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Items: 1 to 50 of 88

1.

Optimization of phosphate recovery from monkfish, Lophius vomerinus, processing by-products and characterization of the phosphate phases.

Swart J, Bordoloi A, Goosen NJ.

J Sci Food Agric. 2019 Apr;99(6):2743-2756. doi: 10.1002/jsfa.9450. Epub 2019 Jan 17.

PMID:
30362119
2.

Solvent Extraction of Polyphenolics from the Indigenous African Fruit Ximenia caffra and Characterization by LC-HRMS.

Oosthuizen D, Goosen NJ, Stander MA, Ibrahim AD, Pedavoah MM, Usman GO, Aderinola T.

Antioxidants (Basel). 2018 Aug 1;7(8). pii: E103. doi: 10.3390/antiox7080103.

3.

Nicotiana benthamiana α-galactosidase A1.1 can functionally complement human α-galactosidase A deficiency associated with Fabry disease.

Kytidou K, Beekwilder J, Artola M, van Meel E, Wilbers RHP, Moolenaar GF, Goosen N, Ferraz MJ, Katzy R, Voskamp P, Florea BI, Hokke CH, Overkleeft HS, Schots A, Bosch D, Pannu N, Aerts JMFG.

J Biol Chem. 2018 Jun 29;293(26):10042-10058. doi: 10.1074/jbc.RA118.001774. Epub 2018 Apr 19.

4.

Large-scale in vitro production, refolding and dimerization of PsbS in different microenvironments.

Krishnan M, Moolenaar GF, Gupta KBSS, Goosen N, Pandit A.

Sci Rep. 2017 Nov 9;7(1):15200. doi: 10.1038/s41598-017-15068-3.

5.

Mechanism of environmentally driven conformational changes that modulate H-NS DNA-bridging activity.

van der Valk RA, Vreede J, Qin L, Moolenaar GF, Hofmann A, Goosen N, Dame RT.

Elife. 2017 Sep 26;6. pii: e27369. doi: 10.7554/eLife.27369.

6.

Human Alpha Galactosidases Transiently Produced in Nicotiana benthamiana Leaves: New Insights in Substrate Specificities with Relevance for Fabry Disease.

Kytidou K, Beenakker TJM, Westerhof LB, Hokke CH, Moolenaar GF, Goosen N, Mirzaian M, Ferraz MJ, de Geus M, Kallemeijn WW, Overkleeft HS, Boot RG, Schots A, Bosch D, Aerts JMFG.

Front Plant Sci. 2017 Jun 21;8:1026. doi: 10.3389/fpls.2017.01026. eCollection 2017.

7.

OsdR of Streptomyces coelicolor and the Dormancy Regulator DevR of Mycobacterium tuberculosis Control Overlapping Regulons.

Urem M, van Rossum T, Bucca G, Moolenaar GF, Laing E, Świątek-Połatyńska MA, Willemse J, Tenconi E, Rigali S, Goosen N, Smith CP, van Wezel GP.

mSystems. 2016 May 3;1(3). pii: e00014-16. eCollection 2016 May-Jun.

8.

Diverse architectural properties of Sso10a proteins: Evidence for a role in chromatin compaction and organization.

Driessen RP, Lin SN, Waterreus WJ, van der Meulen AL, van der Valk RA, Laurens N, Moolenaar GF, Pannu NS, Wuite GJ, Goosen N, Dame RT.

Sci Rep. 2016 Jul 11;6:29422. doi: 10.1038/srep29422.

9.

Effect of temperature on the intrinsic flexibility of DNA and its interaction with architectural proteins.

Driessen RP, Sitters G, Laurens N, Moolenaar GF, Wuite GJ, Goosen N, Dame RT.

Biochemistry. 2014 Oct 21;53(41):6430-8. doi: 10.1021/bi500344j. Epub 2014 Oct 7.

10.

UV damage endonuclease employs a novel dual-dinucleotide flipping mechanism to recognize different DNA lesions.

Meulenbroek EM, Peron Cane C, Jala I, Iwai S, Moolenaar GF, Goosen N, Pannu NS.

Nucleic Acids Res. 2013 Jan;41(2):1363-71. doi: 10.1093/nar/gks1127. Epub 2012 Dec 4.

11.

Role of the insertion domain and the zinc-finger motif of Escherichia coli UvrA in damage recognition and ATP hydrolysis.

Wagner K, Moolenaar GF, Goosen N.

DNA Repair (Amst). 2011 May 5;10(5):483-96. doi: 10.1016/j.dnarep.2011.02.002. Epub 2011 Mar 9.

PMID:
21393072
12.

Role of the two ATPase domains of Escherichia coli UvrA in binding non-bulky DNA lesions and interaction with UvrB.

Wagner K, Moolenaar GF, Goosen N.

DNA Repair (Amst). 2010 Nov 10;9(11):1176-86. doi: 10.1016/j.dnarep.2010.08.008. Epub 2010 Sep 22.

