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Interactions between the Gut Microbiome and Mucosal Immunoglobulins A, M, and G in the Developing Infant Gut.

Janzon A, Goodrich JK, Koren O; TEDDY Study Group, Waters JL, Ley RE.

mSystems. 2019 Nov 26;4(6). pii: e00612-19. doi: 10.1128/mSystems.00612-19.


MSTO1 mutations cause mtDNA depletion, manifesting as muscular dystrophy with cerebellar involvement.

Donkervoort S, Sabouny R, Yun P, Gauquelin L, Chao KR, Hu Y, Al Khatib I, Töpf A, Mohassel P, Cummings BB, Kaur R, Saade D, Moore SA, Waddell LB, Farrar MA, Goodrich JK, Uapinyoying P, Chan SHS, Javed A, Leach ME, Karachunski P, Dalton J, Medne L, Harper A, Thompson C, Thiffault I, Specht S, Lamont RE, Saunders C, Racher H, Bernier FP, Mowat D, Witting N, Vissing J, Hanson R, Coffman KA, Hainlen M, Parboosingh JS, Carnevale A, Yoon G, Schnur RE; Care4Rare Canada Consortium, Boycott KM, Mah JK, Straub V, Foley AR, Innes AM, Bönnemann CG, Shutt TE.

Acta Neuropathol. 2019 Dec;138(6):1013-1031. doi: 10.1007/s00401-019-02059-z. Epub 2019 Aug 29.


Human Salivary Amylase Gene Copy Number Impacts Oral and Gut Microbiomes.

Poole AC, Goodrich JK, Youngblut ND, Luque GG, Ruaud A, Sutter JL, Waters JL, Shi Q, El-Hadidi M, Johnson LM, Bar HY, Huson DH, Booth JG, Ley RE.

Cell Host Microbe. 2019 Apr 10;25(4):553-564.e7. doi: 10.1016/j.chom.2019.03.001.


Virome Diversity Correlates with Intestinal Microbiome Diversity in Adult Monozygotic Twins.

Moreno-Gallego JL, Chou SP, Di Rienzi SC, Goodrich JK, Spector TD, Bell JT, Youngblut ND, Hewson I, Reyes A, Ley RE.

Cell Host Microbe. 2019 Feb 13;25(2):261-272.e5. doi: 10.1016/j.chom.2019.01.019.


The Relationship Between the Human Genome and Microbiome Comes into View.

Goodrich JK, Davenport ER, Clark AG, Ley RE.

Annu Rev Genet. 2017 Nov 27;51:413-433. doi: 10.1146/annurev-genet-110711-155532. Epub 2017 Sep 20. Review.


ABO antigen and secretor statuses are not associated with gut microbiota composition in 1,500 twins.

Davenport ER, Goodrich JK, Bell JT, Spector TD, Ley RE, Clark AG.

BMC Genomics. 2016 Nov 21;17(1):941.


Reply to "Triclocarban and Health: the Jury Is Still Out".

Pischel L, Poole AC, Ley C, Suh G, Goodrich JK, Haggerty TD, Ley RE, Parsonnet J.

mSphere. 2016 Nov 2;1(6). pii: e00255-16. eCollection 2016 Nov-Dec. No abstract available.


Heritable components of the human fecal microbiome are associated with visceral fat.

Beaumont M, Goodrich JK, Jackson MA, Yet I, Davenport ER, Vieira-Silva S, Debelius J, Pallister T, Mangino M, Raes J, Knight R, Clark AG, Ley RE, Spector TD, Bell JT.

Genome Biol. 2016 Sep 26;17(1):189.


Reduced diversity and altered composition of the gut microbiome in individuals with myalgic encephalomyelitis/chronic fatigue syndrome.

Giloteaux L, Goodrich JK, Walters WA, Levine SM, Ley RE, Hanson MR.

Microbiome. 2016 Jun 23;4(1):30. doi: 10.1186/s40168-016-0171-4.


Crossover Control Study of the Effect of Personal Care Products Containing Triclosan on the Microbiome.

