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Items: 1 to 50 of 134

1.

Ultrasound simulation with deformable and patient-specific scatterer maps.

Starkov R, Zhang L, Bajka M, Tanner C, Goksel O.

Int J Comput Assist Radiol Surg. 2019 Aug 21. doi: 10.1007/s11548-019-02054-5. [Epub ahead of print]

PMID:
31435812
2.

Spectral Quantification of Nonlinear Elasticity using Acousto-elasticity and Shear-Wave Dispersion.

Otesteanu CF, Chintada BR, Rominger MB, Sanabria SJ, Goksel O.

IEEE Trans Ultrason Ferroelectr Freq Control. 2019 Aug 8. doi: 10.1109/TUFFC.2019.2933952. [Epub ahead of print]

PMID:
31398118
3.

Breast Density Assessment in Young Women with Ultrasound based on Speed of Sound: Influence of the Menstrual Cycle.

Ruby L, Sanabria SJ, Obrist AS, Martini K, Forte S, Goksel O, Frauenfelder T, Kubik-Huch RA, Rominger MB.

Medicine (Baltimore). 2019 Jun;98(25):e16123. doi: 10.1097/MD.0000000000016123.

4.

In-Vivo Quantitative Image Analysis of Age-Related Morphological Changes of C. elegans Neurons Reveals a Correlation between Neurite Bending and Novel Neurite Outgrowths.

Hess M, Gomariz A, Goksel O, Ewald CY.

eNeuro. 2019 Jul 10;6(4). pii: ENEURO.0014-19.2019. doi: 10.1523/ENEURO.0014-19.2019. Print 2019 Jul/Aug.

5.

Extending pretrained segmentation networks with additional anatomical structures.

Ozdemir F, Goksel O.

Int J Comput Assist Radiol Surg. 2019 Jul;14(7):1187-1195. doi: 10.1007/s11548-019-01984-4. Epub 2019 May 2.

PMID:
31049802
6.

Endovascular Repair of Iliac Artery Aneurysms: A Single Center Experience in 10-Years.

Goksel OS, Gok E, Onalan MA, Güven K, Capar G, Cinar B, Alpagut IU.

Heart Surg Forum. 2019 Feb 25;22(2):E088-E091. doi: 10.1532/hsf.2001.

PMID:
31013215
7.

Immunological methods for diagnosis and monitoring of IgE-mediated allergy caused by industrial sensitizing agents (IMExAllergy).

Baur X, Akdis CA, Budnik LT, Cruz MJ, Fischer A, Förster-Ruhrmann U, Göen T, Goksel O, Heutelbeck AR, Jones M, Lux H, Maestrelli P, Munoz X, Nemery B, Schlünssen V, Sigsgaard T, Traidl-Hoffmann C, Siegel P.

Allergy. 2019 Apr 6. doi: 10.1111/all.13809. [Epub ahead of print] Review.

PMID:
30953599
8.

A comprehensive and volumetric musculoskeletal model for the dynamic simulation of the shoulder function.

Péan F, Tanner C, Gerber C, Fürnstahl P, Goksel O.

Comput Methods Biomech Biomed Engin. 2019 May;22(7):740-751. doi: 10.1080/10255842.2019.1588963. Epub 2019 Apr 1.

PMID:
30931621
9.

Breast Cancer Assessment With Pulse-Echo Speed of Sound Ultrasound From Intrinsic Tissue Reflections: Proof-of-Concept.

Ruby L, Sanabria SJ, Martini K, Dedes KJ, Vorburger D, Oezkan E, Frauenfelder T, Goksel O, Rominger MB.

Invest Radiol. 2019 Jul;54(7):419-427. doi: 10.1097/RLI.0000000000000553.

PMID:
30913054
10.

Acoustic Field Characterization of Medical Array Transducers Based on Unfocused Transmits and Single-Plane Hydrophone Measurements.

Marhenke T, Sanabria SJ, Chintada BR, Furrer R, Neuenschwander J, Goksel O.

Sensors (Basel). 2019 Feb 19;19(4). pii: E863. doi: 10.3390/s19040863.

11.