PMID:
20864419
13.

Scanning the DNA for damage by the nucleotide excision repair machinery.

Goosen N.

DNA Repair (Amst). 2010 May 4;9(5):593-6. doi: 10.1016/j.dnarep.2010.02.015. Epub 2010 Mar 23. Review.

PMID:
20335079
14.

Involvement of a carboxylated lysine in UV damage endonuclease.

Meulenbroek EM, Paspaleva K, Thomassen EA, Abrahams JP, Goosen N, Pannu NS.

Protein Sci. 2009 Mar;18(3):549-58. doi: 10.1002/pro.54.

15.

Single-molecule analysis reveals two separate DNA-binding domains in the Escherichia coli UvrA dimer.

Wagner K, Moolenaar G, van Noort J, Goosen N.

Nucleic Acids Res. 2009 Apr;37(6):1962-72. doi: 10.1093/nar/gkp071. Epub 2009 Feb 10.

16.

Stimulation of UvrD helicase by UvrAB.

Atkinson J, Guy CP, Cadman CJ, Moolenaar GF, Goosen N, McGlynn P.

J Biol Chem. 2009 Apr 3;284(14):9612-23. doi: 10.1074/jbc.M808030200. Epub 2009 Feb 10.

17.

Damage recognition by UV damage endonuclease from Schizosaccharomyces pombe.

Paspaleva K, Moolenaar GF, Goosen N.

DNA Repair (Amst). 2009 May 1;8(5):600-11. doi: 10.1016/j.dnarep.2008.12.004. Epub 2009 Jan 17.

PMID:
19152795
18.

Functions of base flipping in E. coli nucleotide excision repair.

Malta E, Verhagen CP, Moolenaar GF, Filippov DV, van der Marel GA, Goosen N.

DNA Repair (Amst). 2008 Oct 1;7(10):1647-58. doi: 10.1016/j.dnarep.2008.06.011. Epub 2008 Jul 26.

PMID:
18638572
19.

Crystal structure of Bacillus stearothermophilus UvrA provides insight into ATP-modulated dimerization, UvrB interaction, and DNA binding.

Pakotiprapha D, Inuzuka Y, Bowman BR, Moolenaar GF, Goosen N, Jeruzalmi D, Verdine GL.

Mol Cell. 2008 Jan 18;29(1):122-33. Epub 2007 Dec 27.

20.

Repair of UV damage in bacteria.

Goosen N, Moolenaar GF.

DNA Repair (Amst). 2008 Mar 1;7(3):353-79. Epub 2007 Oct 24. Review.

PMID:
17951115
21.

Crystal structure of the DNA repair enzyme ultraviolet damage endonuclease.

Paspaleva K, Thomassen E, Pannu NS, Iwai S, Moolenaar GF, Goosen N, Abrahams JP.

Structure. 2007 Oct;15(10):1316-24.

22.

Dynamics of the UvrABC nucleotide excision repair proteins analyzed by fluorescence resonance energy transfer.

Malta E, Moolenaar GF, Goosen N.

Biochemistry. 2007 Aug 7;46(31):9080-8. Epub 2007 Jul 14.

PMID:
17630776
23.

Functional characterization of the competence protein DprA/Smf in Escherichia coli.

Smeets LC, Becker SC, Barcak GJ, Vandenbroucke-Grauls CM, Bitter W, Goosen N.

FEMS Microbiol Lett. 2006 Oct;263(2):223-8.

24.

Base flipping in nucleotide excision repair.

Malta E, Moolenaar GF, Goosen N.

J Biol Chem. 2006 Jan 27;281(4):2184-94. Epub 2005 Nov 9.

25.

Binding of the UvrB dimer to non-damaged and damaged DNA: residues Y92 and Y93 influence the stability of both subunits.

Moolenaar GF, Schut M, Goosen N.

DNA Repair (Amst). 2005 Jun 8;4(6):699-713. Epub 2005 Apr 15.

PMID:
15886069
26.

Dual architectural roles of HU: formation of flexible hinges and rigid filaments.

van Noort J, Verbrugge S, Goosen N, Dekker C, Dame RT.

Proc Natl Acad Sci U S A. 2004 May 4;101(18):6969-74. Epub 2004 Apr 26.

27.

Insights into the regulation of transcription by scanning force microscopy.

Dame RT, Wyman C, Goosen N.

J Microsc. 2003 Dec;212(Pt 3):244-53. Review. Erratum in: J Microsc. 2004 Feb;213(Pt 2):212.

28.

HU: promoting or counteracting DNA compaction?

Dame RT, Goosen N.

FEBS Lett. 2002 Oct 9;529(2-3):151-6. Review.

29.

The presence of two UvrB subunits in the UvrAB complex ensures damage detection in both DNA strands.

Verhoeven EE, Wyman C, Moolenaar GF, Goosen N.