Poole AC, Pischel L, Ley C, Suh G, Goodrich JK, Haggerty TD, Ley RE, Parsonnet J.

mSphere. 2016 May 18;1(3). pii: e00056-15. doi: 10.1128/mSphere.00056-15. eCollection 2016 May-Jun.


Genetic Determinants of the Gut Microbiome in UK Twins.

Goodrich JK, Davenport ER, Beaumont M, Jackson MA, Knight R, Ober C, Spector TD, Bell JT, Clark AG, Ley RE.

Cell Host Microbe. 2016 May 11;19(5):731-43. doi: 10.1016/j.chom.2016.04.017.


Corrigendum: Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome.

Chassaing B, Koren O, Goodrich JK, Poole AC, Srinivasan S, Ley RE, Gewirtz AT.

Nature. 2016 Aug 11;536(7615):238. doi: 10.1038/nature18000. Epub 2016 May 4. No abstract available.


Cross-species comparisons of host genetic associations with the microbiome.

Goodrich JK, Davenport ER, Waters JL, Clark AG, Ley RE.

Science. 2016 Apr 29;352(6285):532-5. doi: 10.1126/science.aad9379. Review.


Proton pump inhibitors alter the composition of the gut microbiota.

Jackson MA, Goodrich JK, Maxan ME, Freedberg DE, Abrams JA, Poole AC, Sutter JL, Welter D, Ley RE, Bell JT, Spector TD, Steves CJ.

Gut. 2016 May;65(5):749-56. doi: 10.1136/gutjnl-2015-310861. Epub 2015 Dec 30.


Epithelial Sel1L is required for the maintenance of intestinal homeostasis.

Sun S, Lourie R, Cohen SB, Ji Y, Goodrich JK, Poole AC, Ley RE, Denkers EY, McGuckin MA, Long Q, Duhamel GE, Simpson KW, Qi L.

Mol Biol Cell. 2016 Feb 1;27(3):483-90. doi: 10.1091/mbc.E15-10-0724. Epub 2015 Dec 2.


Host genetic variation impacts microbiome composition across human body sites.

Blekhman R, Goodrich JK, Huang K, Sun Q, Bukowski R, Bell JT, Spector TD, Keinan A, Ley RE, Gevers D, Clark AG.

Genome Biol. 2015 Sep 15;16:191. doi: 10.1186/s13059-015-0759-1.


Gut-Microbiota-Metabolite Axis in Early Renal Function Decline.

Barrios C, Beaumont M, Pallister T, Villar J, Goodrich JK, Clark A, Pascual J, Ley RE, Spector TD, Bell JT, Menni C.

PLoS One. 2015 Aug 4;10(8):e0134311. doi: 10.1371/journal.pone.0134311. eCollection 2015.


Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome.

Chassaing B, Koren O, Goodrich JK, Poole AC, Srinivasan S, Ley RE, Gewirtz AT.

Nature. 2015 Mar 5;519(7541):92-6. doi: 10.1038/nature14232. Epub 2015 Feb 25. Erratum in: Nature. 2016 Aug 11;536(7615):238.


An in vitro priming step increases the expression of numerous epidermal growth and migration mediators in a tissue-engineering construct.

Lin X, Kwak T, Fiore D, Thompson PJ, Goodrich JK, Yufit T, Michalowski AM, Deschenes J, Carson P, Otero-Vinas M, Falanga V.

J Tissue Eng Regen Med. 2017 Mar;11(3):713-723. doi: 10.1002/term.1967. Epub 2014 Dec 26.


Human genetics shape the gut microbiome.

Goodrich JK, Waters JL, Poole AC, Sutter JL, Koren O, Blekhman R, Beaumont M, Van Treuren W, Knight R, Bell JT, Spector TD, Clark AG, Ley RE.

Cell. 2014 Nov 6;159(4):789-99. doi: 10.1016/j.cell.2014.09.053.


Selection on soil microbiomes reveals reproducible impacts on plant function.

Panke-Buisse K, Poole AC, Goodrich JK, Ley RE, Kao-Kniffin J.

