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Items: 38

1.

Allosteric Regulation of Cyclin-B Binding by the Charge State of Catalytic Lysine in CDK1 Is Essential for Cell-Cycle Progression.

Deota S, Rathnachalam S, Namrata K, Boob M, Fulzele A, Radhika S, Ganguli S, Balaji C, Kaypee S, Vishwakarma KK, Kundu TK, Bhandari R, Gonzalez de Peredo A, Mishra M, Venkatramani R, Kolthur-Seetharam U.

J Mol Biol. 2019 May 17;431(11):2127-2142. doi: 10.1016/j.jmb.2019.04.005. Epub 2019 Apr 9.

PMID:
30974121
2.

Mass Spectrometry-based Absolute Quantification of 20S Proteasome Status for Controlled Ex-vivo Expansion of Human Adipose-derived Mesenchymal Stromal/Stem Cells.

Menneteau T, Fabre B, Garrigues L, Stella A, Zivkovic D, Roux-Dalvai F, Mouton-Barbosa E, Beau M, Renoud ML, Amalric F, Sensébé L, Gonzalez-de-Peredo A, Ader I, Burlet-Schiltz O, Bousquet MP.

Mol Cell Proteomics. 2019 Apr;18(4):744-759. doi: 10.1074/mcp.RA118.000958. Epub 2019 Jan 30.

3.

CD5, an Undercover Regulator of TCR Signaling.

Voisinne G, Gonzalez de Peredo A, Roncagalli R.

Front Immunol. 2018 Dec 7;9:2900. doi: 10.3389/fimmu.2018.02900. eCollection 2018.

4.

Environmental allergens induce allergic inflammation through proteolytic maturation of IL-33.

Cayrol C, Duval A, Schmitt P, Roga S, Camus M, Stella A, Burlet-Schiltz O, Gonzalez-de-Peredo A, Girard JP.

Nat Immunol. 2018 Apr;19(4):375-385. doi: 10.1038/s41590-018-0067-5. Epub 2018 Mar 19.

PMID:
29556000
5.

Asb2α-Filamin A Axis Is Essential for Actin Cytoskeleton Remodeling During Heart Development.

Métais A, Lamsoul I, Melet A, Uttenweiler-Joseph S, Poincloux R, Stefanovic S, Valière A, Gonzalez de Peredo A, Stella A, Burlet-Schiltz O, Zaffran S, Lutz PG, Moog-Lutz C.

Circ Res. 2018 Mar 16;122(6):e34-e48. doi: 10.1161/CIRCRESAHA.117.312015. Epub 2018 Jan 26.

PMID:
29374072
6.

Proteomic Analysis of Regulatory T Cells Reveals the Importance of Themis1 in the Control of Their Suppressive Function.

Duguet F, Locard-Paulet M, Marcellin M, Chaoui K, Bernard I, Andreoletti O, Lesourne R, Burlet-Schiltz O, Gonzalez de Peredo A, Saoudi A.

Mol Cell Proteomics. 2017 Aug;16(8):1416-1432. doi: 10.1074/mcp.M116.062745. Epub 2017 Apr 3.

7.

Identification of a Tissue-Restricted Isoform of SIRT1 Defines a Regulatory Domain that Encodes Specificity.

Deota S, Chattopadhyay T, Ramachandran D, Armstrong E, Camacho B, Maniyadath B, Fulzele A, Gonzalez-de-Peredo A, Denu JM, Kolthur-Seetharam U.

Cell Rep. 2017 Mar 28;18(13):3069-3077. doi: 10.1016/j.celrep.2017.03.012.

8.

Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.

Vandenbrouck Y, Lane L, Carapito C, Duek P, Rondel K, Bruley C, Macron C, Gonzalez de Peredo A, Couté Y, Chaoui K, Com E, Gateau A, Hesse AM, Marcellin M, Méar L, Mouton-Barbosa E, Robin T, Burlet-Schiltz O, Cianferani S, Ferro M, Fréour T, Lindskog C, Garin J, Pineau C.

J Proteome Res. 2016 Nov 4;15(11):3998-4019. Epub 2016 Aug 23.

PMID:
27444420
9.

Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large-scale and targeted quantitative proteomics.

Matondo M, Marcellin M, Chaoui K, Bousquet-Dubouch MP, Gonzalez-de-Peredo A, Monsarrat B, Burlet-Schiltz O.

Proteomics. 2017 Apr;17(7). doi: 10.1002/pmic.201600089. Epub 2016 Dec 21.

10.

Extracellular IL-33 cytokine, but not endogenous nuclear IL-33, regulates protein expression in endothelial cells.

Gautier V, Cayrol C, Farache D, Roga S, Monsarrat B, Burlet-Schiltz O, Gonzalez de Peredo A, Girard JP.

Sci Rep. 2016 Oct 3;6:34255. doi: 10.1038/srep34255.

11.

Ph(-) myeloproliferative neoplasm red blood cells display deregulation of IQGAP1-Rho GTPase signaling depending on CALR/JAK2 status.

Socoro-Yuste N, Dagher MC, Gonzalez De Peredo A, Mondet J, Zaccaria A, Roux Dalvai F, Plo I, Cahn JY, Mossuz P.

Biochim Biophys Acta. 2016 Nov;1863(11):2758-2765. doi: 10.1016/j.bbamcr.2016.08.012. Epub 2016 Aug 24.

12.

Co-recruitment analysis of the CBL and CBLB signalosomes in primary T cells identifies CD5 as a key regulator of TCR-induced ubiquitylation.

Voisinne G, García-Blesa A, Chaoui K, Fiore F, Bergot E, Girard L, Malissen M, Burlet-Schiltz O, Gonzalez de Peredo A, Malissen B, Roncagalli R.

Mol Syst Biol. 2016 Jul 29;12(7):876. doi: 10.15252/msb.20166837.

13.

Themis1 enhances T cell receptor signaling during thymocyte development by promoting Vav1 activity and Grb2 stability.

Zvezdova E, Mikolajczak J, Garreau A, Marcellin M, Rigal L, Lee J, Choi S, Blaize G, Argenty J, Familiades J, Li L, Gonzalez de Peredo A, Burlet-Schiltz O, Love PE, Lesourne R.

Sci Signal. 2016 May 17;9(428):ra51. doi: 10.1126/scisignal.aad1576.

PMID:
27188442
14.

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods.

Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E, Bouyssié D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J, Cianférani S, Ferro M, Dorssaeler AV, Burlet-Schiltz O, Schaeffer C, Couté Y, Gonzalez de Peredo A.

Data Brief. 2015 Dec 17;6:286-94. doi: 10.1016/j.dib.2015.11.063. eCollection 2016 Mar.

15.

Clinical implications of recent advances in proteogenomics.

Locard-Paulet M, Pible O, Gonzalez de Peredo A, Alpha-Bazin B, Almunia C, Burlet-Schiltz O, Armengaud J.

Expert Rev Proteomics. 2016;13(2):185-99. doi: 10.1586/14789450.2016.1132169. Epub 2016 Jan 13.

PMID:
26654119
16.

Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset.

Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E, Bouyssié D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J, Cianférani S, Ferro M, Van Dorssaeler A, Burlet-Schiltz O, Schaeffer C, Couté Y, Gonzalez de Peredo A.

J Proteomics. 2016 Jan 30;132:51-62. doi: 10.1016/j.jprot.2015.11.011. Epub 2015 Nov 14.

PMID:
26585461
17.

Revisiting the Timing of Action of the PAG Adaptor Using Quantitative Proteomics Analysis of Primary T Cells.

Reginald K, Chaoui K, Roncagalli R, Beau M, Goncalves Menoita M, Monsarrat B, Burlet-Schiltz O, Malissen M, Gonzalez de Peredo A, Malissen B.

J Immunol. 2015 Dec 1;195(11):5472-81. doi: 10.4049/jimmunol.1501300. Epub 2015 Oct 28.

18.

Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14.

Carapito C, Lane L, Benama M, Opsomer A, Mouton-Barbosa E, Garrigues L, Gonzalez de Peredo A, Burel A, Bruley C, Gateau A, Bouyssié D, Jaquinod M, Cianferani S, Burlet-Schiltz O, Van Dorsselaer A, Garin J, Vandenbrouck Y.