High-Quality Immunohistochemical Stains through Computational Assay Parameter Optimization.

Arar NM, Pati P, Kashyap A, Fomitcheva Khartchenko A, Goksel O, Kaigala GV, Gabrani M.

IEEE Trans Biomed Eng. 2019 Feb 13. doi: 10.1109/TBME.2019.2899156. [Epub ahead of print]

PMID:
30762525
12.

ELPHA: Dynamically deformable liver phantom for real-time motion-adaptive radiotherapy treatments.

Ehrbar S, Jöhl A, Kühni M, Meboldt M, Ozkan Elsen E, Tanner C, Goksel O, Klöck S, Unkelbach J, Guckenberger M, Tanadini-Lang S.

Med Phys. 2019 Feb;46(2):839-850. doi: 10.1002/mp.13359. Epub 2019 Jan 16.

PMID:
30588635
13.

Speed-of-Sound Imaging Based on Reflector Delineation.

Sanabria SJ, Rominger MB, Goksel O.

IEEE Trans Biomed Eng. 2018 Nov 14. doi: 10.1109/TBME.2018.2881302. [Epub ahead of print]

PMID:
30442599
14.

Spatial domain reconstruction for imaging speed-of-sound with pulse-echo ultrasound: simulation and in vivo study.

Sanabria SJ, Ozkan E, Rominger M, Goksel O.

Phys Med Biol. 2018 Oct 26;63(21):215015. doi: 10.1088/1361-6560/aae2fb.

PMID:
30365398
15.

Speed of sound ultrasound: a pilot study on a novel technique to identify sarcopenia in seniors.

Sanabria SJ, Martini K, Freystätter G, Ruby L, Goksel O, Frauenfelder T, Rominger MB.

Eur Radiol. 2019 Jan;29(1):3-12. doi: 10.1007/s00330-018-5742-2. Epub 2018 Oct 15.

PMID:
30324383
16.

Evaluation of 2D and 3D ultrasound tracking algorithms and impact on ultrasound-guided liver radiotherapy margins.

De Luca V, Banerjee J, Hallack A, Kondo S, Makhinya M, Nouri D, Royer L, Cifor A, Dardenne G, Goksel O, Gooding MJ, Klink C, Krupa A, Le Bras A, Marchal M, Moelker A, Niessen WJ, Papiez BW, Rothberg A, Schnabel J, van Walsum T, Harris E, Lediju Bell MA, Tanner C.

Med Phys. 2018 Nov;45(11):4986-5003. doi: 10.1002/mp.13152. Epub 2018 Oct 1.

PMID:
30168159
17.

Real-Time FEM-Based Registration of 3-D to 2.5-D Transrectal Ultrasound Images.

Samei G, Goksel O, Lobo J, Mohareri O, Black P, Rohling R, Salcudean S.

IEEE Trans Med Imaging. 2018 Aug;37(8):1877-1886. doi: 10.1109/TMI.2018.2810778. Epub 2018 Feb 28.

PMID:
29994583
18.

Robust Reconstruction of Elasticity Using Ultrasound Imaging and Multi-Frequency Excitations.

Otesteanu CF, Sanabria SJ, Goksel O.

IEEE Trans Med Imaging. 2018 Nov;37(11):2502-2513. doi: 10.1109/TMI.2018.2837390. Epub 2018 May 16.

PMID:
29994521
19.

Midterm results with drug-coated balloons for SFA lesions in patients with CLI: comparison with conventional bypass surgery.

Goksel OS, Karpuzoğlu E, Işsever H, Çinar B.

Int Angiol. 2018 Oct;37(5):365-369. doi: 10.23736/S0392-9590.18.03957-3. Epub 2018 Jun 29.

PMID:
29963797
20.

Quantitative spatial analysis of haematopoiesis-regulating stromal cells in the bone marrow microenvironment by 3D microscopy.

Gomariz A, Helbling PM, Isringhausen S, Suessbier U, Becker A, Boss A, Nagasawa T, Paul G, Goksel O, Székely G, Stoma S, Nørrelykke SF, Manz MG, Nombela-Arrieta C.

Nat Commun. 2018 Jun 28;9(1):2532. doi: 10.1038/s41467-018-04770-z.

