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Items: 25

1.
2.

Repurposing an Ancient Protein Core Structure: Structural Studies on FmtA, a Novel Esterase of Staphylococcus aureus.

Dalal V, Kumar P, Rakhaminov G, Qamar A, Fan X, Hunter H, Tomar S, Golemi-Kotra D, Kumar P.

J Mol Biol. 2019 Aug 9;431(17):3107-3123. doi: 10.1016/j.jmb.2019.06.019. Epub 2019 Jun 28.

PMID:
31260692
3.

Fermentative production of butanol: Perspectives on synthetic biology.

Nanda S, Golemi-Kotra D, McDermott JC, Dalai AK, Gökalp I, Kozinski JA.

N Biotechnol. 2017 Jul 25;37(Pt B):210-221. doi: 10.1016/j.nbt.2017.02.006. Epub 2017 Mar 9. Review.

PMID:
28286167
4.

The Staphylococcus aureus Methicillin Resistance Factor FmtA Is a d-Amino Esterase That Acts on Teichoic Acids.

Rahman MM, Hunter HN, Prova S, Verma V, Qamar A, Golemi-Kotra D.

mBio. 2016 Feb 9;7(1):e02070-15. doi: 10.1128/mBio.02070-15.

5.

Active-Site Plasticity Is Essential to Carbapenem Hydrolysis by OXA-58 Class D β-Lactamase of Acinetobacter baumannii.

Pratap S, Katiki M, Gill P, Kumar P, Golemi-Kotra D.

Antimicrob Agents Chemother. 2015 Oct 12;60(1):75-86. doi: 10.1128/AAC.01393-15. Print 2016 Jan.

6.

Diversity of two-component systems: insights into the signal transduction mechanism by the  Staphylococcus aureus two-component system GraSR.

Muzamal U, Gomez D, Kapadia F, Golemi-Kotra D.

Version 2. F1000Res. 2014 Oct 27 [revised 2014 Jan 1];3:252. doi: 10.12688/f1000research.5512.2. eCollection 2014.

7.

Signaling mechanism by the Staphylococcus aureus two-component system LytSR: role of acetyl phosphate in bypassing the cell membrane electrical potential sensor LytS.

Patel K, Golemi-Kotra D.

Version 2. F1000Res. 2015 Mar 26 [revised 2016 Jan 1];4:79. doi: 10.12688/f1000research.6213.2. eCollection 2015.

8.

Expression, purification, crystallization and preliminary X-ray analysis of the receiver domain of Staphylococcus aureus LytR protein.

Shala A, Patel KH, Golemi-Kotra D, Audette GF.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Dec;69(Pt 12):1418-21. doi: 10.1107/S1744309113030972. Epub 2013 Nov 29.

9.

Two unique phosphorylation-driven signaling pathways crosstalk in Staphylococcus aureus to modulate the cell-wall charge: Stk1/Stp1 meets GraSR.

Fridman M, Williams GD, Muzamal U, Hunter H, Siu KW, Golemi-Kotra D.

Biochemistry. 2013 Nov 12;52(45):7975-86. doi: 10.1021/bi401177n. Epub 2013 Oct 31.

PMID:
24102310
10.

Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation.

Leonard PG, Golemi-Kotra D, Stock AM.

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8525-30. doi: 10.1073/pnas.1302819110. Epub 2013 May 6.

11.

An electrospray ms-coupled microfluidic device for sub-second hydrogen/deuterium exchange pulse-labelling reveals allosteric effects in enzyme inhibition.

Rob T, Gill PK, Golemi-Kotra D, Wilson DJ.

Lab Chip. 2013 Jul 7;13(13):2528-32. doi: 10.1039/c3lc00007a. Epub 2013 Feb 21.

PMID:
23426018
12.

Staphylococcus aureus methicillin-resistance factor fmtA is regulated by the global regulator SarA.

Zhao Y, Verma V, Belcheva A, Singh A, Fridman M, Golemi-Kotra D.

PLoS One. 2012;7(8):e43998. doi: 10.1371/journal.pone.0043998. Epub 2012 Aug 30.

13.

