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Items: 1 to 50 of 143

1.

Targeted Proteomics as a Tool for Quantifying Urine-Based Biomarkers.

Mohan SV, Nayakanti DS, Sathe G, George IA, Gowda H, Kumar P.

Methods Mol Biol. 2020;2051:277-295. doi: 10.1007/978-1-4939-9744-2_12.

PMID:
31552634
2.

Survey of less Invasive Surfactant Administration in England, slow adoption and variable practice.

Bhayat S, Kaur A, Premadeva I, Reynolds P, Gowda H.

Acta Paediatr. 2019 Aug 31. doi: 10.1111/apa.14995. [Epub ahead of print]

PMID:
31471992
3.

Chronic Exposure to Chewing Tobacco Induces Metabolic Reprogramming and Cancer Stem Cell-Like Properties in Esophageal Epithelial Cells.

Datta KK, Patil S, Patel K, Babu N, Raja R, Nanjappa V, Mangalaparthi KK, Dhaka B, Rajagopalan P, Deolankar SC, Kannan R, Kumar P, Prasad TSK, Mathur PP, Kumari A, Manoharan M, Coral K, Murugan S, Sidransky D, Gupta R, Gupta R, Khanna-Gupta A, Chatterjee A, Gowda H.

Cells. 2019 Aug 21;8(9). pii: E949. doi: 10.3390/cells8090949.

4.

Altered transcriptional regulatory proteins in glioblastoma and YBX1 as a potential regulator of tumor invasion.

Gupta MK, Polisetty RV, Sharma R, Ganesh RA, Gowda H, Purohit AK, Ankathi P, Prasad K, Mariswamappa K, Lakshmikantha A, Uppin MS, Sundaram C, Gautam P, Sirdeshmukh R.

Sci Rep. 2019 Jul 29;9(1):10986. doi: 10.1038/s41598-019-47360-9.

5.

Chronic shisha exposure alters phosphoproteome of oral keratinocytes.

Patil S, Rajagopalan P, Patel K, Subbannayya T, Babu N, Mohan SV, Advani J, Sathe G, Bhandi S, Solanki HS, Sidransky D, Chatterjee A, Gowda H, Ferrari M.

J Cell Commun Signal. 2019 Sep;13(3):281-289. doi: 10.1007/s12079-019-00528-4. Epub 2019 Jul 19.

6.

Circulating Tumor Cell cluster phenotype allows monitoring response to treatment and predicts survival.

Balakrishnan A, Koppaka D, Anand A, Deb B, Grenci G, Viasnoff V, Thompson EW, Gowda H, Bhat R, Rangarajan A, Thiery JP, Govind Babu K, Kumar P.

Sci Rep. 2019 May 28;9(1):7933. doi: 10.1038/s41598-019-44404-y.

7.

Surgery, Octreotide, Temozolomide, Bevacizumab, Radiotherapy, and Pegvisomant Treatment of an AIP Mutation‚ÄíPositive Child.

Dutta P, Reddy KS, Rai A, Madugundu AK, Solanki HS, Bhansali A, Radotra BD, Kumar N, Collier D, Iacovazzo D, Gupta P, Raja R, Gowda H, Pandey A, Devgun JS, Korbonits M.

J Clin Endocrinol Metab. 2019 Aug 1;104(8):3539-3544. doi: 10.1210/jc.2019-00432.

8.

Phosphoproteomic Profiling Identifies Aberrant Activation of Integrin Signaling in Aggressive Non-Type Bladder Carcinoma.

Deb B, Puttamallesh VN, Gondkar K, Thiery JP, Gowda H, Kumar P.

J Clin Med. 2019 May 17;8(5). pii: E703. doi: 10.3390/jcm8050703.

9.

Secretome analysis of oral keratinocytes chronically exposed to shisha.

Patil S, Babu N, Subbannayya T, Mohan SV, Sathe G, Solanki HS, Rajagopalan P, Patel K, Advani J, Bhandi S, Sidransky D, Chatterjee A, Gowda H, Ferrari M.

Cancer Biomark. 2019;25(1):29-41. doi: 10.3233/CBM-182099.

