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Items: 1 to 50 of 142

1.

Multi-rhythmicity generated by coupling two cellular rhythms.

Yan J, Goldbeter A.

J R Soc Interface. 2019 Mar 29;16(152):20180835. doi: 10.1098/rsif.2018.0835.

2.

The positive circadian regulators CLOCK and BMAL1 control G2/M cell cycle transition through Cyclin B1.

Farshadi E, Yan J, Leclere P, Goldbeter A, Chaves I, van der Horst GTJ.

Cell Cycle. 2019 Jan;18(1):16-33. doi: 10.1080/15384101.2018.1558638. Epub 2018 Dec 28.

3.

Revisiting a skeleton model for the mammalian cell cycle: From bistability to Cdk oscillations and cellular heterogeneity.

Gérard C, Gonze D, Goldbeter A.

J Theor Biol. 2019 Jan 14;461:276-290. doi: 10.1016/j.jtbi.2018.10.042. Epub 2018 Oct 21.

PMID:
30352237
4.

Dissipative structures in biological systems: bistability, oscillations, spatial patterns and waves.

Goldbeter A.

Philos Trans A Math Phys Eng Sci. 2018 Jul 28;376(2124). pii: 20170376. doi: 10.1098/rsta.2017.0376. Review.

5.

Modeling-Based Investigation of the Effect of Noise in Cellular Systems.

Gonze D, Gérard C, Wacquier B, Woller A, Tosenberger A, Goldbeter A, Dupont G.

Front Mol Biosci. 2018 Apr 12;5:34. doi: 10.3389/fmolb.2018.00034. eCollection 2018. Review.

6.

Dissipative structures and biological rhythms.

Goldbeter A.

Chaos. 2017 Oct;27(10):104612. doi: 10.1063/1.4990783.

PMID:
29092409
7.

Cell Fate Specification Based on Tristability in the Inner Cell Mass of Mouse Blastocysts.

De Mot L, Gonze D, Bessonnard S, Chazaud C, Goldbeter A, Dupont G.

Biophys J. 2016 Feb 2;110(3):710-722. doi: 10.1016/j.bpj.2015.12.020.

8.

Dynamics of the mammalian cell cycle in physiological and pathological conditions.

Gérard C, Goldbeter A.

Wiley Interdiscip Rev Syst Biol Med. 2016 Mar-Apr;8(2):140-56. doi: 10.1002/wsbm.1325. Epub 2015 Nov 27. Review.

PMID:
26613368
9.

Gata6, Nanog and Erk signaling control cell fate in the inner cell mass through a tristable regulatory network.

Bessonnard S, De Mot L, Gonze D, Barriol M, Dennis C, Goldbeter A, Dupont G, Chazaud C.

Development. 2014 Oct;141(19):3637-48. doi: 10.1242/dev.109678. Epub 2014 Sep 10.

10.

The balance between cell cycle arrest and cell proliferation: control by the extracellular matrix and by contact inhibition.

Gérard C, Goldbeter A.

Interface Focus. 2014 Jun 6;4(3):20130075. doi: 10.1098/rsfs.2013.0075.

11.

Oscillatory enzyme reactions and Michaelis-Menten kinetics.

Goldbeter A.

FEBS Lett. 2013 Sep 2;587(17):2778-84. doi: 10.1016/j.febslet.2013.07.031. Epub 2013 Jul 23. Review.

12.

Critical phase shifts slow down circadian clock recovery: implications for jet lag.

Leloup JC, Goldbeter A.

J Theor Biol. 2013 Sep 21;333:47-57. doi: 10.1016/j.jtbi.2013.04.039. Epub 2013 May 10.

PMID:
23669506
13.

Origin of cyclicity in bipolar disorders: a computational approach.

Goldbeter A.

Pharmacopsychiatry. 2013 May;46 Suppl 1:S44-52. doi: 10.1055/s-0033-1341502. Epub 2013 Apr 18. Review.

PMID:
23599245
14.

From quiescence to proliferation: Cdk oscillations drive the mammalian cell cycle.

Gérard C, Goldbeter A.

Front Physiol. 2012 Nov 2;3:413. doi: 10.3389/fphys.2012.00413. eCollection 2012.

15.

Systems biology of cellular rhythms.

Goldbeter A, Gérard C, Gonze D, Leloup JC, Dupont G.

FEBS Lett. 2012 Aug 31;586(18):2955-65. doi: 10.1016/j.febslet.2012.07.041. Epub 2012 Jul 25. Review.

16.

Entrainment of the mammalian cell cycle by the circadian clock: modeling two coupled cellular rhythms.

