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Items: 1 to 50 of 169

1.

Local stress and pressure in an inhomogeneous system of spherical active Brownian particles.

Das S, Gompper G, Winkler RG.

Sci Rep. 2019 Apr 29;9(1):6608. doi: 10.1038/s41598-019-43077-x.

2.

Active Brownian filaments with hydrodynamic interactions: conformations and dynamics.

Martín-Gómez A, Eisenstecken T, Gompper G, Winkler RG.

Soft Matter. 2019 May 15;15(19):3957-3969. doi: 10.1039/c9sm00391f.

PMID:
31012481
3.

Active Brownian Filamentous Polymers under Shear Flow.

Martín-Gómez A, Gompper G, Winkler RG.

Polymers (Basel). 2018 Jul 30;10(8). pii: E837. doi: 10.3390/polym10080837.

4.

Active Brownian ring polymers.

Mousavi SM, Gompper G, Winkler RG.

J Chem Phys. 2019 Feb 14;150(6):064913. doi: 10.1063/1.5082723.

PMID:
30769972
5.

Traction force microscopy with optimized regularization and automated Bayesian parameter selection for comparing cells.

Huang Y, Schell C, Huber TB, Şimşek AN, Hersch N, Merkel R, Gompper G, Sabass B.

Sci Rep. 2019 Jan 24;9(1):539. doi: 10.1038/s41598-018-36896-x.

6.

Chronology of motor-mediated microtubule streaming.

Ravichandran A, Duman Ö, Hoore M, Saggiorato G, Vliegenthart GA, Auth T, Gompper G.

Elife. 2019 Jan 2;8. pii: e39694. doi: 10.7554/eLife.39694.

7.

Weak Shape Anisotropy Leads to a Nonmonotonic Contribution to Crowding, Impacting Protein Dynamics under Physiologically Relevant Conditions.

Myung JS, Roosen-Runge F, Winkler RG, Gompper G, Schurtenberger P, Stradner A.

J Phys Chem B. 2018 Dec 27;122(51):12396-12402. doi: 10.1021/acs.jpcb.8b07901. Epub 2018 Dec 13.

8.

Clustering of microswimmers: interplay of shape and hydrodynamics.

Theers M, Westphal E, Qi K, Winkler RG, Gompper G.

Soft Matter. 2018 Oct 31;14(42):8590-8603. doi: 10.1039/c8sm01390j.

PMID:
30339172
9.

Flow-Induced Transitions of Red Blood Cell Shapes under Shear.

Mauer J, Mendez S, Lanotte L, Nicoud F, Abkarian M, Gompper G, Fedosov DA.

Phys Rev Lett. 2018 Sep 14;121(11):118103. doi: 10.1103/PhysRevLett.121.118103.

PMID:
30265089
10.

Collective behavior of self-propelled rods with quorum sensing.

Abaurrea Velasco C, Abkenar M, Gompper G, Auth T.

Phys Rev E. 2018 Aug;98(2-1):022605. doi: 10.1103/PhysRevE.98.022605.

PMID:
30253508
11.

Effect of spectrin network elasticity on the shapes of erythrocyte doublets.

Hoore M, Yaya F, Podgorski T, Wagner C, Gompper G, Fedosov DA.

Soft Matter. 2018 Aug 1;14(30):6278-6289. doi: 10.1039/c8sm00634b.

PMID:
30014074
12.

Collective dynamics of self-propelled semiflexible filaments.

Duman Ö, Isele-Holder RE, Elgeti J, Gompper G.

Soft Matter. 2018 Jun 6;14(22):4483-4494. doi: 10.1039/c8sm00282g.

PMID:
29808191
13.

Nanoparticle wrapping at small non-spherical vesicles: curvatures at play.

Yu Q, Othman S, Dasgupta S, Auth T, Gompper G.

Nanoscale. 2018 Apr 5;10(14):6445-6458. doi: 10.1039/C7NR08856F.

PMID:
29565057
14.

Steady state sedimentation of ultrasoft colloids.

Singh SP, Gompper G, Winkler RG.

J Chem Phys. 2018 Feb 28;148(8):084901. doi: 10.1063/1.5001886.

PMID:
29495770
15.

Quantitative modelling of nutrient-limited growth of bacterial colonies in microfluidic cultivation.

Hornung R, Grünberger A, Westerwalbesloh C, Kohlheyer D, Gompper G, Elgeti J.

J R Soc Interface. 2018 Feb;15(139). pii: 20170713. doi: 10.1098/rsif.2017.0713.

16.

Spatial correlations of hydrodynamic fluctuations in simple fluids under shear flow: A mesoscale simulation study.

Varghese A, Gompper G, Winkler RG.

Phys Rev E. 2017 Dec;96(6-1):062617. doi: 10.1103/PhysRevE.96.062617. Epub 2017 Dec 28.

PMID:
29347341
17.

Flow-induced adhesion of shear-activated polymers to a substrate.

Hoore M, Rack K, Fedosov DA, Gompper G.