21.

Long-Term Omalizumab Treatment: A Multicenter, Real-Life, 5-Year Trial.

Yorgancıoğlu A, Öner Erkekol F, Mungan D, Erdinç M, Gemicioğlu B, Özşeker ZF, Bayrak Değirmenci P, Naycı S, Çilli A, Erdenen F, Kırmaz C, Ediger D, Yalçın AD, Büyüköztürk S, Öztürk S, Güleç M, Işık SR, Kalyoncu AF, Göksel Ö, Aydın Ö, Havlucu Y, Baloğlu Ar İ, Erdoğdu A.

Int Arch Allergy Immunol. 2018;176(3-4):225-233. doi: 10.1159/000488349. Epub 2018 May 17.

PMID:
29772578
22.

FEM-based elasticity reconstruction using ultrasound for imaging tissue ablation.

Otesteanu CF, Vishnevsky V, Goksel O.

Int J Comput Assist Radiol Surg. 2018 Jun;13(6):885-894. doi: 10.1007/s11548-018-1714-x. Epub 2018 Apr 17.

PMID:
29666974
23.

Registration of 3D freehand ultrasound to a bone model for orthopedic procedures of the forearm.

Ciganovic M, Ozdemir F, Pean F, Fuernstahl P, Tanner C, Goksel O.

Int J Comput Assist Radiol Surg. 2018 Jun;13(6):827-836. doi: 10.1007/s11548-018-1756-0. Epub 2018 Apr 5.

PMID:
29623539
24.

Breast-density assessment with hand-held ultrasound: A novel biomarker to assess breast cancer risk and to tailor screening?

Sanabria SJ, Goksel O, Martini K, Forte S, Frauenfelder T, Kubik-Huch RA, Rominger MB.

Eur Radiol. 2018 Aug;28(8):3165-3175. doi: 10.1007/s00330-017-5287-9. Epub 2018 Mar 19.

PMID:
29556766
25.

Image-Based Reconstruction of Tissue Scatterers Using Beam Steering for Ultrasound Simulation.

Mattausch O, Goksel O.

IEEE Trans Med Imaging. 2018 Mar;37(3):767-780. doi: 10.1109/TMI.2017.2770118.

PMID:
29533894
26.

Inverse Problem of Ultrasound Beamforming With Sparsity Constraints and Regularization.

Ozkan E, Vishnevsky V, Goksel O.

IEEE Trans Ultrason Ferroelectr Freq Control. 2018 Mar;65(3):356-365. doi: 10.1109/TUFFC.2017.2757880. Epub 2017 Sep 28.

PMID:
28961111
27.

Automatic registration of 2D histological sections to 3D microCT volumes: Trabecular bone.

Lundin EL, Stauber M, Papageorgiou P, Ehrbar M, Ghayor C, Weber FE, Tanner C, Goksel O.

Bone. 2017 Dec;105:173-183. doi: 10.1016/j.bone.2017.08.021. Epub 2017 Sep 1.

PMID:
28867374
28.

Consistent reconstruction of 4D fetal heart ultrasound images to cope with fetal motion.

Tanner C, Flach B, Eggenberger C, Mattausch O, Bajka M, Goksel O.

Int J Comput Assist Radiol Surg. 2017 Aug;12(8):1307-1317. doi: 10.1007/s11548-017-1624-3. Epub 2017 Jun 20.

PMID:
28634788
29.

Evaluation of Inferior Turbinate Stroma with Ultrasound Elastography in Allergic Rhinitis Patients.

Turhal G, Göde S, Tunakan Dalgıç C, Sin AZ, Kısmalı E, Kaya İ, Öztürk A, Göksel Ö, Midilli R, Öztürk K, Karcı B.

Balkan Med J. 2017 Aug 4;34(4):318-322. doi: 10.4274/balkanmedj.2016.1339. Epub 2017 Apr 6.

30.

Interactive segmentation in MRI for orthopedic surgery planning: bone tissue.

Ozdemir F, Karani N, Fürnstahl P, Goksel O.