Gérard C, Goldbeter A.

PLoS Comput Biol. 2012 May;8(5):e1002516. doi: 10.1371/journal.pcbi.1002516. Epub 2012 May 31.

17.

Effect of positive feedback loops on the robustness of oscillations in the network of cyclin-dependent kinases driving the mammalian cell cycle.

Gérard C, Gonze D, Goldbeter A.

FEBS J. 2012 Sep;279(18):3411-31. doi: 10.1111/j.1742-4658.2012.08585.x. Epub 2012 May 8.

18.

An automaton model for the cell cycle.

Altinok A, Gonze D, Lévi F, Goldbeter A.

Interface Focus. 2011 Feb 6;1(1):36-47. doi: 10.1098/rsfs.2010.0009. Epub 2010 Nov 24.

19.

A skeleton model for the network of cyclin-dependent kinases driving the mammalian cell cycle.

Gérard C, Goldbeter A.

Interface Focus. 2011 Feb 6;1(1):24-35. doi: 10.1098/rsfs.2010.0008. Epub 2010 Dec 1.

20.

[Biological oscillations: clocks for all times].

Goldbeter A.

Med Sci (Paris). 2011 Feb;27(2):115-6. French. No abstract available.

PMID:
21545061
21.

Modelling the dual role of Per phosphorylation and its effect on the period and phase of the mammalian circadian clock.

Leloup JC, Goldbeter A.

IET Syst Biol. 2011 Jan;5(1):44. doi: 10.1049/iet-syb.2009.0068.

PMID:
21261401
22.
23.

A model for the dynamics of bipolar disorders.

Goldbeter A.

Prog Biophys Mol Biol. 2011 Mar;105(1-2):119-27. doi: 10.1016/j.pbiomolbio.2010.11.007. Epub 2010 Nov 27.

PMID:
21115030
24.

[Circadian rhythms and systems biology].

Goldbeter A, Gérard C, Leloup JC.

Med Sci (Paris). 2010 Jan;26(1):49-56. doi: 10.1051/medsci/201026149. Review. French.

25.

Temporal self-organization of the cyclin/Cdk network driving the mammalian cell cycle.

Gérard C, Goldbeter A.

Proc Natl Acad Sci U S A. 2009 Dec 22;106(51):21643-8. doi: 10.1073/pnas.0903827106. Epub 2009 Dec 9.

26.

Dependence of the period on the rate of protein degradation in minimal models for circadian oscillations.

Gérard C, Gonze D, Goldbeter A.

Philos Trans A Math Phys Eng Sci. 2009 Dec 13;367(1908):4665-83. doi: 10.1098/rsta.2009.0133.

PMID:
19884174
27.

Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008).

Aebersold R, Auffray C, Baney E, Barillot E, Brazma A, Brett C, Brunak S, Butte A, Califano A, Celis J, Cufer T, Ferrell J, Galas D, Gallahan D, Gatenby R, Goldbeter A, Hace N, Henney A, Hood L, Iyengar R, Jackson V, Kallioniemi O, Klingmüller U, Kolar P, Kolch W, Kyriakopoulou C, Laplace F, Lehrach H, Marcus F, Matrisian L, Nolan G, Pelkmans L, Potti A, Sander C, Seljak M, Singer D, Sorger P, Stunnenberg H, Superti-Furga G, Uhlen M, Vidal M, Weinstein J, Wigle D, Williams M, Wolkenhauer O, Zhivotovsky B, Zinovyev A, Zupan B.

Mol Oncol. 2009 Feb;3(1):9-17. doi: 10.1016/j.molonc.2008.11.003. Epub 2008 Dec 9.

28.

Selection of in-phase or out-of-phase synchronization in a model based on global coupling of cells undergoing metabolic oscillations.

Gonze D, Markadieu N, Goldbeter A.

Chaos. 2008 Sep;18(3):037127. doi: 10.1063/1.2983753.

PMID:
19045501
29.

Identifying mechanisms of chronotolerance and chronoefficacy for the anticancer drugs 5-fluorouracil and oxaliplatin by computational modeling.

Altinok A, Lévi F, Goldbeter A.

Eur J Pharm Sci. 2009 Jan 31;36(1):20-38. doi: 10.1016/j.ejps.2008.10.024. Epub 2008 Nov 11. Review.

PMID:
19041394
30.

Biological rhythms: clocks for all times.

Goldbeter A.

Curr Biol. 2008 Sep 9;18(17):R751-R753. doi: 10.1016/j.cub.2008.06.044. No abstract available.