EMBO J. 2002 Aug 1;21(15):4196-205.

30.

The C-terminal region of Escherichia coli UvrC contributes to the flexibility of the UvrABC nucleotide excision repair system.

Verhoeven EE, van Kesteren M, Turner JJ, van der Marel GA, van Boom JH, Moolenaar GF, Goosen N.

Nucleic Acids Res. 2002 Jun 1;30(11):2492-500.

31.

Cho, a second endonuclease involved in Escherichia coli nucleotide excision repair.

Moolenaar GF, van Rossum-Fikkert S, van Kesteren M, Goosen N.

Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1467-72. Epub 2002 Jan 29.

32.

Structural basis for H-NS-mediated trapping of RNA polymerase in the open initiation complex at the rrnB P1.

Dame RT, Wyman C, Wurm R, Wagner R, Goosen N.

J Biol Chem. 2002 Jan 18;277(3):2146-50. Epub 2001 Nov 19.

33.

Solution structure, hydrodynamics and thermodynamics of the UvrB C-terminal domain.

Alexandrovich A, Czisch M, Frenkiel TA, Kelly GP, Goosen N, Moolenaar GF, Chowdhry BZ, Sanderson MR, Lane AN.

J Biomol Struct Dyn. 2001 Oct;19(2):219-36.

PMID:
11697728
34.
35.

Role of ATP hydrolysis by UvrA and UvrB during nucleotide excision repair.

Goosen N, Moolenaar GF.

Res Microbiol. 2001 Apr-May;152(3-4):401-9. Review.

PMID:
11421287
36.

Structural basis for preferential binding of H-NS to curved DNA.

Dame RT, Wyman C, Goosen N.

Biochimie. 2001 Feb;83(2):231-4.

PMID:
11278073
37.

Architecture of nucleotide excision repair complexes: DNA is wrapped by UvrB before and after damage recognition.

Verhoeven EE, Wyman C, Moolenaar GF, Hoeijmakers JH, Goosen N.

EMBO J. 2001 Feb 1;20(3):601-11.

38.

Role of the Escherichia coli nucleotide excision repair proteins in DNA replication.

Moolenaar GF, Moorman C, Goosen N.

J Bacteriol. 2000 Oct;182(20):5706-14.

39.

H-NS mediated compaction of DNA visualised by atomic force microscopy.

Dame RT, Wyman C, Goosen N.

Nucleic Acids Res. 2000 Sep 15;28(18):3504-10.

40.

The role of ATP binding and hydrolysis by UvrB during nucleotide excision repair.

Moolenaar GF, Herron MF, Monaco V, van der Marel GA, van Boom JH, Visse R, Goosen N.

J Biol Chem. 2000 Mar 17;275(11):8044-50.

41.

The effect of the DNA flanking the lesion on formation of the UvrB-DNA preincision complex. Mechanism for the UvrA-mediated loading of UvrB onto a DNA damaged site.

Moolenaar GF, Monaco V, van der Marel GA, van Boom JH, Visse R, Goosen N.

J Biol Chem. 2000 Mar 17;275(11):8038-43.

42.

Catalytic sites for 3' and 5' incision of Escherichia coli nucleotide excision repair are both located in UvrC.

Verhoeven EE, van Kesteren M, Moolenaar GF, Visse R, Goosen N.

J Biol Chem. 2000 Feb 18;275(7):5120-3.

43.

Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-uvrC interaction.

Sohi M, Alexandrovich A, Moolenaar G, Visse R, Goosen N, Vernede X, Fontecilla-Camps JC, Champness J, Sanderson MR.

FEBS Lett. 2000 Jan 14;465(2-3):161-4.

44.

Synthesis and biological evaluation of modified DNA fragments for the study of nucleotide excision repair in E. coli.

Monaco V, van de Wetering KI, Meeuwenoord NJ, van den Elst HA, Stuivenberg HR, Visse R, van der Kaaden JC, Moolenaar GF, Verhoeven EE, Goosen N, van der Marel GA, van Boom JH.

Nucleosides Nucleotides. 1999 Jun-Jul;18(6-7):1339-41.

PMID:
10474222
45.

NMR assignments and secondary structure of the UvrC binding domain of UvrB.

Alexandrovich A, Sanderson MR, Moolenaar GF, Goosen N, Lane AN.

FEBS Lett. 1999 May 21;451(2):181-5.

46.

Characterization of the Escherichia coli damage-independent UvrBC endonuclease activity.

Moolenaar GF, Bazuine M, van Knippenberg IC, Visse R, Goosen N.

J Biol Chem. 1998 Dec 25;273(52):34896-903.

47.
49.

The integration host factor-DNA complex upstream of the early promoter of bacteriophage Mu is functionally symmetric.

van Ulsen P, Hillebrand M, Zulianello L, van de Putte P, Goosen N.

J Bacteriol. 1997 May;179(9):3073-5.

50.

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