J Proteome Res. 2015 Sep 4;14(9):3621-34. doi: 10.1021/pr5010345. Epub 2015 Jul 22.

PMID:
26132440
19.

mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets.

Bouyssié D, Dubois M, Nasso S, Gonzalez de Peredo A, Burlet-Schiltz O, Aebersold R, Monsarrat B.

Mol Cell Proteomics. 2015 Mar;14(3):771-81. doi: 10.1074/mcp.O114.039115. Epub 2014 Dec 11.

20.

Label-free quantitative urinary proteomics identifies the arginase pathway as a new player in congenital obstructive nephropathy.

Lacroix C, Caubet C, Gonzalez-de-Peredo A, Breuil B, Bouyssié D, Stella A, Garrigues L, Le Gall C, Raevel A, Massoubre A, Klein J, Decramer S, Sabourdy F, Bandin F, Burlet-Schiltz O, Monsarrat B, Schanstra JP, Bascands JL.

Mol Cell Proteomics. 2014 Dec;13(12):3421-34. doi: 10.1074/mcp.M114.040121. Epub 2014 Sep 9.

21.

Label-free quantitative proteomic analysis of human plasma-derived microvesicles to find protein signatures of abdominal aortic aneurysms.

Martinez-Pinna R, Gonzalez de Peredo A, Monsarrat B, Burlet-Schiltz O, Martin-Ventura JL.

Proteomics Clin Appl. 2014 Aug;8(7-8):620-5. doi: 10.1002/prca.201400010.

PMID:
24888668
22.

Label-free quantification and shotgun analysis of complex proteomes by one-dimensional SDS-PAGE/NanoLC-MS: evaluation for the large scale analysis of inflammatory human endothelial cells.

Gautier V, Mouton-Barbosa E, Bouyssié D, Delcourt N, Beau M, Girard JP, Cayrol C, Burlet-Schiltz O, Monsarrat B, Gonzalez de Peredo A.

Mol Cell Proteomics. 2012 Aug;11(8):527-39. doi: 10.1074/mcp.M111.015230. Epub 2012 Apr 19.

23.

IL-33 is processed into mature bioactive forms by neutrophil elastase and cathepsin G.

Lefrançais E, Roga S, Gautier V, Gonzalez-de-Peredo A, Monsarrat B, Girard JP, Cayrol C.

Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):1673-8. doi: 10.1073/pnas.1115884109. Epub 2012 Jan 17.

24.

Comprehensive human urine standards for comparability and standardization in clinical proteome analysis.

Mischak H, Kolch W, Aivaliotis M, Bouyssié D, Court M, Dihazi H, Dihazi GH, Franke J, Garin J, Gonzalez de Peredo A, Iphöfer A, Jänsch L, Lacroix C, Makridakis M, Masselon C, Metzger J, Monsarrat B, Mrug M, Norling M, Novak J, Pich A, Pitt A, Bongcam-Rudloff E, Siwy J, Suzuki H, Thongboonkerd V, Wang LS, Zoidakis J, Zürbig P, Schanstra JP, Vlahou A.

Proteomics Clin Appl. 2010 Apr;4(4):464-78. doi: 10.1002/prca.200900189. Epub 2010 Feb 3.

25.

The THAP-zinc finger protein THAP1 associates with coactivator HCF-1 and O-GlcNAc transferase: a link between DYT6 and DYT3 dystonias.

Mazars R, Gonzalez-de-Peredo A, Cayrol C, Lavigne AC, Vogel JL, Ortega N, Lacroix C, Gautier V, Huet G, Ray A, Monsarrat B, Kristie TM, Girard JP.

J Biol Chem. 2010 Apr 30;285(18):13364-71. doi: 10.1074/jbc.M109.072579. Epub 2010 Mar 3.

26.

In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification.

Mouton-Barbosa E, Roux-Dalvai F, Bouyssié D, Berger F, Schmidt E, Righetti PG, Guerrier L, Boschetti E, Burlet-Schiltz O, Monsarrat B, Gonzalez de Peredo A.