ISME J. 2015 Mar 17;9(4):980-9. doi: 10.1038/ismej.2014.196.


Conducting a microbiome study.

Goodrich JK, Di Rienzi SC, Poole AC, Koren O, Walters WA, Caporaso JG, Knight R, Ley RE.

Cell. 2014 Jul 17;158(2):250-262. doi: 10.1016/j.cell.2014.06.037.


Diet-induced alterations in gut microflora contribute to lethal pulmonary damage in TLR2/TLR4-deficient mice.

Ji Y, Sun S, Goodrich JK, Kim H, Poole AC, Duhamel GE, Ley RE, Qi L.

Cell Rep. 2014 Jul 10;8(1):137-49. doi: 10.1016/j.celrep.2014.05.040. Epub 2014 Jun 19.


The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria.

Di Rienzi SC, Sharon I, Wrighton KC, Koren O, Hug LA, Thomas BC, Goodrich JK, Bell JT, Spector TD, Banfield JF, Ley RE.

Elife. 2013 Oct 1;2:e01102. doi: 10.7554/eLife.01102.


Transient inability to manage proteobacteria promotes chronic gut inflammation in TLR5-deficient mice.

Carvalho FA, Koren O, Goodrich JK, Johansson ME, Nalbantoglu I, Aitken JD, Su Y, Chassaing B, Walters WA, González A, Clemente JC, Cullender TC, Barnich N, Darfeuille-Michaud A, Vijay-Kumar M, Knight R, Ley RE, Gewirtz AT.

Cell Host Microbe. 2012 Aug 16;12(2):139-52. doi: 10.1016/j.chom.2012.07.004. Epub 2012 Aug 2.


Host remodeling of the gut microbiome and metabolic changes during pregnancy.

Koren O, Goodrich JK, Cullender TC, Spor A, Laitinen K, Bäckhed HK, Gonzalez A, Werner JJ, Angenent LT, Knight R, Bäckhed F, Isolauri E, Salminen S, Ley RE.

Cell. 2012 Aug 3;150(3):470-80. doi: 10.1016/j.cell.2012.07.008.


QIIME allows analysis of high-throughput community sequencing data.

Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R.

Nat Methods. 2010 May;7(5):335-6. doi: 10.1038/nmeth.f.303. Epub 2010 Apr 11. No abstract available.


Relative decreased splenic uptake of Tc-99m-sulfur colloid in patients with pancreatic carcinoma.

Tatum JL, Burke TS, Fratkin MJ, Sharpe AR Jr, Goodrich JK.

Clin Nucl Med. 1982 Jan;7(1):1-4.


Myocardial perfusion imaging using thallium-201: a new algorithm for calculation of background activity.

Beck JW, Tatum JL, Cobb FR, Harris CC, Goodrich JK.

J Nucl Med. 1979 Dec;20(12):1294-300.


Radioiodination of biologically active compounds: a simplified solid-state enzymatic procedure.

Tatum JL, Briner WH, Goodrich JK.

Invest Radiol. 1979 Mar-Apr;14(2):185-8.


Intraoperative relationships between regional myocardial distribution of bypass graft flow and the coronary collateral circulation.

Oldham HN Jr, Jones RH, Harris CC, Howe WR, Goodrich JK, Sabiston DC Jr.

J Thorac Cardiovasc Surg. 1979 Jan;77(1):32-8. No abstract available.


Noninvasive radionuclide procedures for diagnosis and management of myocardial ischemia.

Jones RH, Rerych SK, Newman GE, Scholz PM, Howe WR, Oldham HN, Goodrich JK, Sabiston DC Jr.

World J Surg. 1978 Nov;2(6):811-24. No abstract available.


Evaluation of 99mtechnetium stannous pyrophosphate as an imaging agent in acute myocardial infarction.

Bruno FP, Cobb FR, Rivas F, Goodrich JK.

Circulation. 1976 Jul;54(1):74-8.


Cerebral dynamic studies for early detection of recurrent anaplastic intracranial gliomas.

Witherspoon LR, Mahaley MS Jr, Leonard JR, Tyson JW, Harris CC, Goodrich JK.

