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Items: 12


Exploring effective approaches for haplotype block phasing.

Al Bkhetan Z, Zobel J, Kowalczyk A, Verspoor K, Goudey B.

BMC Bioinformatics. 2019 Oct 30;20(1):540. doi: 10.1186/s12859-019-3095-8.


Cirrus: An Automated Mammography-Based Measure of Breast Cancer Risk Based on Textural Features.

Schmidt DF, Makalic E, Goudey B, Dite GS, Stone J, Nguyen TL, Dowty JG, Baglietto L, Southey MC, Maskarinec G, Giles GG, Hopper JL.

JNCI Cancer Spectr. 2018 Dec 7;2(4):pky057. doi: 10.1093/jncics/pky057. eCollection 2018 Oct.


A blood-based signature of cerebrospinal fluid Aβ1-42 status.

Goudey B, Fung BJ, Schieber C, Faux NG; Alzheimer’s Disease Metabolomics Consortium; Alzheimer’s Disease Neuroimaging Initiative.

Sci Rep. 2019 Mar 11;9(1):4163. doi: 10.1038/s41598-018-37149-7.


A hybrid approach for automated mutation annotation of the extended human mutation landscape in scientific literature.

Yepes AJ, MacKinlay A, Gunn N, Schieber C, Faux N, Downton M, Goudey B, Martin RL.

AMIA Annu Symp Proc. 2018 Dec 5;2018:616-623. eCollection 2018.


Cross-ethnicity tagging SNPs for HLA alleles associated with adverse drug reaction.

Erlichster M, Goudey B, Skafidas E, Kwan P.

Pharmacogenomics J. 2019 Jun;19(3):230-239. doi: 10.1038/s41397-018-0039-z. Epub 2018 Aug 10.


Interactions within the MHC contribute to the genetic architecture of celiac disease.

Goudey B, Abraham G, Kikianty E, Wang Q, Rawlinson D, Shi F, Haviv I, Stern L, Kowalczyk A, Inouye M.

PLoS One. 2017 Mar 10;12(3):e0172826. doi: 10.1371/journal.pone.0172826. eCollection 2017.


Use of a Novel Nonparametric Version of DEPTH to Identify Genomic Regions Associated with Prostate Cancer Risk.

MacInnis RJ, Schmidt DF, Makalic E, Severi G, FitzGerald LM, Reumann M, Kapuscinski MK, Kowalczyk A, Zhou Z, Goudey B, Qian G, Bui QM, Park DJ, Freeman A, Southey MC, Al Olama AA, Kote-Jarai Z, Eeles RA, Hopper JL, Giles GG; UK Genetic Prostate Cancer Study Collaborators.

Cancer Epidemiol Biomarkers Prev. 2016 Dec;25(12):1619-1624. Epub 2016 Aug 18.


High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies.

Goudey B, Abedini M, Hopper JL, Inouye M, Makalic E, Schmidt DF, Wagner J, Zhou Z, Zobel J, Reumann M.

Health Inf Sci Syst. 2015 Feb 24;3(Suppl 1 HISA Big Data in Biomedicine and Healthcare 2013 Con):S3. doi: 10.1186/2047-2501-3-S1-S3. eCollection 2015.


Stability of bivariate GWAS biomarker detection.

Bedő J, Rawlinson D, Goudey B, Ong CS.

PLoS One. 2014 Apr 30;9(4):e93319. doi: 10.1371/journal.pone.0093319. eCollection 2014.


GWIS--model-free, fast and exhaustive search for epistatic interactions in case-control GWAS.

Goudey B, Rawlinson D, Wang Q, Shi F, Ferra H, Campbell RM, Stern L, Inouye MT, Ong CS, Kowalczyk A.

BMC Genomics. 2013;14 Suppl 3:S10. doi: 10.1186/1471-2164-14-S3-S10. Epub 2013 May 28.


Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results.

Reumann M, Makalic E, Goudey BW, Inouye M, Bickerstaffe A, Bui M, Park DJ, Kapuscinski MK, Schmidt DF, Zhou Z, Qian G, Zobel J, Wagner J, Hopper JL.

Conf Proc IEEE Eng Med Biol Soc. 2012;2012:1258-61. doi: 10.1109/EMBC.2012.6346166.


Plasma lipidomic analysis of stable and unstable coronary artery disease.

Meikle PJ, Wong G, Tsorotes D, Barlow CK, Weir JM, Christopher MJ, MacIntosh GL, Goudey B, Stern L, Kowalczyk A, Haviv I, White AJ, Dart AM, Duffy SJ, Jennings GL, Kingwell BA.

Arterioscler Thromb Vasc Biol. 2011 Nov;31(11):2723-32. doi: 10.1161/ATVBAHA.111.234096.


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