Mol Cell Proteomics. 2010 May;9(5):1006-21. doi: 10.1074/mcp.M900513-MCP200. Epub 2010 Jan 21.

27.

Urine in clinical proteomics.

Decramer S, Gonzalez de Peredo A, Breuil B, Mischak H, Monsarrat B, Bascands JL, Schanstra JP.

Mol Cell Proteomics. 2008 Oct;7(10):1850-62. doi: 10.1074/mcp.R800001-MCP200. Epub 2008 Jul 30. Review.

28.

Lamellar bodies of human epidermis: proteomics characterization by high throughput mass spectrometry and possible involvement of CLIP-170 in their trafficking/secretion.

Raymond AA, Gonzalez de Peredo A, Stella A, Ishida-Yamamoto A, Bouyssie D, Serre G, Monsarrat B, Simon M.

Mol Cell Proteomics. 2008 Nov;7(11):2151-75. doi: 10.1074/mcp.M700334-MCP200. Epub 2008 Jul 12.

29.

Extensive analysis of the cytoplasmic proteome of human erythrocytes using the peptide ligand library technology and advanced mass spectrometry.

Roux-Dalvai F, Gonzalez de Peredo A, Simó C, Guerrier L, Bouyssié D, Zanella A, Citterio A, Burlet-Schiltz O, Boschetti E, Righetti PG, Monsarrat B.

Mol Cell Proteomics. 2008 Nov;7(11):2254-69. doi: 10.1074/mcp.M800037-MCP200. Epub 2008 Jul 9.

30.

Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human endothelial cells.

Bouyssié D, Gonzalez de Peredo A, Mouton E, Albigot R, Roussel L, Ortega N, Cayrol C, Burlet-Schiltz O, Girard JP, Monsarrat B.

Mol Cell Proteomics. 2007 Sep;6(9):1621-37. Epub 2007 May 28.

31.

Reversible redox- and zinc-dependent dimerization of the Escherichia coli fur protein.

D'Autréaux B, Pecqueur L, Gonzalez de Peredo A, Diederix RE, Caux-Thang C, Tabet L, Bersch B, Forest E, Michaud-Soret I.

Biochemistry. 2007 Feb 6;46(5):1329-42.

PMID:
17260962
32.

General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1.

Oficjalska-Pham D, Harismendy O, Smagowicz WJ, Gonzalez de Peredo A, Boguta M, Sentenac A, Lefebvre O.

Mol Cell. 2006 Jun 9;22(5):623-32.

33.

An optimized strategy for ICAT quantification of membrane proteins.

Ramus C, Gonzalez de Peredo A, Dahout C, Gallagher M, Garin J.

Mol Cell Proteomics. 2006 Jan;5(1):68-78. Epub 2005 Oct 10.

34.

C-mannosylation and o-fucosylation of thrombospondin type 1 repeats.

Gonzalez de Peredo A, Klein D, Macek B, Hess D, Peter-Katalinic J, Hofsteenge J.

Mol Cell Proteomics. 2002 Jan;1(1):11-8.

35.
36.

Identification of the two zinc-bound cysteines in the ferric uptake regulation protein from Escherichia coli: chemical modification and mass spectrometry analysis.

Gonzalez de Peredo A, Saint-Pierre C, Adrait A, Jacquamet L, Latour JM, Michaud-Soret I, Forest E.

Biochemistry. 1999 Jun 29;38(26):8582-9.

PMID:
10387106
37.

Spectroscopic and saturation magnetization properties of the manganese- and cobalt-substituted Fur (ferric uptake regulation) protein from Escherichia coli.

Adrait A, Jacquamet L, Le Pape L, Gonzalez de Peredo A, Aberdam D, Hazemann JL, Latour JM, Michaud-Soret I.

Biochemistry. 1999 May 11;38(19):6248-60.

PMID:
10320354
38.

Synthesis and biological evaluation of flavanones and flavones related to podophyllotoxin.

Gonzalez De Peredo A, Léonce S, Monneret C, Dauzonne D.

Chem Pharm Bull (Tokyo). 1998 Jan;46(1):79-83.

PMID:
9468639

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