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Items: 45

1.

Complete Genome Sequence of the Diatom-Associated Bacterium Sphingorhabdus sp. Strain SMR4y.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00482-19. doi: 10.1128/MRA.00482-19.

2.

Exploring Molecular Signs of Sex in the Marine Diatom Skeletonema marinoi.

Ferrante MI, Entrambasaguas L, Johansson M, Töpel M, Kremp A, Montresor M, Godhe A.

Genes (Basel). 2019 Jun 28;10(7). pii: E494. doi: 10.3390/genes10070494.

3.

Genome Sequence of Kordia sp. Strain SMS9 Identified in a Non-Axenic Culture of the Diatom Skeletonema marinoi.

Pinder MIM, Johansson ON, Almstedt A, Kourtchenko O, Clarke AK, Godhe A, Töpel M.

J Genomics. 2019 May 9;7:46-49. doi: 10.7150/jgen.35061. eCollection 2019.

4.

Toxic Algae Silence Physiological Responses to Multiple Climate Drivers in a Tropical Marine Food Chain.

Turner LM, Havenhand JN, Alsterberg C, Turner AD, K GS, Rai A, Venugopal MN, Karunasagar I, Godhe A.

Front Physiol. 2019 Apr 4;10:373. doi: 10.3389/fphys.2019.00373. eCollection 2019.

5.

Skeletonema marinoi as a new genetic model for marine chain-forming diatoms.

Johansson ON, Töpel M, Pinder MIM, Kourtchenko O, Blomberg A, Godhe A, Clarke AK.

Sci Rep. 2019 Apr 2;9(1):5391. doi: 10.1038/s41598-019-41085-5.

6.

Microalgae biotechnology in Nordic countries - the potential of local strains.

Cheregi O, Ekendahl S, Engelbrektsson J, Strömberg N, Godhe A, Spetea C.

Physiol Plant. 2019 May;166(1):438-450. doi: 10.1111/ppl.12951. Epub 2019 Mar 25.

PMID:
30809828
7.

Complete Genome Sequence of Novel Sulfitobacter pseudonitzschiae Strain SMR1, Isolated from a Culture of the Marine Diatom Skeletonema marinoi.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Clarke AK, Godhe A.

J Genomics. 2019 Jan 1;7:7-10. doi: 10.7150/jgen.30559. eCollection 2019.

8.

Genome Sequence of Arenibacter algicola Strain SMS7, Found in Association with the Marine Diatom Skeletonema marinoi.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK.

Microbiol Resour Announc. 2019 Jan 10;8(2). pii: e01461-18. doi: 10.1128/MRA.01461-18. eCollection 2019 Jan.

9.

Whole-Genome Sequence of the Novel Antarctobacter heliothermus Strain SMS3, Found in Association with the Marine Diatom Skeletonema marinoi.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK.

J Genomics. 2018 Sep 4;6:113-116. doi: 10.7150/jgen.27637. eCollection 2018.

10.

High single-cell diversity in carbon and nitrogen assimilations by a chain-forming diatom across a century.

Olofsson M, Kourtchenko O, Zetsche EM, Marchant HK, Whitehouse MJ, Godhe A, Ploug H.

Environ Microbiol. 2019 Jan;21(1):142-151. doi: 10.1111/1462-2920.14434. Epub 2018 Oct 30.

PMID:
30277299
11.

Nitrogen uptake potential under different temperature-salinity conditions: Implications for nitrogen cycling under climate change scenarios.

Kumar S, Bhavya PS, Ramesh R, Gupta GVM, Chiriboga F, Singh A, Karunasagar I, Rai A, Rehnstam-Holm AS, Edler L, Godhe A.

Mar Environ Res. 2018 Oct;141:196-204. doi: 10.1016/j.marenvres.2018.09.001. Epub 2018 Sep 4.

PMID:
30213661
12.

The anchoring effect-long-term dormancy and genetic population structure.