J Phys Condens Matter. 2018 Feb 14;30(6):064001. doi: 10.1088/1361-648X/aaa4d5.

PMID:
29297854
18.

Clustering and dynamics of particles in dispersions with competing interactions: theory and simulation.

Das S, Riest J, Winkler RG, Gompper G, Dhont JKG, Nägele G.

Soft Matter. 2017 Dec 20;14(1):92-103. doi: 10.1039/c7sm02019h.

PMID:
29199754
19.

Active turbulence in a gas of self-assembled spinners.

Kokot G, Das S, Winkler RG, Gompper G, Aranson IS, Snezhko A.

Proc Natl Acad Sci U S A. 2017 Dec 5;114(49):12870-12875. doi: 10.1073/pnas.1710188114. Epub 2017 Nov 20.

20.

Human sperm steer with second harmonics of the flagellar beat.

Saggiorato G, Alvarez L, Jikeli JF, Kaupp UB, Gompper G, Elgeti J.

Nat Commun. 2017 Nov 10;8(1):1415. doi: 10.1038/s41467-017-01462-y.

21.

Margination and stretching of von Willebrand factor in the blood stream enable adhesion.

Rack K, Huck V, Hoore M, Fedosov DA, Schneider SW, Gompper G.

Sci Rep. 2017 Oct 27;7(1):14278. doi: 10.1038/s41598-017-14346-4.

22.

Enhanced Dynamics of Confined Cytoskeletal Filaments Driven by Asymmetric Motors.

Ravichandran A, Vliegenthart GA, Saggiorato G, Auth T, Gompper G.

Biophys J. 2017 Sep 5;113(5):1121-1132. doi: 10.1016/j.bpj.2017.07.016.

23.

Complex self-propelled rings: a minimal model for cell motility.

Abaurrea Velasco C, Dehghani Ghahnaviyeh S, Nejat Pishkenari H, Auth T, Gompper G.

Soft Matter. 2017 Sep 13;13(35):5865-5876. doi: 10.1039/c7sm00439g.

PMID:
28766641
24.

Modeling the cleavage of von Willebrand factor by ADAMTS13 protease in shear flow.

Huisman B, Hoore M, Gompper G, Fedosov DA.

Med Eng Phys. 2017 Oct;48:14-22. doi: 10.1016/j.medengphy.2017.06.044. Epub 2017 Jul 19.

PMID:
28734872
25.

Nano- and microparticles at fluid and biological interfaces.

Dasgupta S, Auth T, Gompper G.

J Phys Condens Matter. 2017 Sep 20;29(37):373003. doi: 10.1088/1361-648X/aa7933. Epub 2017 Jun 13.

PMID:
28608781
26.

Static and dynamic light scattering by red blood cells: A numerical study.

Mauer J, Peltomäki M, Poblete S, Gompper G, Fedosov DA.

PLoS One. 2017 May 4;12(5):e0176799. doi: 10.1371/journal.pone.0176799. eCollection 2017.

27.

Internal dynamics of semiflexible polymers with active noise.

Eisenstecken T, Gompper G, Winkler RG.

J Chem Phys. 2017 Apr 21;146(15):154903. doi: 10.1063/1.4981012.

PMID:
28433012
28.

Dramatic influence of patchy attractions on short-time protein diffusion under crowded conditions.

Bucciarelli S, Myung JS, Farago B, Das S, Vliegenthart GA, Holderer O, Winkler RG, Schurtenberger P, Gompper G, Stradner A.

Sci Adv. 2016 Dec 7;2(12):e1601432. eCollection 2016 Dec.

29.

Red cells' dynamic morphologies govern blood shear thinning under microcirculatory flow conditions.

Lanotte L, Mauer J, Mendez S, Fedosov DA, Fromental JM, Claveria V, Nicoud F, Gompper G, Abkarian M.

Proc Natl Acad Sci U S A. 2016 Nov 22;113(47):13289-13294. Epub 2016 Nov 9. Erratum in: Proc Natl Acad Sci U S A. 2016 Nov 28;:.

30.

Dynamics of self-propelled filaments pushing a load.

Isele-Holder RE, Jäger J, Saggiorato G, Elgeti J, Gompper G.

Soft Matter. 2016 Oct 19;12(41):8495-8505.

PMID:
27759125
31.

Sorting cells by their dynamical properties.

Henry E, Holm SH, Zhang Z, Beech JP, Tegenfeldt JO, Fedosov DA, Gompper G.

Sci Rep. 2016 Oct 6;6:34375. doi: 10.1038/srep34375.

32.

Modeling a spheroidal microswimmer and cooperative swimming in a narrow slit.

Theers M, Westphal E, Gompper G, Winkler RG.

Soft Matter. 2016 Sep 21;12(35):7372-85. doi: 10.1039/c6sm01424k. Epub 2016 Aug 16.

PMID:
27529776
33.

Conformational Properties of Active Semiflexible Polymers.

Eisenstecken T, Gompper G, Winkler RG.

Polymers (Basel). 2016 Aug 12;8(8). pii: E304. doi: 10.3390/polym8080304.

34.

