of a diabetes primary prevention program in a hard-to-reach, low-income, immigrant Hispanic population.

Millard AV, Graham MA, Wang X, Mier N, Sánchez ER, Flores I, Elizondo-Fournier M.

J Immigr Minor Health. 2011 Oct;13(5):906-13. doi: 10.1007/s10903-010-9412-y.

PMID:
21061063
42.

Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2.

Pandey AK, Yang C, Zhang C, Graham MA, Horstman HD, Lee Y, Zabotina OA, Hill JH, Pedley KF, Whitham SA.

Mol Plant Microbe Interact. 2011 Feb;24(2):194-206. doi: 10.1094/MPMI-08-10-0187.

43.

RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome.

Severin AJ, Woody JL, Bolon YT, Joseph B, Diers BW, Farmer AD, Muehlbauer GJ, Nelson RT, Grant D, Specht JE, Graham MA, Cannon SB, May GD, Vance CP, Shoemaker RC.

BMC Plant Biol. 2010 Aug 5;10:160. doi: 10.1186/1471-2229-10-160.

44.

Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean.

Bolon YT, Joseph B, Cannon SB, Graham MA, Diers BW, Farmer AD, May GD, Muehlbauer GJ, Specht JE, Tu ZJ, Weeks N, Xu WW, Shoemaker RC, Vance CP.

BMC Plant Biol. 2010 Mar 3;10:41. doi: 10.1186/1471-2229-10-41.

45.

Kinetic and structural studies on 'tethered' Ru(II) arene ketone reduction catalysts.

Cheung FK, Clarke AJ, Clarkson GJ, Fox DJ, Graham MA, Lin C, Crivillé AL, Wills M.

Dalton Trans. 2010 Feb 7;39(5):1395-402. doi: 10.1039/b915932k. Epub 2009 Dec 1.

PMID:
20104368
46.

Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response.

O'Rourke JA, Nelson RT, Grant D, Schmutz J, Grimwood J, Cannon S, Vance CP, Graham MA, Shoemaker RC.

BMC Genomics. 2009 Aug 13;10:376. doi: 10.1186/1471-2164-10-376.

47.

Identification and analyses of candidate genes for rpp4-mediated resistance to Asian soybean rust in soybean.

Meyer JD, Silva DC, Yang C, Pedley KF, Zhang C, van de Mortel M, Hill JH, Shoemaker RC, Abdelnoor RV, Whitham SA, Graham MA.

Plant Physiol. 2009 May;150(1):295-307. doi: 10.1104/pp.108.134551. Epub 2009 Feb 27.

48.

Sensitive swine and TASER electronic control devices.

Kroll MW, Calkins H, Luceri RM, Graham MA, Heegaard WG.

Acad Emerg Med. 2008 Jul;15(7):695-6; author reply 696-8. No abstract available.

49.

The discovery of AZD5597, a potent imidazole pyrimidine amide CDK inhibitor suitable for intravenous dosing.

Jones CD, Andrews DM, Barker AJ, Blades K, Daunt P, East S, Geh C, Graham MA, Johnson KM, Loddick SA, McFarland HM, McGregor A, Moss L, Rudge DA, Simpson PB, Swain ML, Tam KY, Tucker JA, Walker M.

Bioorg Med Chem Lett. 2008 Dec 15;18(24):6369-73. doi: 10.1016/j.bmcl.2008.10.102. Epub 2008 Oct 25.

PMID:
18996007
50.

TASER safety.

Kroll MW, Calkins H, Luceri RM, Graham MA, Heegaard WG.

CMAJ. 2008 Sep 23;179(7):677-8. doi: 10.1503/cmaj.1080080. No abstract available.

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