10.

Identification of lncRNAs associated with early-stage breast cancer and their prognostic implications.

Deva Magendhra Rao AK, Patel K, Korivi Jyothiraj S, Meenakumari B, Sundersingh S, Sridevi V, Rajkumar T, Pandey A, Chatterjee A, Gowda H, Mani S.

Mol Oncol. 2019 Jun;13(6):1342-1355. doi: 10.1002/1878-0261.12489. Epub 2019 May 8.

11.

Quantitative mass spectrometric analysis to unravel glycoproteomic signature of follicular fluid in women with polycystic ovary syndrome.

Patil K, Yelamanchi S, Kumar M, Hinduja I, Prasad TSK, Gowda H, Mukherjee S.

PLoS One. 2019 Apr 4;14(4):e0214742. doi: 10.1371/journal.pone.0214742. eCollection 2019.

12.

Whole Genome Sequencing of Mycobacterium tuberculosis Clinical Isolates From India Reveals Genetic Heterogeneity and Region-Specific Variations That Might Affect Drug Susceptibility.

Advani J, Verma R, Chatterjee O, Pachouri PK, Upadhyay P, Singh R, Yadav J, Naaz F, Ravikumar R, Buggi S, Suar M, Gupta UD, Pandey A, Chauhan DS, Tripathy SP, Gowda H, Prasad TSK.

Front Microbiol. 2019 Feb 26;10:309. doi: 10.3389/fmicb.2019.00309. eCollection 2019.

13.

Proteomic Changes in Oral Keratinocytes Chronically Exposed to Shisha (Water Pipe).

Patil S, Subbannayya T, Mohan SV, Babu N, Advani J, Sathe G, Rajagopalan P, Patel K, Bhandi S, Solanki H, Sidransky D, Gowda H, Chatterjee A, Ferrari M.

OMICS. 2019 Feb;23(2):86-97. doi: 10.1089/omi.2018.0173.

PMID:
30767727
14.

PIM1 kinase promotes gallbladder cancer cell proliferation via inhibition of proline-rich Akt substrate of 40 kDa (PRAS40).

Subbannayya T, Leal-Rojas P, Zhavoronkov A, Ozerov IV, Korzinkin M, Babu N, Radhakrishnan A, Chavan S, Raja R, Pinto SM, Patil AH, Barbhuiya MA, Kumar P, Guerrero-Preston R, Navani S, Tiwari PK, Kumar RV, Prasad TSK, Roa JC, Pandey A, Sidransky D, Gowda H, Izumchenko E, Chatterjee A.

J Cell Commun Signal. 2019 Jun;13(2):163-177. doi: 10.1007/s12079-018-00503-5. Epub 2019 Jan 21.

15.

Multiomic analysis of oral keratinocytes chronically exposed to shisha.

Patil S, Patel K, Advani J, Subbannayya T, Rajagopalan P, Babu N, Solanki H, Bhandi S, Sidransky D, Chatterjee A, Gowda H, Ferrari M.

J Oral Pathol Med. 2019 Apr;48(4):284-289. doi: 10.1111/jop.12828. Epub 2019 Feb 15.

PMID:
30659648
16.

Proteomic Analysis of the Human Anterior Pituitary Gland.

Yelamanchi SD, Tyagi A, Mohanty V, Dutta P, Korbonits M, Chavan S, Advani J, Madugundu AK, Dey G, Datta KK, Rajyalakshmi M, Sahasrabuddhe NA, Chaturvedi A, Kumar A, Das AA, Ghosh D, Jogdand GM, Nair HH, Saini K, Panchal M, Sarvaiya MA, Mohanraj SS, Sengupta N, Saxena P, Subramani PA, Kumar P, Akkali R, Reshma SV, Santhosh RS, Rastogi S, Kumar S, Ghosh SK, Irlapati VK, Srinivasan A, Radotra BD, Mathur PP, Wong GW, Satishchandra P, Chatterjee A, Gowda H, Bhansali A, Pandey A, Shankar SK, Mahadevan A, Prasad TSK.