Int J Comput Assist Radiol Surg. 2017 Jun;12(6):1031-1039. doi: 10.1007/s11548-017-1570-0. Epub 2017 Mar 24.

PMID:
28342107
31.

Robust motion tracking in liver from 2D ultrasound images using supporters.

Ozkan E, Tanner C, Kastelic M, Mattausch O, Makhinya M, Goksel O.

Int J Comput Assist Radiol Surg. 2017 Jun;12(6):941-950. doi: 10.1007/s11548-017-1559-8. Epub 2017 Mar 22.

PMID:
28332160
32.

Staged or Combined Approach for Carotid Endarterectomy in Patients Undergoing Coronary Artery Bypass Grafting: A 5-Year-Long Experience.

Oz K, Aydın Ü, Kyaruzi M, Karaman Z, Göksel OS, Yeniterzi M, Bakir I.

Heart Surg Forum. 2016 Dec 7;19(6):E276-E281. doi: 10.1532/hsf.1551.

PMID:
28054896
33.

What is the clinical value of negative predictive values of skin tests to iodinated contrast media?

Soyyigit S, Goksel O, Aydin O, Gencturk Z, Bavbek S.

Allergy Asthma Proc. 2016 Nov;37(6):482-488. doi: 10.2500/aap.2016.37.4000.

PMID:
27931304
34.

Cloud-Based Evaluation of Anatomical Structure Segmentation and Landmark Detection Algorithms: VISCERAL Anatomy Benchmarks.

Jimenez-Del-Toro O, Muller H, Krenn M, Gruenberg K, Taha AA, Winterstein M, Eggel I, Foncubierta-Rodriguez A, Goksel O, Jakab A, Kontokotsios G, Langs G, Menze BH, Salas Fernandez T, Schaer R, Walleyo A, Weber MA, Dicente Cid Y, Gass T, Heinrich M, Jia F, Kahl F, Kechichian R, Mai D, Spanier AB, Vincent G, Wang C, Wyeth D, Hanbury A.

IEEE Trans Med Imaging. 2016 Nov;35(11):2459-2475. Epub 2016 Jun 9.

PMID:
27305669
35.

Isotropic Total Variation Regularization of Displacements in Parametric Image Registration.

Vishnevskiy V, Gass T, Szekely G, Tanner C, Goksel O.

IEEE Trans Med Imaging. 2017 Feb;36(2):385-395. doi: 10.1109/TMI.2016.2610583. Epub 2016 Sep 16.

PMID:
27654322
36.

Required transition from research to clinical application: Report on the 4D treatment planning workshops 2014 and 2015.

Knopf AC, Stützer K, Richter C, Rucinski A, da Silva J, Phillips J, Engelsman M, Shimizu S, Werner R, Jakobi A, Göksel O, Zhang Y, Oshea T, Fast M, Perrin R, Bert C, Rinaldi I, Korevaar E, McClelland J.

Phys Med. 2016 Jul;32(7):874-82. doi: 10.1016/j.ejmp.2016.05.064. Epub 2016 Jun 18.

PMID:
27328991
37.

Prevalence and significance of MEFV gene mutations in patients with sarcoidosis.

Sever F, Kobak S, Goksel Ö, Goksel T, Orman M, Berdeli A.

Scand J Rheumatol. 2016;45(3):215-8. doi: 10.3109/03009742.2015.1092580. Epub 2015 Nov 17.

PMID:
27053370
38.

Scatterer reconstruction and parametrization of homogeneous tissue for ultrasound image simulation.

Mattausch O, Goksel O.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:6350-3. doi: 10.1109/EMBC.2015.7319845.

PMID:
26737745
39.

Compliance boundary conditions for simulating deformations in a limited target region.

Ozkan E, Goksel O.

Conf Proc IEEE Eng Med Biol Soc. 2015 Aug;2015:929-32. doi: 10.1109/EMBC.2015.7318515.

PMID:
26736415
40.

Midterm Results Following Percutaneous Rotational Thrombectomy for Acute Thrombotic Occlusions of Prosthetic Arteriovenous Access Grafts.

Karatepe C, Aldemir M, Çınar B, Önalan A, Işsever H, Goksel OS.

