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Items: 38

1.

Pre- and Post-analytical Factors in Biomarker Discovery.

Klont F, Horvatovich P, Govorukhina N, Bischoff R.

Methods Mol Biol. 2019;1959:1-22. doi: 10.1007/978-1-4939-9164-8_1. Review.

PMID:
30852812
2.

Targeted LC-MS/MS for the evaluation of proteomics biomarkers in the blood of neonates with necrotizing enterocolitis and late-onset sepsis.

Chatziioannou AC, Wolters JC, Sarafidis K, Thomaidou A, Agakidis C, Govorukhina N, Kuivenhoven JA, Bischoff R, Theodoridis G.

Anal Bioanal Chem. 2018 Nov;410(27):7163-7175. doi: 10.1007/s00216-018-1320-3. Epub 2018 Aug 23.

PMID:
30141021
3.

Proteomic alterations in early stage cervical cancer.

Güzel C, Govorukhina NI, Wisman GBA, Stingl C, Dekker LJM, Klip HG, Hollema H, Guryev V, Horvatovich PL, van der Zee AGJ, Bischoff R, Luider TM.

Oncotarget. 2018 Apr 6;9(26):18128-18147. doi: 10.18632/oncotarget.24773. eCollection 2018 Apr 6.

4.

Comparison of Targeted Mass Spectrometry Techniques with an Immunoassay: A Case Study for HSP90α.

Güzel C, Govorukhina NI, Stingl C, Dekker LJM, Boichenko A, van der Zee AGJ, Bischoff RPH, Luider TM.

Proteomics Clin Appl. 2018 Jan;12(1). doi: 10.1002/prca.201700107. Epub 2017 Oct 30.

PMID:
28975736
5.

Quantitative antibody-free LC-MS/MS analysis of sTRAIL in sputum and saliva at the sub-ng/mL level.

Wilffert D, Donzelli R, Asselman A, Hermans J, Govorukhina N, Ten Hacken NH, Quax WJ, van de Merbel NC, Bischoff R.

J Chromatogr B Analyt Technol Biomed Life Sci. 2016 Oct 1;1032:205-210. doi: 10.1016/j.jchromb.2016.04.041. Epub 2016 Apr 26.

PMID:
27250581
6.

Highly sensitive antibody-free μLC-MS/MS quantification of rhTRAIL in serum.

Wilffert D, Asselman A, Donzelli R, Hermans J, Govorukhina N, Quax WJ, van de Merbel NC, Bischoff R.

Bioanalysis. 2016 May;8(9):881-90. doi: 10.4155/bio.16.30. Epub 2016 Apr 13.

PMID:
27072193
7.

[A comparison analysis of the use of intravenous β-interferon-1a 30 mcg and subcutaneous β-interferon-1a 44 mcg in routine clinical practice of treatment in patients with multiple sclerosis].

Borets OG, Govorukhina NF, Zverev KV, Boiko AN.

Zh Nevrol Psikhiatr Im S S Korsakova. 2016;116(2 Pt 2):63-67. doi: 10.17116/jnevro20161162263-67. Russian.

PMID:
27070363
8.

Identification of Analytical Factors Affecting Complex Proteomics Profiles Acquired in a Factorial Design Study with Analysis of Variance: Simultaneous Component Analysis.

Mitra V, Govorukhina N, Zwanenburg G, Hoefsloot H, Westra I, Smilde A, Reijmers T, van der Zee AG, Suits F, Bischoff R, Horvatovich P.

Anal Chem. 2016 Apr 19;88(8):4229-38. doi: 10.1021/acs.analchem.5b03483. Epub 2016 Mar 28.

PMID:
26959230
9.

A panel of regulated proteins in serum from patients with cervical intraepithelial neoplasia and cervical cancer.

Boichenko AP, Govorukhina N, Klip HG, van der Zee AG, Güzel C, Luider TM, Bischoff R.

J Proteome Res. 2014 Nov 7;13(11):4995-5007. doi: 10.1021/pr500601w. Epub 2014 Sep 29.

PMID:
25232869
10.

Susceptibility to COPD: differential proteomic profiling after acute smoking.

Franciosi L, Postma DS, van den Berge M, Govorukhina N, Horvatovich PL, Fusetti F, Poolman B, Lodewijk ME, Timens W, Bischoff R, ten Hacken NH.

PLoS One. 2014 Jul 18;9(7):e102037. doi: 10.1371/journal.pone.0102037. eCollection 2014.