OMICS. 2018 Dec;22(12):759-769. doi: 10.1089/omi.2018.0160.

PMID:
30571610
17.

Data from quantitative proteomic analysis of lung adenocarcinoma and squamous cell carcinoma primary tissues using high resolution mass spectrometry.

Khan AA, Mangalaparthi KK, Advani J, Prasad TSK, Gowda H, Jain D, Chatterjee A.

Data Brief. 2018 Jun 22;19:1631-1637. doi: 10.1016/j.dib.2018.06.035. eCollection 2018 Aug.

18.

Identification of potential biomarkers of head and neck squamous cell carcinoma using iTRAQ based quantitative proteomic approach.

Babu N, Mohan S, Nanjappa V, Chavan S, Advani J, Khan AA, Renuse S, Radhakrishnan A, Prasad TSK, Kumar RV, Ray JG, Biswas M, Thiyagarajan S, Califano JA, Sidransky D, Gowda H, Chatterjee A.

Data Brief. 2018 May 24;19:1124-1130. doi: 10.1016/j.dib.2018.05.100. eCollection 2018 Aug.

19.

Rise of Clinical Microbial Proteogenomics: A Multiomics Approach to Nontuberculous Mycobacterium-The Case of Mycobacterium abscessus UC22.

Advani J, Verma R, Chatterjee O, Devasahayam Arokia Balaya R, Najar MA, Ravishankara N, Suresh S, Pachori PK, Gupta UD, Pinto SM, Chauhan DS, Tripathy SP, Gowda H, Prasad TSK.

OMICS. 2019 Jan;23(1):1-16. doi: 10.1089/omi.2018.0116. Epub 2018 Sep 12.

PMID:
30207826
20.

Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India.

Advani J, Sharma K, Verma R, Chatterjee O, Solanki HS, Sharma A, Varma S, Modi M, Ray P, Sharma M, Dhillion MS, Pandey A, Gowda H, Prasad TSK.

Data Brief. 2018 Aug 24;20:617-622. doi: 10.1016/j.dib.2018.08.048. eCollection 2018 Oct.

21.

Comprehensive network map of interferon gamma signaling.

Bhat MY, Solanki HS, Advani J, Khan AA, Keshava Prasad TS, Gowda H, Thiyagarajan S, Chatterjee A.

J Cell Commun Signal. 2018 Dec;12(4):745-751. doi: 10.1007/s12079-018-0486-y. Epub 2018 Sep 6.

22.

Dissecting Candida Pathobiology: Post-Translational Modifications on the Candida tropicalis Proteome.

Patil AH, Datta KK, Behera SK, Kasaragod S, Pinto SM, Koyangana SG, Mathur PP, Gowda H, Pandey A, Prasad TSK.

OMICS. 2018 Aug;22(8):544-552. doi: 10.1089/omi.2018.0093.

PMID:
30106353
23.

A network map of thrombopoietin signaling.

Bhat FA, Advani J, Khan AA, Mohan S, Pal A, Gowda H, Chakrabarti P, Keshava Prasad TS, Chatterjee A.

J Cell Commun Signal. 2018 Dec;12(4):737-743. doi: 10.1007/s12079-018-0480-4. Epub 2018 Jul 24.

24.

Enhanced proteasomal activity is essential for long term survival and recurrence of innately radiation resistant residual glioblastoma cells.

Rajendra J, Datta KK, Ud Din Farooqee SB, Thorat R, Kumar K, Gardi N, Kaur E, Nair J, Salunkhe S, Patkar K, Desai S, Goda JS, Moiyadi A, Dutt A, Venkatraman P, Gowda H, Dutt S.

Oncotarget. 2018 Jun 12;9(45):27667-27681. doi: 10.18632/oncotarget.25351. eCollection 2018 Jun 12.

25.

Phosphoproteomics of Retinoblastoma: A Pilot Study Identifies Aberrant Kinases.

Selvan LDN, Danda R, Madugundu AK, Puttamallesh VN, Sathe GJ, Krishnan UM, Khetan V, Rishi P, Prasad TSK, Pandey A, Krishnakumar S, Gowda H, Elchuri SV.