31.

Implications of circadian clocks for the rhythmic delivery of cancer therapeutics.

Lévi F, Altinok A, Clairambault J, Goldbeter A.

Philos Trans A Math Phys Eng Sci. 2008 Oct 13;366(1880):3575-98. doi: 10.1098/rsta.2008.0114. Review. Erratum in: Philos Transact A Math Phys Eng Sci. 2008 Dec 28;366(1885):4665-6.

PMID:
18644767
32.

Biological switches and clocks.

Tyson JJ, Albert R, Goldbeter A, Ruoff P, Sible J.

J R Soc Interface. 2008 Aug 6;5 Suppl 1:S1-8. doi: 10.1098/rsif.2008.0179.focus.

33.

Stochastic modelling of nucleocytoplasmic oscillations of the transcription factor Msn2 in yeast.

Gonze D, Jacquet M, Goldbeter A.

J R Soc Interface. 2008 Aug 6;5 Suppl 1:S95-109. doi: 10.1098/rsif.2008.0141.focus.

34.

Modeling the circadian clock: from molecular mechanism to physiological disorders.

Leloup JC, Goldbeter A.

Bioessays. 2008 Jun;30(6):590-600. doi: 10.1002/bies.20762. Review.

PMID:
18478538
35.

Modeling the segmentation clock as a network of coupled oscillations in the Notch, Wnt and FGF signaling pathways.

Goldbeter A, Pourquié O.

J Theor Biol. 2008 Jun 7;252(3):574-85. doi: 10.1016/j.jtbi.2008.01.006. Epub 2008 Jan 18.

PMID:
18308339
36.

Arginine biosynthesis in Escherichia coli: experimental perturbation and mathematical modeling.

Caldara M, Dupont G, Leroy F, Goldbeter A, De Vuyst L, Cunin R.

J Biol Chem. 2008 Mar 7;283(10):6347-58. doi: 10.1074/jbc.M705884200. Epub 2007 Dec 28.

38.

A cell cycle automaton model for probing circadian patterns of anticancer drug delivery.

Altinok A, Lévi F, Goldbeter A.

Adv Drug Deliv Rev. 2007 Aug 31;59(9-10):1036-53. Epub 2007 Jun 28. Review.

PMID:
17692993
39.

Nucleocytoplasmic oscillations of the yeast transcription factor Msn2: evidence for periodic PKA activation.

Garmendia-Torres C, Goldbeter A, Jacquet M.

Curr Biol. 2007 Jun 19;17(12):1044-9.

40.
41.

Report of an EU projects workshop on systems biology held in Brussels, Belgium on 8 December 2004.

Birney E, Ciliberto A, Colding-Jørgensen M, Goldbeter A, Hohmann S, Kuiper M, Lehrach H, Miczka G, Mosekilde E, Westerhoff H, Wolkenhauer O.

Syst Biol (Stevenage). 2005 Jun;152(2):55-60. No abstract available.

PMID:
17044232
42.

Coexistence of multiple propagating wave-fronts in a regulated enzyme reaction model: link with birhythmicity and multi-threshold excitability.

Pérez-Iratxeta C, Halloy J, Morán F, Martiel JL, Goldbeter A.

Biophys Chem. 1998 Sep 14;74(3):197-207.

PMID:
17029746
43.

From bistability to oscillations in a model for the isocitrate dehydrogenase reaction.

Guidi GM, Goldbeter A.

Biophys Chem. 1998 May 5;72(1-2):201-10.

PMID:
17029707
44.
45.

Circadian rhythms and molecular noise.

Gonze D, Goldbeter A.

Chaos. 2006 Jun;16(2):026110.

PMID:
16822042
46.

Zero-order switches and developmental thresholds.

Goldbeter A.

Mol Syst Biol. 2005;1:2005.0031. Epub 2005 Dec 13. No abstract available.

47.

Amplitude of circadian oscillations entrained by 24-h light-dark cycles.

Kurosawa G, Goldbeter A.

J Theor Biol. 2006 Sep 21;242(2):478-88. Epub 2006 Mar 28.

PMID:
16678857
48.

A model for the dynamics of human weight cycling.

Goldbeter A.

J Biosci. 2006 Mar;31(1):129-36.

PMID:
16595882
49.

A biochemical oscillator explains several aspects of Myxococcus xanthus behavior during development.

Igoshin OA, Goldbeter A, Kaiser D, Oster G.

Proc Natl Acad Sci U S A. 2004 Nov 2;101(44):15760-5. Epub 2004 Oct 20.

50.

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