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Items: 17

1.

Metaproteomic and 16S rRNA Gene Sequencing Analysis of the Infant Fecal Microbiome.

Cortes L, Wopereis H, Tartiere A, Piquenot J, Gouw JW, Tims S, Knol J, Chelsky D.

Int J Mol Sci. 2019 Mar 21;20(6). pii: E1430. doi: 10.3390/ijms20061430.

2.

Identification of peptides with tolerogenic potential in a hydrolysed whey-based infant formula.

Gouw JW, Jo J, Meulenbroek LAPM, Heijjer TS, Kremer E, Sandalova E, Knulst AC, Jeurink PV, Garssen J, Rijnierse A, Knippels LMJ.

Clin Exp Allergy. 2018 Oct;48(10):1345-1353. doi: 10.1111/cea.13223. Epub 2018 Aug 14.

PMID:
29974988
3.

A Highly Effective Component Vaccine against Nontyphoidal Salmonella enterica Infections.

Ferreira RB, Valdez Y, Coombes BK, Sad S, Gouw JW, Brown EM, Li Y, Grassl GA, Antunes LC, Gill N, Truong M, Scholz R, Reynolds LA, Krishnan L, Zafer AA, Sal-Man N, Lowden MJ, Auweter SD, Foster LJ, Finlay BB.

MBio. 2015 Sep 22;6(5):e01421-15. doi: 10.1128/mBio.01421-15.

4.

A horizontally acquired transcription factor coordinates Salmonella adaptations to host microenvironments.

Brown NF, Rogers LD, Sanderson KL, Gouw JW, Hartland EL, Foster LJ.

MBio. 2014 Sep 23;5(5):e01727-14. doi: 10.1128/mBio.01727-14.

5.

MSQuant: a platform for stable isotope-based quantitative proteomics.

Gouw JW, Krijgsveld J.

Methods Mol Biol. 2012;893:511-22. doi: 10.1007/978-1-61779-885-6_31.

PMID:
22665320
6.

Connexin multi-site phosphorylation: mass spectrometry-based proteomics fills the gap.

Chen VC, Gouw JW, Naus CC, Foster LJ.

Biochim Biophys Acta. 2013 Jan;1828(1):23-34. doi: 10.1016/j.bbamem.2012.02.028. Epub 2012 Mar 6. Review.

7.

Alternative reading frame selection mediated by a tRNA-like domain of an internal ribosome entry site.

Ren Q, Wang QS, Firth AE, Chan MM, Gouw JW, Guarna MM, Foster LJ, Atkins JF, Jan E.

Proc Natl Acad Sci U S A. 2012 Mar 13;109(11):E630-9. doi: 10.1073/pnas.1111303109. Epub 2012 Jan 13.

8.

Metabolic labeling of model organisms using heavy nitrogen (15N).

Gouw JW, Tops BB, Krijgsveld J.

Methods Mol Biol. 2011;753:29-42. doi: 10.1007/978-1-61779-148-2_2.

PMID:
21604113
9.

Quantitative proteomics by metabolic labeling of model organisms.

Gouw JW, Krijgsveld J, Heck AJ.

Mol Cell Proteomics. 2010 Jan;9(1):11-24. doi: 10.1074/mcp.R900001-MCP200. Epub 2009 Nov 19.

10.

MSQuant, an open source platform for mass spectrometry-based quantitative proteomics.

Mortensen P, Gouw JW, Olsen JV, Ong SE, Rigbolt KT, Bunkenborg J, Cox J, Foster LJ, Heck AJ, Blagoev B, Andersen JS, Mann M.

J Proteome Res. 2010 Jan;9(1):393-403. doi: 10.1021/pr900721e.

PMID:
19888749
11.

In vivo stable isotope labeling of fruit flies reveals post-transcriptional regulation in the maternal-to-zygotic transition.

Gouw JW, Pinkse MW, Vos HR, Moshkin Y, Verrijzer CP, Heck AJ, Krijgsveld J.

Mol Cell Proteomics. 2009 Jul;8(7):1566-78. doi: 10.1074/mcp.M900114-MCP200. Epub 2009 Mar 24.

12.

Straightforward and de novo peptide sequencing by MALDI-MS/MS using a Lys-N metalloendopeptidase.

Boersema PJ, Taouatas N, Altelaar AF, Gouw JW, Ross PL, Pappin DJ, Heck AJ, Mohammed S.

Mol Cell Proteomics. 2009 Apr;8(4):650-60. doi: 10.1074/mcp.M800249-MCP200. Epub 2008 Nov 29.

13.

Optimizing identification and quantitation of 15N-labeled proteins in comparative proteomics.

Gouw JW, Tops BB, Mortensen P, Heck AJ, Krijgsveld J.

Anal Chem. 2008 Oct 15;80(20):7796-803. doi: 10.1021/ac801249v. Epub 2008 Sep 23.

PMID:
18808151
14.

Monitoring of changes in the membrane proteome during stationary phase adaptation of Bacillus subtilis using in vivo labeling techniques.

Dreisbach A, Otto A, Becher D, Hammer E, Teumer A, Gouw JW, Hecker M, Völker U.

Proteomics. 2008 May;8(10):2062-76. doi: 10.1002/pmic.200701081.

PMID:
18491319
15.

Highly robust, automated, and sensitive online TiO2-based phosphoproteomics applied to study endogenous phosphorylation in Drosophila melanogaster.

Pinkse MW, Mohammed S, Gouw JW, van Breukelen B, Vos HR, Heck AJ.

J Proteome Res. 2008 Feb;7(2):687-97. Epub 2007 Nov 23.

PMID:
18034456
17.

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