Molecules. 2018 Jun 15;23(6). pii: E1454. doi: 10.3390/molecules23061454.

26.

Proteome-wide changes in primary skin keratinocytes exposed to diesel particulate extract-A role for antioxidants in skin health.

Rajagopalan P, Jain AP, Nanjappa V, Patel K, Mangalaparthi KK, Babu N, Cavusoglu N, Roy N, Soeur J, Breton L, Pandey A, Gowda H, Chatterjee A, Misra N.

J Dermatol Sci. 2018 Sep;91(3):239-249. doi: 10.1016/j.jdermsci.2018.05.003. Epub 2018 May 21.

27.

Transcriptional and epigenetic modulation of autophagy promotes EBV oncoprotein EBNA3C induced B-cell survival.

Bhattacharjee S, Bose P, Patel K, Roy SG, Gain C, Gowda H, Robertson ES, Saha A.

Cell Death Dis. 2018 May 22;9(6):605. doi: 10.1038/s41419-018-0668-9.

28.

Membrane Proteome of Invasive Retinoblastoma: Differential Proteins and Biomarkers.

Danda R, Ganapathy K, Sathe G, Madugundu AK, Krishnan UM, Khetan V, Rishi P, Gowda H, Pandey A, Subramanian K, Prasad TSK, Elchuri SV.

Proteomics Clin Appl. 2018 Sep;12(5):e1700101. doi: 10.1002/prca.201700101. Epub 2018 Jun 13.

PMID:
29742327
29.

Cigarette smoke and chewing tobacco alter expression of different sets of miRNAs in oral keratinocytes.

Bhat MY, Advani J, Rajagopalan P, Patel K, Nanjappa V, Solanki HS, Patil AH, Bhat FA, Mathur PP, Nair B, Prasad TSK, Califano JA, Sidransky D, Gowda H, Chatterjee A.

Sci Rep. 2018 May 4;8(1):7040. doi: 10.1038/s41598-018-25498-2.

30.

Molecular alterations associated with chronic exposure to cigarette smoke and chewing tobacco in normal oral keratinocytes.

Rajagopalan P, Patel K, Jain AP, Nanjappa V, Datta KK, Subbannayya T, Mangalaparthi KK, Kumari A, Manoharan M, Coral K, Murugan S, Nair B, Prasad TSK, Mathur PP, Gupta R, Gupta R, Khanna-Gupta A, Califano J, Sidransky D, Gowda H, Chatterjee A.

Cancer Biol Ther. 2018;19(9):773-785. doi: 10.1080/15384047.2018.1470724. Epub 2018 May 29.

31.

Identification of spleen tyrosine kinase as a potential therapeutic target for esophageal squamous cell carcinoma using reverse phase protein arrays.

Barbhuiya MA, Kashyap MK, Puttamallesh VN, Kumar RV, Wu X, Pandey A, Gowda H.

Oncotarget. 2018 Jan 1;9(26):18422-18434. doi: 10.18632/oncotarget.24853. eCollection 2018 Apr 6.

32.

Proteomic approach and expression analysis revealed the differential expression of predicted leptospiral proteases capable of ECM degradation.

Dhandapani G, Sikha T, Pinto SM, Kiran Kumar M, Patel K, Kumar M, Kumar V, Tennyson J, Satheeshkumar PK, Gowda H, Keshava Prasad TS, Madanan MG.

Biochim Biophys Acta Proteins Proteom. 2018 May - Jun;1866(5-6):712-721. doi: 10.1016/j.bbapap.2018.04.006. Epub 2018 Apr 12.

PMID:
29654978
33.

Targeting focal adhesion kinase overcomes erlotinib resistance in smoke induced lung cancer by altering phosphorylation of epidermal growth factor receptor.

Solanki HS, Raja R, Zhavoronkov A, Ozerov IV, Artemov AV, Advani J, Radhakrishnan A, Babu N, Puttamallesh VN, Syed N, Nanjappa V, Subbannayya T, Sahasrabuddhe NA, Patil AH, Prasad TSK, Gaykalova D, Chang X, Sathyendran R, Mathur PP, Rangarajan A, Sidransky D, Pandey A, Izumchenko E, Gowda H, Chatterjee A.

