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Items: 5


Automated Computational Inference of Multi-protein Assemblies from Biochemical Co-purification Data.

Goebels F, Hu L, Bader G, Emili A.

Methods Mol Biol. 2018;1764:391-399. doi: 10.1007/978-1-4939-7759-8_25.


A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-κB Signaling.

Malty RH, Aoki H, Kumar A, Phanse S, Amin S, Zhang Q, Minic Z, Goebels F, Musso G, Wu Z, Abou-Tok H, Meyer M, Deineko V, Kassir S, Sidhu V, Jessulat M, Scott NE, Xiong X, Vlasblom J, Prasad B, Foster LJ, Alberio T, Garavaglia B, Yu H, Bader GD, Nakamura K, Parkinson J, Babu M.

Cell Syst. 2017 Dec 27;5(6):564-577.e12. doi: 10.1016/j.cels.2017.10.010. Epub 2017 Nov 8.


Estimation of relative effectiveness of phylogenetic programs by machine learning.

Krivozubov M, Goebels F, Spirin S.

J Bioinform Comput Biol. 2014 Apr;12(2):1441004. doi: 10.1142/S0219720014410042. Epub 2014 Mar 6.


Prediction of protein interaction types based on sequence and network features.

Goebels F, Frishman D.

BMC Syst Biol. 2013;7 Suppl 6:S5. doi: 10.1186/1752-0509-7-S6-S5. Epub 2013 Dec 13.


Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis.

Blohm P, Frishman G, Smialowski P, Goebels F, Wachinger B, Ruepp A, Frishman D.

Nucleic Acids Res. 2014 Jan;42(Database issue):D396-400. doi: 10.1093/nar/gkt1079. Epub 2013 Nov 8.

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