Int Surg. 2015 Jul;100(7-8):1249-54. doi: 10.9738/INTSURG-D-14-00254.1.

PMID:
26595502
41.

Computer algorithms for three-dimensional measurement of humeral anatomy: analysis of 140 paired humeri.

Vlachopoulos L, Dünner C, Gass T, Graf M, Goksel O, Gerber C, Székely G, Fürnstahl P.

J Shoulder Elbow Surg. 2016 Feb;25(2):e38-48. doi: 10.1016/j.jse.2015.07.027. Epub 2015 Oct 4.

PMID:
26440696
42.

Automatic Measurement of Venous Pressure Using B-Mode Ultrasound.

Crimi A, Makhinya M, Baumann U, Thalhammer C, Szekely G, Goksel O.

IEEE Trans Biomed Eng. 2016 Feb;63(2):288-99. doi: 10.1109/TBME.2015.2455953. Epub 2015 Jul 13.

PMID:
26186764
43.

Consistency-based rectification of nonrigid registrations.

Gass T, Székely G, Goksel O.

J Med Imaging (Bellingham). 2015 Jan;2(1):014005. doi: 10.1117/1.JMI.2.1.014005. Epub 2015 Mar 25.

44.

Multiple aortic pseudoaneurysms in a patient with Behçet's disease.

Gok E, Goksel OS, Guven K, Alpagut IU.

J Vasc Surg. 2015 Jul;62(1):231. doi: 10.1016/j.jvs.2014.04.006. No abstract available.

45.

Turkish version of the Drug Hypersensitivity Quality of Life Questionnaire: assessment of reliability and validity.

Bavbek S, Kepil Özdemir S, Doğanay Erdoğan B, Karaboğa I, Büyüköztürk S, Gelincik A, Yılmaz İ, Göksel Ö, Dursun AB, Karakaya G, Kalyoncu AF, Özşeker F, Paşaoğlu Karakış G, Öner Erkekol F, Köycü G, Keren M, Baiardini I, Romano A.

Qual Life Res. 2016 Jan;25(1):101-9. doi: 10.1007/s11136-015-1051-2. Epub 2015 Jun 20.

PMID:
26091583
46.

Biomechanically Constrained Surface Registration: Application to MR-TRUS Fusion for Prostate Interventions.

Khallaghi S, Sánchez CA, Rasoulian A, Sun Y, Imani F, Khojaste A, Goksel O, Romagnoli C, Abdi H, Chang S, Mousavi P, Fenster A, Ward A, Fels S, Abolmaesumi P.

IEEE Trans Med Imaging. 2015 Nov;34(11):2404-14. doi: 10.1109/TMI.2015.2440253. Epub 2015 Jun 3.

PMID:
26054062
47.

Thermal expansion imaging for monitoring lesion depth using M-mode ultrasound during cardiac RF ablation: in vitro study.

Baki P, Sanabria SJ, Kosa G, Szekely G, Goksel O.

Int J Comput Assist Radiol Surg. 2015 Jun;10(6):681-93. doi: 10.1007/s11548-015-1203-4. Epub 2015 Apr 23.

PMID:
25900341
48.

Successful Colchicine Therapy in a Patient With Follicular Bronchiolitis Presumed to Be Asthma.

Goksel O, Nart D, Ergonul AG, Sever F, Goksel T.

Respir Care. 2015 Jul;60(7):e122-4. doi: 10.4187/respcare.03610. Epub 2015 Jan 13.

49.

Debranching solutions in endografting for complex thoracic aortic dissections.

Goksel OS, Guven K, Karatepe C, Gok E, Acunas B, Cinar B, Alpagut U.

Arq Bras Cardiol. 2014 Aug;103(2):154-60. English, Portuguese.

50.

Hypersensitivity to chemotherapeutics: a cross sectional study with 35 desensitisations.

Goksel O, Goksel T, Cok G, Karakus H, Bacakoglu F, Goker E, Uslu R, Erdinc M.

Int J Clin Oncol. 2015 Apr;20(2):395-404. doi: 10.1007/s10147-014-0722-2. Epub 2014 Jul 25.

PMID:
25056643

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