Dual roles of FmtA in Staphylococcus aureus cell wall biosynthesis and autolysis.

Qamar A, Golemi-Kotra D.

Antimicrob Agents Chemother. 2012 Jul;56(7):3797-805. doi: 10.1128/AAC.00187-12. Epub 2012 May 7.

14.

Roles of DNA sequence and sigma A factor in transcription of the vraSR operon.

Belcheva A, Verma V, Korenevsky A, Fridman M, Kumar K, Golemi-Kotra D.

J Bacteriol. 2012 Jan;194(1):61-71. doi: 10.1128/JB.06143-11. Epub 2011 Oct 21.

15.

Hydrolytic mechanism of OXA-58 enzyme, a carbapenem-hydrolyzing class D β-lactamase from Acinetobacter baumannii.

Verma V, Testero SA, Amini K, Wei W, Liu J, Balachandran N, Monoharan T, Stynes S, Kotra LP, Golemi-Kotra D.

J Biol Chem. 2011 Oct 28;286(43):37292-303. doi: 10.1074/jbc.M111.280115. Epub 2011 Aug 31.

16.

Phosphorylation-induced activation of the response regulator VraR from Staphylococcus aureus: insights from hydrogen exchange mass spectrometry.

Liu YH, Belcheva A, Konermann L, Golemi-Kotra D.

J Mol Biol. 2009 Aug 7;391(1):149-63. doi: 10.1016/j.jmb.2009.06.017. Epub 2009 Jun 9.

PMID:
19520087
17.
18.

A close-up view of the VraSR two-component system. A mediator of Staphylococcus aureus response to cell wall damage.

Belcheva A, Golemi-Kotra D.

J Biol Chem. 2008 May 2;283(18):12354-64. doi: 10.1074/jbc.M710010200. Epub 2008 Mar 7.

19.

Miniature protein ligands for EVH1 domains: interplay between affinity, specificity, and cell motility.

Holtzman JH, Woronowicz K, Golemi-Kotra D, Schepartz A.

Biochemistry. 2007 Nov 27;46(47):13541-53. Epub 2007 Nov 1.

20.

Diversity of penicillin-binding proteins. Resistance factor FmtA of Staphylococcus aureus.

Fan X, Liu Y, Smith D, Konermann L, Siu KW, Golemi-Kotra D.

J Biol Chem. 2007 Nov 30;282(48):35143-52. Epub 2007 Oct 9.

21.

Structural consequences of the inhibitor-resistant Ser130Gly substitution in TEM beta-lactamase.

Thomas VL, Golemi-Kotra D, Kim C, Vakulenko SB, Mobashery S, Shoichet BK.

Biochemistry. 2005 Jul 5;44(26):9330-8.

22.

The importance of a critical protonation state and the fate of the catalytic steps in class A beta-lactamases and penicillin-binding proteins.

Golemi-Kotra D, Meroueh SO, Kim C, Vakulenko SB, Bulychev A, Stemmler AJ, Stemmler TL, Mobashery S.

J Biol Chem. 2004 Aug 13;279(33):34665-73. Epub 2004 May 19.

23.

High affinity, paralog-specific recognition of the Mena EVH1 domain by a miniature protein.

Golemi-Kotra D, Mahaffy R, Footer MJ, Holtzman JH, Pollard TD, Theriot JA, Schepartz A.

J Am Chem Soc. 2004 Jan 14;126(1):4-5.

PMID:
14709031
24.

Resistance to beta-lactam antibiotics and its mediation by the sensor domain of the transmembrane BlaR signaling pathway in Staphylococcus aureus.

Golemi-Kotra D, Cha JY, Meroueh SO, Vakulenko SB, Mobashery S.

J Biol Chem. 2003 May 16;278(20):18419-25. Epub 2003 Feb 18.

25.

High-resolution X-ray structure of an acyl-enzyme species for the class D OXA-10 beta-lactamase.

Maveyraud L, Golemi-Kotra D, Ishiwata A, Meroueh O, Mobashery S, Samama JP.

J Am Chem Soc. 2002 Mar 20;124(11):2461-5.

PMID:
11890794

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