Oncoscience. 2018 Feb 23;5(1-2):21-38. doi: 10.18632/oncoscience.395. eCollection 2018 Jan.

34.

Role of protein kinase N2 (PKN2) in cigarette smoke-mediated oncogenic transformation of oral cells.

Rajagopalan P, Nanjappa V, Patel K, Jain AP, Mangalaparthi KK, Patil AH, Nair B, Mathur PP, Keshava Prasad TS, Califano JA, Sidransky D, Gowda H, Chatterjee A.

J Cell Commun Signal. 2018 Dec;12(4):709-721. doi: 10.1007/s12079-017-0442-2. Epub 2018 Feb 26.

35.

Depletion of keratin 8/18 modulates oncogenic potential by governing multiple signaling pathways.

Tiwari R, Sahu I, Soni BL, Sathe GJ, Thapa P, Patel P, Sinha S, Vadivel CK, Patel S, Jamghare SN, Oak S, Thorat R, Gowda H, Vaidya MM.

FEBS J. 2018 Apr;285(7):1251-1276. doi: 10.1111/febs.14401. Epub 2018 Feb 27.

36.

Question 2: Is it safe to use the centre of the heel for obtaining capillary blood samples in neonates?

Noureldein M, Gowda H.

Arch Dis Child. 2018 Apr;103(4):401-404. doi: 10.1136/archdischild-2017-314214. Epub 2018 Jan 18. No abstract available.

PMID:
29348114
37.

miRNA and Proteomic Dysregulation in Non-Small Cell Lung Cancer in Response to Cigarette Smoke.

Babu N, Advani J, Solanki HS, Patel K, Jain A, Khan AA, Radhakrishnan A, Sahasrabuddhe NA, Mathur PP, Nair B, Keshava Prasad TS, Chang X, Sidransky D, Gowda H, Chatterjee A.

Microrna. 2018;7(1):38-53. doi: 10.2174/2211536607666180103165343.

PMID:
29299995
38.

Chronic Exposure to Cigarette Smoke and Chewing Tobacco Alters Expression of microRNAs in Esophageal Epithelial Cells.

Khan AA, Advani J, Patel K, Nanjappa V, Datta KK, Solanki HS, Kumar P, Mathur PP, Nair B, Keshava Prasad TS, Chatterjee A, Gowda H.

Microrna. 2018;7(1):28-37. doi: 10.2174/2211536607666171213123907.

PMID:
29237392
39.

Bioinformatics Advances to Accelerate Omics Innovations and Applications in the Postgenomic Era.

Advani J, Subbannayya Y, Gowda H, Chatterjee A.

OMICS. 2017 Dec;21(12):750. doi: 10.1089/omi.2017.0158. Epub 2017 Nov 21. No abstract available.

PMID:
29161519
40.

"Omics" of Food-Borne Gastroenteritis: Global Proteomic and Mutagenic Analysis of Salmonella enterica Serovar Enteritidis.

Arunima A, Yelamanchi SD, Padhi C, Jaiswal S, Ryan D, Gupta B, Sathe G, Advani J, Gowda H, Prasad TSK, Suar M.

OMICS. 2017 Oct;21(10):571-583. doi: 10.1089/omi.2017.0112.

PMID:
29049011
41.

Cigarette smoke induces mitochondrial metabolic reprogramming in lung cells.

Solanki HS, Babu N, Jain AP, Bhat MY, Puttamallesh VN, Advani J, Raja R, Mangalaparthi KK, Kumar MM, Prasad TSK, Mathur PP, Sidransky D, Gowda H, Chatterjee A.

Mitochondrion. 2018 May;40:58-70. doi: 10.1016/j.mito.2017.10.002. Epub 2017 Oct 16.

PMID:
29042306
42.

Chronic Cigarette Smoke Mediated Global Changes in Lung Mucoepidermoid Cells: A Phosphoproteomic Analysis.