Sundqvist L, Godhe A, Jonsson PR, Sefbom J.

ISME J. 2018 Dec;12(12):2929-2941. doi: 10.1038/s41396-018-0216-8. Epub 2018 Aug 1.

PMID:
30068937
13.

Growth of a common planktonic diatom quantified using solid medium culturing.

Kourtchenko O, Rajala T, Godhe A.

Sci Rep. 2018 Jun 27;8(1):9757. doi: 10.1038/s41598-018-28129-y.

14.

A planktonic diatom displays genetic structure over small spatial scales.

Sefbom J, Kremp A, Rengefors K, Jonsson PR, Sjöqvist C, Godhe A.

Environ Microbiol. 2018 Aug;20(8):2783-2795. doi: 10.1111/1462-2920.14117. Epub 2018 Apr 23.

PMID:
29614214
15.

Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi.

Amato A, Sabatino V, Nylund GM, Bergkvist J, Basu S, Andersson MX, Sanges R, Godhe A, Kiørboe T, Selander E, Ferrante MI.

ISME J. 2018 Jun;12(6):1594-1604. doi: 10.1038/s41396-018-0094-0. Epub 2018 Mar 29.

16.

Complete Genome Sequence of Loktanella vestfoldensis Strain SMR4r, a Novel Strain Isolated from a Culture of the Chain-Forming Diatom Skeletonema marinoi.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK.

Genome Announc. 2018 Mar 22;6(12). pii: e01558-17. doi: 10.1128/genomeA.01558-17.

17.
18.

Assessing the presence of marine toxins in bivalve molluscs from southwest India.

Turner AD, Dhanji-Rapkova M, Rowland-Pilgrim S, Turner LM, Rai A, Venugopal MN, Karunasagar I, Godhe A.

Toxicon. 2017 Dec 15;140:147-156. doi: 10.1016/j.toxicon.2017.11.001. Epub 2017 Nov 3.

PMID:
29109054
19.

The role of intraspecific variation in the ecological and evolutionary success of diatoms in changing environments.

Godhe A, Rynearson T.

Philos Trans R Soc Lond B Biol Sci. 2017 Sep 5;372(1728). pii: 20160399. doi: 10.1098/rstb.2016.0399. Review.

20.

Genome Sequence of Roseovarius mucosus Strain SMR3, Isolated from a Culture of the Diatom Skeletonema marinoi.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK.

Genome Announc. 2017 Jun 1;5(22). pii: e00394-17. doi: 10.1128/genomeA.00394-17.

21.

Exploring the impact of multidecadal environmental changes on the population genetic structure of a marine primary producer.

Lundholm N, Ribeiro S, Godhe A, Rostgaard Nielsen L, Ellegaard M.

Ecol Evol. 2017 Mar 30;7(9):3132-3142. doi: 10.1002/ece3.2906. eCollection 2017 May.

22.

The effect of exogenous β-N-methylamino-l-alanine (BMAA) on the diatoms Phaeodactylum tricornutum and Thalassiosira weissflogii.

Lage S, Ström L, Godhe A, Rydberg S.

Harmful Algae. 2016 Sep;58:85-92. doi: 10.1016/j.hal.2016.08.005. Epub 2016 Sep 5.

PMID:
28073463
23.

Challenges for the Maintenance and Cryopreservation of Multiple Isolates of Model Microorganisms: An Example Using the Marine Diatom Skeletonema marinoi.

Day JG, Tytor S, Egardt J, Applegren M, Rad-Menéndez C, Chepurnova O, Vyverman W, Godhe A.

Biopreserv Biobank. 2017 Jun;15(3):191-202. doi: 10.1089/bio.2016.0026. Epub 2016 Nov 29.

PMID:
27898247
24.

Pathogenic marine microbes influence the effects of climate change on a commercially important tropical bivalve.

Turner LM, Alsterberg C, Turner AD, Girisha SK, Rai A, Havenhand JN, Venugopal MN, Karunasagar I, Godhe A.