From local to hydrodynamic friction in Brownian motion: A multiparticle collision dynamics simulation study.

Theers M, Westphal E, Gompper G, Winkler RG.

Phys Rev E. 2016 Mar;93(3):032604. doi: 10.1103/PhysRevE.93.032604. Epub 2016 Mar 8.

PMID:
27078411
35.

Behavior of rigid and deformable particles in deterministic lateral displacement devices with different post shapes.

Zhang Z, Henry E, Gompper G, Fedosov DA.

J Chem Phys. 2015 Dec 28;143(24):243145. doi: 10.1063/1.4937171.

PMID:
26723630
36.

Self-organization in suspensions of end-functionalized semiflexible polymers under shear flow.

Myung JS, Winkler RG, Gompper G.

J Chem Phys. 2015 Dec 28;143(24):243117. doi: 10.1063/1.4933368. Erratum in: J Chem Phys. 2015 Nov 28;143(20):209901.

PMID:
26723602
37.

Preface: Special Topic on Coarse Graining of Macromolecules, Biopolymers, and Membranes.

Holm C, Gompper G, Dill KA.

J Chem Phys. 2015 Dec 28;143(24):242901. doi: 10.1063/1.4938430.

PMID:
26723585
38.

Modeling microcirculatory blood flow: current state and future perspectives.

Gompper G, Fedosov DA.

Wiley Interdiscip Rev Syst Biol Med. 2016 Mar-Apr;8(2):157-68. doi: 10.1002/wsbm.1326. Epub 2015 Dec 22. Review.

PMID:
26695350
39.

Hydrodynamic correlations in shear flow: Multiparticle-collision-dynamics simulation study.

Varghese A, Huang CC, Winkler RG, Gompper G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Nov;92(5):053002. doi: 10.1103/PhysRevE.92.053002. Epub 2015 Nov 2.

PMID:
26651774
40.

Publisher's Note: "Self-organization in suspensions of end-functionalized semiflexible polymers under shear flow" [J. Chem. Phys. 143, 243117 (2015)].

Myung JS, Winkler RG, Gompper G.

J Chem Phys. 2015 Nov 28;143(20):209901. doi: 10.1063/1.4936868. No abstract available.

PMID:
26627972
41.

Understanding particle margination in blood flow - A step toward optimized drug delivery systems.

Müller K, Fedosov DA, Gompper G.

Med Eng Phys. 2016 Jan;38(1):2-10. doi: 10.1016/j.medengphy.2015.08.009. Epub 2015 Sep 4.

PMID:
26343228
42.

Effect of angular momentum conservation on hydrodynamic simulations of colloids.

Yang M, Theers M, Hu J, Gompper G, Winkler RG, Ripoll M.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jul;92(1):013301. Epub 2015 Jul 2.

PMID:
26274301
43.

Conformations, hydrodynamic interactions, and instabilities of sedimenting semiflexible filaments.

Saggiorato G, Elgeti J, Winkler RG, Gompper G.

Soft Matter. 2015 Oct 7;11(37):7337-44. doi: 10.1039/c5sm01069a. Epub 2015 Aug 13.

PMID:
26270609
44.

Self-propelled worm-like filaments: spontaneous spiral formation, structure, and dynamics.

Isele-Holder RE, Elgeti J, Gompper G.

Soft Matter. 2015 Sep 28;11(36):7181-90. doi: 10.1039/c5sm01683e. Epub 2015 Aug 10.

PMID:
26256415
45.

Modelling the mechanics and hydrodynamics of swimming E. coli.

Hu J, Yang M, Gompper G, Winkler RG.

Soft Matter. 2015 Oct 28;11(40):7867-76. doi: 10.1039/c5sm01678a. Epub 2015 Aug 10.

PMID:
26256240
46.

Effect of fluid-colloid interactions on the mobility of a thermophoretic microswimmer in non-ideal fluids.

Fedosov DA, Sengupta A, Gompper G.

Soft Matter. 2015 Sep 7;11(33):6703-15. doi: 10.1039/c5sm01364j.

PMID:
26223678
47.

Virial pressure in systems of spherical active Brownian particles.

Winkler RG, Wysocki A, Gompper G.

Soft Matter. 2015 Sep 7;11(33):6680-91. doi: 10.1039/c5sm01412c.

PMID:
26221908
48.

Collective waves in dense and confined microfluidic droplet arrays.

Schiller UD, Fleury JB, Seemann R, Gompper G.

Soft Matter. 2015 Aug 7;11(29):5850-61. doi: 10.1039/c5sm01116g.

PMID:
26107262
49.

Giant adsorption of microswimmers: Duality of shape asymmetry and wall curvature.

Wysocki A, Elgeti J, Gompper G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 May;91(5):050302. Epub 2015 May 28.

PMID:
26066105
50.

Physical Sensing of Surface Properties by Microswimmers--Directing Bacterial Motion via Wall Slip.

Hu J, Wysocki A, Winkler RG, Gompper G.

Sci Rep. 2015 May 20;5:9586. doi: 10.1038/srep09586.

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