11.

Antibody-free LC-MS/MS quantification of rhTRAIL in human and mouse serum.

Wilffert D, Reis CR, Hermans J, Govorukhina N, Tomar T, de Jong S, Quax WJ, van de Merbel NC, Bischoff R.

Anal Chem. 2013 Nov 19;85(22):10754-60. doi: 10.1021/ac4017902. Epub 2013 Nov 1.

PMID:
24125577
12.

Multidimensional separation of tryptic peptides from human serum proteins using reversed-phase, strong cation exchange, weak anion exchange, and fused-core fluorinated stationary phases.

Boichenko AP, Govorukhina N, van der Zee AG, Bischoff R.

J Sep Sci. 2013 Nov;36(21-22):3463-70. doi: 10.1002/jssc.201300750. Epub 2013 Sep 13.

PMID:
24039020
13.

Proteomic analysis of human epithelial lining fluid by microfluidics-based nanoLC-MS/MS: a feasibility study.

Franciosi L, Govorukhina N, Fusetti F, Poolman B, Lodewijk ME, Timens W, Postma D, ten Hacken N, Bischoff R.

Electrophoresis. 2013 Sep;34(18):2683-94.

PMID:
23712570
14.

Simultaneous serum desalting and total protein determination by macroporous reversed-phase chromatography.

Boichenko A, Govorukhina N, van der Zee AG, Bischoff R.

Anal Bioanal Chem. 2013 Apr;405(10):3195-203. doi: 10.1007/s00216-013-6749-9. Epub 2013 Feb 7.

PMID:
23388688
15.

Glycopeptide enrichment and separation for protein glycosylation analysis.

Ongay S, Boichenko A, Govorukhina N, Bischoff R.

J Sep Sci. 2012 Sep;35(18):2341-72. doi: 10.1002/jssc.201200434. Review.

PMID:
22997027
16.

Proteomics of epithelial lining fluid obtained by bronchoscopic microprobe sampling.

Franciosi L, Govorukhina N, Ten Hacken N, Postma D, Bischoff R.

Methods Mol Biol. 2011;790:17-28. doi: 10.1007/978-1-61779-319-6_2.

PMID:
21948403
17.

Multidimensional chromatography coupled to mass spectrometry in analysing complex proteomics samples.

Horvatovich P, Hoekman B, Govorukhina N, Bischoff R.

J Sep Sci. 2010 Jun;33(10):1421-37. doi: 10.1002/jssc.201000050. Review.

PMID:
20486207
18.

A DNAJB chaperone subfamily with HDAC-dependent activities suppresses toxic protein aggregation.

Hageman J, Rujano MA, van Waarde MA, Kakkar V, Dirks RP, Govorukhina N, Oosterveld-Hut HM, Lubsen NH, Kampinga HH.

Mol Cell. 2010 Feb 12;37(3):355-69. doi: 10.1016/j.molcel.2010.01.001.

19.

Influence of clotting time on the protein composition of serum samples based on LC-MS data.

Govorukhina NI, de Vries M, Reijmers TH, Horvatovich P, van der Zee AG, Bischoff R.

J Chromatogr B Analyt Technol Biomed Life Sci. 2009 May 1;877(13):1281-91. doi: 10.1016/j.jchromb.2008.10.029. Epub 2008 Nov 1.

PMID:
18996063
20.

Label-free proteomics of serum.

Govorukhina N, Horvatovich P, Bischoff R.

Methods Mol Biol. 2008;484:67-77. doi: 10.1007/978-1-59745-398-1_5.

PMID:
18592173
21.

Chip-LC-MS for label-free profiling of human serum.

Horvatovich P, Govorukhina NI, Reijmers TH, van der Zee AG, Suits F, Bischoff R.

Electrophoresis. 2007 Dec;28(23):4493-505.

PMID:
18041038
22.

Multiple testing issues in discriminating compound-related peaks and chromatograms from high frequency noise, spikes and solvent-based noise in LC-MS data sets.

Nyangoma SO, van Kampen AA, Reijmers TH, Govorukhina NI, van der Zee AG, Billingham LJ, Bischoff R, Jansen RC.

Stat Appl Genet Mol Biol. 2007;6:Article23. Epub 2007 Sep 8.

PMID:
17910529
23.

Biomarker discovery by proteomics: challenges not only for the analytical chemist.

Horvatovich P, Govorukhina N, Bischoff R.