Sci Rep. 2016 Aug 31;6:32413. doi: 10.1038/srep32413.

25.

DNA Extraction Protocols for Whole-Genome Sequencing in Marine Organisms.

Panova M, Aronsson H, Cameron RA, Dahl P, Godhe A, Lind U, Ortega-Martinez O, Pereyra R, Tesson SV, Wrange AL, Blomberg A, Johannesson K.

Methods Mol Biol. 2016;1452:13-44. doi: 10.1007/978-1-4939-3774-5_2.

PMID:
27460368
26.

Competitive advantage and higher fitness in native populations of genetically structured planktonic diatoms.

Sildever S, Sefbom J, Lips I, Godhe A.

Environ Microbiol. 2016 Dec;18(12):4403-4411. doi: 10.1111/1462-2920.13372. Epub 2016 Jun 27.

PMID:
27207672
27.

Spatio-Temporal Interdependence of Bacteria and Phytoplankton during a Baltic Sea Spring Bloom.

Bunse C, Bertos-Fortis M, Sassenhagen I, Sildever S, Sjöqvist C, Godhe A, Gross S, Kremp A, Lips I, Lundholm N, Rengefors K, Sefbom J, Pinhassi J, Legrand C.

Front Microbiol. 2016 Apr 21;7:517. doi: 10.3389/fmicb.2016.00517. eCollection 2016.

28.

Germination and colonization success of Gonyostomum semen (Raphidophyceae) cysts after dispersal to new habitats.

Sassenhagen I, Sefbom J, Godhe A, Rengefors K.

J Plankton Res. 2015 Sep;37(5):857-861. Epub 2015 Aug 19.

29.

BMAA extraction of cyanobacteria samples: which method to choose?

Lage S, Burian A, Rasmussen U, Costa PR, Annadotter H, Godhe A, Rydberg S.

Environ Sci Pollut Res Int. 2016 Jan;23(1):338-50. doi: 10.1007/s11356-015-5266-0. Epub 2015 Aug 26.

PMID:
26304815
30.

Freshwater protists do not go with the flow: population structure in Gonyostomum semen independent of connectivity among lakes.

Sassenhagen I, Sefbom J, Säll T, Godhe A, Rengefors K.

Environ Microbiol. 2015 Dec;17(12):5063-72. doi: 10.1111/1462-2920.12987. Epub 2015 Aug 11.

PMID:
26184488
31.

Priority effects in a planktonic bloom-forming marine diatom.

Sefbom J, Sassenhagen I, Rengefors K, Godhe A.

Biol Lett. 2015 May;11(5):20150184. doi: 10.1098/rsbl.2015.0184.

32.

Local adaptation and oceanographic connectivity patterns explain genetic differentiation of a marine diatom across the North Sea-Baltic Sea salinity gradient.

Sjöqvist C, Godhe A, Jonsson PR, Sundqvist L, Kremp A.

Mol Ecol. 2015 Jun;24(11):2871-85. doi: 10.1111/mec.13208.

33.

Genetic and microscopic evidence for sexual reproduction in the centric diatom Skeletonema marinoi.

Godhe A, Kremp A, Montresor M.

Protist. 2014 Aug;165(4):401-16. doi: 10.1016/j.protis.2014.04.006. Epub 2014 May 9.

PMID:
24907651
34.

Effects of grazer presence on genetic structure of a phenotypically diverse diatom population.

Sjöqvist C, Kremp A, Lindehoff E, Båmstedt U, Egardt J, Gross S, Jönsson M, Larsson H, Pohnert G, Richter H, Selander E, Godhe A.

Microb Ecol. 2014 Jan;67(1):83-95. doi: 10.1007/s00248-013-0327-8. Epub 2013 Nov 23.

PMID:
24272280
35.

Seascape analysis reveals regional gene flow patterns among populations of a marine planktonic diatom.