J Neurosurg. 1975 Aug;43(2):142-9.


Radionuclide cerebral angiography in Paget's disease (osteitis deformans) of the skull.

Tyson JW, Witherspoon LR, Goodrich JK.

South Med J. 1975 Jun;68(6):778-80. No abstract available.


Value of sequential postoperative brain scans in patients with anaplastic gliomas.

Leonard JR, Witherspoon LR, Mahaley MS Jr, Goodrich JK.

J Neurosurg. 1975 May;42(5):551-6.


Characterization of malignant gliomas and cerebrovascular disease by cerebral dynamic studies.

Witherspoon LR, Preissig RS, Mahaley MS, Tyson JW, Harris CC, Leonard JR, Goodrich JK.

Stroke. 1975 Mar-Apr;6(2):199-205.


Technetium 99m sulfur colloid spleen/liver ratio and other liver tests in the diagnosis of cirrhosis.

Habibian MR, Kutka N, Wilkinson RH Jr, Goodrich JK, Harris CC.

South Med J. 1975 Jan;68(1):5-12.


False-positive 131I total-body scans.

Tyson JW, Wilkinson RH Jr, Witherspoon LR, Goodrich JK.

J Nucl Med. 1974 Nov;15(11):1052-3. No abstract available.


Accuracy of radionuclide cerebral angiograms in the detection of cerebral arteriovenous malformations.

Tyson JW, Witherspoon LR, Wilkinson RH Jr, Goodrich JK.

J Nucl Med. 1974 Nov;15(11):953-8. No abstract available.


Radionuclide blood levels during cisternography of patients with normal-pressure hydrocephalus or Alzheimer's disease.

Mahaley MS Jr, Wilkinson RH Jr, Sivalingham S, Friedman H, Tyson W, Goodrich JK.

J Neurosurg. 1974 Oct;41(4):471-80. No abstract available.


The appearance of peripheral postsurgical activity on cerebral dynamic studies.

Witherspoon LR, Tyson JW, Goodrich JK.

J Nucl Med. 1974 Aug;15(8):709-11. No abstract available.


Evaluation of 133Xe techniques for measurement of regional ventilation.

Jones RH, Goodrich JK, Sabiston DC.

J Nucl Med. 1974 Jul;15(7):598-604. No abstract available.


The action of droperidol and fentanyl on cardiac output and related hemodynamic parameters.

Ferrari HA, Gorten RJ, Talton IH, Canent R, Goodrich JK.

South Med J. 1974 Jan;67(1):49-53. No abstract available.


The uptake of methyl mercury (203Hg) in different tissues related to its neurotoxic effects.

Somjen GG, Herman SP, Klein R, Brubaker PE, Briner WH, Goodrich JK, Krigman MR, Haseman JK.

J Pharmacol Exp Ther. 1973 Dec;187(3):602-11. No abstract available.


Efficiency of nebulizers for depositing saline in human lung.

Asmundsson T, Johnson RF, Kilburn KH, Goodrich JK.

Am Rev Respir Dis. 1973 Sep;108(3):506-12. No abstract available.


Quantitative radionuclide angiocardiography for determination of chamber to chamber cardiac transit times.

Jones RH, Sabiston DC Jr, Bates BB, Morris JJ, Anderson PA, Goodrich JK.

Am J Cardiol. 1972 Dec;30(8):855-64. No abstract available.


Evaluation of the accuracy of radionuclide measurement of regional pulmonary perfusion.

Jones RH, Goodrich JK, Harris CC, Sabiston DC Jr.

Invest Radiol. 1972 Sep-Oct;7(5):357-64. No abstract available.


Xenon-133 measurement of regional ventilation.

Goodrich JK, Jones RH, Coulam CM, Sabiston DC Jr.

Radiology. 1972 Jun;103(3):611-9. No abstract available.


Radionuclide quantitation of lung function in patients with pulmonary disorders.

Jones RH, Coulam CM, Goodrich JK, Sabiston DC Jr.

Surgery. 1971 Dec;70(6):891-903. No abstract available.


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