Analyst. 2006 Nov;131(11):1193-6. Epub 2006 Sep 4.

PMID:
17066185
24.

Analysis of human serum by liquid chromatography-mass spectrometry: improved sample preparation and data analysis.

Govorukhina NI, Reijmers TH, Nyangoma SO, van der Zee AG, Jansen RC, Bischoff R.

J Chromatogr A. 2006 Jul 7;1120(1-2):142-50. Epub 2006 Mar 30.

PMID:
16574134
25.

Sample preparation of human serum for the analysis of tumor markers. Comparison of different approaches for albumin and gamma-globulin depletion.

Govorukhina NI, Keizer-Gunnink A, van der Zee AG, de Jong S, de Bruijn HW, Bischoff R.

J Chromatogr A. 2003 Aug 15;1009(1-2):171-8.

PMID:
13677657
26.

Structure of membrane-bound annexin A5 trimers: a hybrid cryo-EM - X-ray crystallography study.

Oling F, Santos JS, Govorukhina N, Mazères-Dubut C, Bergsma-Schutter W, Oostergetel G, Keegstra W, Lambert O, Lewit-Bentley A, Brisson A.

J Mol Biol. 2000 Dec 8;304(4):561-73.

PMID:
11099380
27.

Surface topography of the p3 and p6 annexin V crystal forms determined by atomic force microscopy.

Reviakine I, Bergsma-Schutter W, Mazères-Dubut C, Govorukhina N, Brisson A.

J Struct Biol. 2000 Sep;131(3):234-9.

PMID:
11052896
28.
29.

Properties of an NAD(H)-containing methanol dehydrogenase and its activator protein from Bacillus methanolicus.

Arfman N, Hektor HJ, Bystrykh LV, Govorukhina NI, Dijkhuizen L, Frank J.

Eur J Biochem. 1997 Mar 1;244(2):426-33.

31.

Bacillus methanolicus sp. nov., a new species of thermotolerant, methanol-utilizing, endospore-forming bacteria.

Arfman N, Dijkhuizen L, Kirchhof G, Ludwig W, Schleifer KH, Bulygina ES, Chumakov KM, Govorukhina NI, Trotsenko YA, White D, et al.

Int J Syst Bacteriol. 1992 Jul;42(3):439-45.

PMID:
1380290
32.

Growth and enzymological characteristics of a pink-pigmented facultative methylotroph Methylobacterium sp. MB1.

Baev MV, Kuznetsov EV, Skladnev DA, Govorukhina NI, Sterkin VE, Tsygankov YD.

Folia Microbiol (Praha). 1992;37(2):93-101.

PMID:
1505877
33.

Taxonomic studies on methylotrophic bacteria by 5S ribosomal RNA sequencing.

Bulygina ES, Galchenko VF, Govorukhina NI, Netrusov AI, Nikitin DI, Trotsenko YA, Chumakov KM.

J Gen Microbiol. 1990 Mar;136(3):441-6.

PMID:
2391487
34.

3-Hexulose-6-phosphate synthase from thermotolerant methylotroph Bacillus C1.

Arfman N, Bystrykh L, Govorukhina NI, Dijkhuizen L.

Methods Enzymol. 1990;188:391-7. No abstract available.

PMID:
2280711
35.

[Classification of methylotrophic bacteria according to 5S ribosomal RNA sequencing].

Bulygina ES, Gal'chenko VF, Govorukhina NI, Netrusov AI, Nikitin DI.

Mol Gen Mikrobiol Virusol. 1989 Apr;(4):18-24. Russian.

PMID:
2473394
36.

[Analysis of DNA-DNA homologies in obligate methylotrophic bacteria].

Doronina NV, Govorukhina NI, Lysenko AM, Trotsenko IuA.

Mikrobiologiia. 1988 Jul-Aug;57(4):629-33. Russian.

PMID:
2463459
37.

[Formation of a methylotrophic denitrifying biocenosis in a system of sewage treatment for nitrates].

Vedenina IIa, Govorukhina NI.

Mikrobiologiia. 1988 Mar-Apr;57(2):320-8. Russian.

PMID:
3419370
38.

[Enzymes of ammonia assimilation in bacteria with different C1-metabolic pathways].

Loginova NV, Govorukhina NI, Trotsenko IuA.

Mikrobiologiia. 1982 Jan-Feb;51(1):38-42. Russian.

PMID:
6803111

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