Solanki HS, Advani J, Khan AA, Radhakrishnan A, Sahasrabuddhe NA, Pinto SM, Chang X, Prasad TSK, Mathur PP, Sidransky D, Gowda H, Chatterjee A.

OMICS. 2017 Aug;21(8):474-487. doi: 10.1089/omi.2017.0090.

43.

Proteomic Analysis of the Human Olfactory Bulb.

Dammalli M, Dey G, Madugundu AK, Kumar M, Rodrigues B, Gowda H, Siddaiah BG, Mahadevan A, Shankar SK, Prasad TSK.

OMICS. 2017 Aug;21(8):440-453. doi: 10.1089/omi.2017.0084.

PMID:
28816642
44.

Altered signaling associated with chronic arsenic exposure in human skin keratinocytes.

Mir SA, Renuse S, Sathe G, Khan AA, Patil AH, Nanjappa V, Bhat FA, Prasad TSK, Giri AK, Chatterjee A, Gowda H.

Proteomics Clin Appl. 2017 Dec;11(11-12). doi: 10.1002/prca.201700004. Epub 2017 Aug 15.

PMID:
28731282
45.

Long-Term Cigarette Smoke Exposure and Changes in MiRNA Expression and Proteome in Non-Small-Cell Lung Cancer.

Advani J, Subbannayya Y, Patel K, Khan AA, Patil AH, Jain AP, Solanki HS, Radhakrishnan A, Pinto SM, Sahasrabuddhe NA, Thomas JK, Mathur PP, Nair BG, Chang X, Prasad TSK, Sidransky D, Gowda H, Chatterjee A.

OMICS. 2017 Jul;21(7):390-403. doi: 10.1089/omi.2017.0045.

46.

Whole Genome Sequencing of Mycobacterium tuberculosis Isolates From Extrapulmonary Sites.

Sharma K, Verma R, Advani J, Chatterjee O, Solanki HS, Sharma A, Varma S, Modi M, Ray P, Mukherjee KK, Sharma M, Dhillion MS, Suar M, Chatterjee A, Pandey A, Prasad TSK, Gowda H.

OMICS. 2017 Jul;21(7):413-425. doi: 10.1089/omi.2017.0070.

47.

PfCDPK1 mediated signaling in erythrocytic stages of Plasmodium falciparum.

Kumar S, Kumar M, Ekka R, Dvorin JD, Paul AS, Madugundu AK, Gilberger T, Gowda H, Duraisingh MT, Keshava Prasad TS, Sharma P.

Nat Commun. 2017 Jul 5;8(1):63. doi: 10.1038/s41467-017-00053-1.

48.

Corrigendum: A dual specificity kinase, DYRK1A, as a potential therapeutic target for head and neck squamous cell carcinoma.

Radhakrishnan A, Nanjappa V, Raja R, Sathe G, Puttamallesh VN, Jain AP, Pinto SM, Balaji SA, Chavan S, Sahasrabuddhe NA, Mathur PP, Kumar MM, Prasad TSK, Santosh V, Sukumar G, Califano JA, Rangarajan A, Sidransky D, Pandey A, Gowda H, Chatterjee A.

Sci Rep. 2017 Jun 26;7:46864. doi: 10.1038/srep46864.

49.

Next-Generation Sequencing Reveals Novel Mutations in X-linked Intellectual Disability.

Muthusamy B, Selvan LDN, Nguyen TT, Manoj J, Stawiski EW, Jaiswal BS, Wang W, Raja R, Ramprasad VL, Gupta R, Murugan S, Kadandale JS, Prasad TSK, Reddy K, Peterson A, Pandey A, Seshagiri S, Girimaji SC, Gowda H.

OMICS. 2017 May;21(5):295-303. doi: 10.1089/omi.2017.0009.

50.

Data-Driven Discovery of Extravasation Pathway in Circulating Tumor Cells.

Yadavalli S, Jayaram S, Manda SS, Madugundu AK, Nayakanti DS, Tan TZ, Bhat R, Rangarajan A, Chatterjee A, Gowda H, Thiery JP, Kumar P.

Sci Rep. 2017 Mar 6;7:43710. doi: 10.1038/srep43710.

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