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Items: 22

1.

Enabling precision medicine via standard communication of HTS provenance, analysis, and results.

Alterovitz G, Dean D, Goble C, Crusoe MR, Soiland-Reyes S, Bell A, Hayes A, Suresh A, Purkayastha A, King CH, Taylor D, Johanson E, Thompson EE, Donaldson E, Morizono H, Tsang H, Vora JK, Goecks J, Yao J, Almeida JS, Keeney J, Addepalli K, Krampis K, Smith KM, Guo L, Walderhaug M, Schito M, Ezewudo M, Guimera N, Walsh P, Kahsay R, Gottipati S, Rodwell TC, Bloom T, Lai Y, Simonyan V, Mazumder R.

PLoS Biol. 2018 Dec 31;16(12):e3000099. doi: 10.1371/journal.pbio.3000099. eCollection 2018 Dec.

2.

Text analytics approach to extract course improvement suggestions from students' feedback.

Gottipati S, Shankararaman V, Lin JR.

Res Pract Technol Enhanc Learn. 2018;13(1):6. doi: 10.1186/s41039-018-0073-0. Epub 2018 Jun 4.

3.

Survey of Global Genetic Diversity Within the Drosophila Immune System.

Early AM, Arguello JR, Cardoso-Moreira M, Gottipati S, Grenier JK, Clark AG.

Genetics. 2017 Jan;205(1):353-366. doi: 10.1534/genetics.116.195016. Epub 2016 Nov 4.

4.

Extensive local adaptation within the chemosensory system following Drosophila melanogaster's global expansion.

Arguello JR, Cardoso-Moreira M, Grenier JK, Gottipati S, Clark AG, Benton R.

Nat Commun. 2016 Jun 13;7:ncomms11855. doi: 10.1038/ncomms11855.

5.

Evidence for the fixation of gene duplications by positive selection in Drosophila.

Cardoso-Moreira M, Arguello JR, Gottipati S, Harshman LG, Grenier JK, Clark AG.

Genome Res. 2016 Jun;26(6):787-98. doi: 10.1101/gr.199323.115. Epub 2016 Apr 12.

6.

Global diversity lines - a five-continent reference panel of sequenced Drosophila melanogaster strains.

Grenier JK, Arguello JR, Moreira MC, Gottipati S, Mohammed J, Hackett SR, Boughton R, Greenberg AJ, Clark AG.

G3 (Bethesda). 2015 Feb 11;5(4):593-603. doi: 10.1534/g3.114.015883.

7.

Sarcoidosis in native and transplanted kidneys: incidence, pathologic findings, and clinical course.

Bagnasco SM, Gottipati S, Kraus E, Alachkar N, Montgomery RA, Racusen LC, Arend LJ.

PLoS One. 2014 Oct 20;9(10):e110778. doi: 10.1371/journal.pone.0110778. eCollection 2014.

8.

Using Mendelian inheritance to improve high-throughput SNP discovery.

Chen N, Van Hout CV, Gottipati S, Clark AG.

Genetics. 2014 Nov;198(3):847-57. doi: 10.1534/genetics.114.169052. Epub 2014 Sep 5.

9.

Contrasting X-linked and autosomal diversity across 14 human populations.

Arbiza L, Gottipati S, Siepel A, Keinan A.

Am J Hum Genet. 2014 Jun 5;94(6):827-44. doi: 10.1016/j.ajhg.2014.04.011. Epub 2014 May 15.

10.

Utility of birefringent crystal identification by polarized light microscopy in distinguishing thyroid from parathyroid tissue on intraoperative frozen sections.

Wong KS, Lewis JS Jr, Gottipati S, Chernock RD.

Am J Surg Pathol. 2014 Sep;38(9):1212-9. doi: 10.1097/PAS.0000000000000204.

PMID:
24618617
11.

PI3Kγ kinase activity is required for optimal T-cell activation and differentiation.

Ladygina N, Gottipati S, Ngo K, Castro G, Ma JY, Banie H, Rao TS, Fung-Leung WP.

Eur J Immunol. 2013 Dec;43(12):3183-96. doi: 10.1002/eji.201343812. Epub 2013 Oct 9.

12.

Usual and unusual histologic patterns of high Gleason score 8 to 10 adenocarcinoma of the prostate in needle biopsy tissue.

Gottipati S, Warncke J, Vollmer R, Humphrey PA.

Am J Surg Pathol. 2012 Jun;36(6):900-7. doi: 10.1097/PAS.0b013e3182495dee.

PMID:
22367295
13.

Analyses of X-linked and autosomal genetic variation in population-scale whole genome sequencing.

Gottipati S, Arbiza L, Siepel A, Clark AG, Keinan A.

Nat Genet. 2011 Jul 24;43(8):741-3. doi: 10.1038/ng.877.

14.
15.

IRAK1: a critical signaling mediator of innate immunity.

Gottipati S, Rao NL, Fung-Leung WP.

Cell Signal. 2008 Feb;20(2):269-76. Epub 2007 Aug 23. Review.

PMID:
17890055
16.

Notch1 augments NF-kappaB activity by facilitating its nuclear retention.

Shin HM, Minter LM, Cho OH, Gottipati S, Fauq AH, Golde TE, Sonenshein GE, Osborne BA.

EMBO J. 2006 Jan 11;25(1):129-38. Epub 2005 Dec 1.

17.

Differential expression and comparative subcellular localization of estrogen receptor beta isoforms in virally transformed and normal cultured human lens epithelial cells.

Cammarata PR, Flynn J, Gottipati S, Chu S, Dimitrijevich S, Younes M, Skliris G, Murphy LC.

Exp Eye Res. 2005 Aug;81(2):165-75.

PMID:
16080910
19.

Inhibitors of gamma-secretase block in vivo and in vitro T helper type 1 polarization by preventing Notch upregulation of Tbx21.

Minter LM, Turley DM, Das P, Shin HM, Joshi I, Lawlor RG, Cho OH, Palaga T, Gottipati S, Telfer JC, Kostura L, Fauq AH, Simpson K, Such KA, Miele L, Golde TE, Miller SD, Osborne BA.

Nat Immunol. 2005 Jul;6(7):680-8.

PMID:
15991363
20.

A putative mitochondrial mechanism for antioxidative cytoprotection by 17beta-estradiol.

Moor AN, Gottipati S, Mallet RT, Sun J, Giblin FJ, Roque R, Cammarata PR.

Exp Eye Res. 2004 May;78(5):933-44.

PMID:
15051475
21.

Activation of Notch-1 signaling maintains the neoplastic phenotype in human Ras-transformed cells.

Weijzen S, Rizzo P, Braid M, Vaishnav R, Jonkheer SM, Zlobin A, Osborne BA, Gottipati S, Aster JC, Hahn WC, Rudolf M, Siziopikou K, Kast WM, Miele L.

Nat Med. 2002 Sep;8(9):979-86. Epub 2002 Aug 19.

PMID:
12185362
22.

Notch-1 regulates NF-kappaB activity in hemopoietic progenitor cells.

Cheng P, Zlobin A, Volgina V, Gottipati S, Osborne B, Simel EJ, Miele L, Gabrilovich DI.

J Immunol. 2001 Oct 15;167(8):4458-67.

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