Godhe A, Egardt J, Kleinhans D, Sundqvist L, Hordoir R, Jonsson PR.

Proc Biol Sci. 2013 Oct 30;280(1773):20131599. doi: 10.1098/rspb.2013.1599. Print 2013 Dec 22.

36.

Defining the niche of Vibrio parahaemolyticus during pre- and post-monsoon seasons in the coastal Arabian Sea.

Rehnstam-Holm AS, Atnur V, Godhe A.

Microb Ecol. 2014 Jan;67(1):57-65. doi: 10.1007/s00248-013-0311-3. Epub 2013 Oct 26.

PMID:
24158690
37.

Genetic diversity and ecosystem functioning in the face of multiple stressors.

Roger F, Godhe A, Gamfeldt L.

PLoS One. 2012;7(9):e45007. doi: 10.1371/journal.pone.0045007. Epub 2012 Sep 18.

38.

Intraspecific variability in the response of bloom-forming marine microalgae to changed climate conditions.

Kremp A, Godhe A, Egardt J, Dupont S, Suikkanen S, Casabianca S, Penna A.

Ecol Evol. 2012 Jun;2(6):1195-207. doi: 10.1002/ece3.245.

39.

Water column dynamics of Vibrio in relation to phytoplankton community composition and environmental conditions in a tropical coastal area.

Asplund ME, Rehnstam-Holm AS, Atnur V, Raghunath P, Saravanan V, Härnström K, Collin B, Karunasagar I, Godhe A.

Environ Microbiol. 2011 Oct;13(10):2738-51. doi: 10.1111/j.1462-2920.2011.02545.x. Epub 2011 Sep 5.

PMID:
21895909
40.

Hundred years of genetic structure in a sediment revived diatom population.

Härnström K, Ellegaard M, Andersen TJ, Godhe A.

Proc Natl Acad Sci U S A. 2011 Mar 8;108(10):4252-7. doi: 10.1073/pnas.1013528108. Epub 2011 Jan 31.

41.

Linking the planktonic and benthic habitat: genetic structure of the marine diatom Skeletonema marinoi.

Godhe A, Härnström K.

Mol Ecol. 2010 Oct;19(20):4478-90. doi: 10.1111/j.1365-294X.2010.04841.x. Epub 2010 Sep 28.

PMID:
20875064
42.

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 May 2009-31 July 2009.

Molecular Ecology Resources Primer Development Consortium, Almany GR, DE Arruda MP, Arthofer W, Atallah ZK, Beissinger SR, Berumen ML, Bogdanowicz SM, Brown SD, Bruford MW, Burdine C, Busch JW, Campbell NR, Carey D, Carstens BC, Chu KH, Cubeta MA, Cuda JP, Cui Z, Datnoff LE, Dávila JA, Davis ES, Davis RM, Diekmann OE, Eizirik E, Fargallo JA, Fernandes F, Fukuda H, Gale LR, Gallagher E, Gao Y, Girard P, Godhe A, Gonçalves EC, Gouveia L, Grajczyk AM, Grose MJ, Gu Z, Halldén C, Härnström K, Hemmingsen AH, Holmes G, Huang CH, Huang CC, Hudman SP, Jones GP, Kanetis L, Karunasagar I, Karunasagar I, Keyghobadi N, Klosterman SJ, Klug PE, Koch J, Koopman MM, Köppler K, Koshimizu E, Krumböck S, Kubisiak T, Landis JB, Lasta ML, Lee CY, Li Q, Li SH, Lin RC, Liu M, Liu N, Liu WC, Liu Y, Loiseau A, Luan W, Maruthachalam KK, McCormick HM, Mellick R, Monnahan PJ, Morielle-Versute E, Murray TE, Narum SR, Neufeld K, De Nova PJ, Ojiambo PS, Okamoto N, Othman AS, Overholt WA, Pardini R, Paterson IG, Patty OA, Paxton RJ, Planes S, Porter C, Pratchett MS, Püttker T, Rasic G, Rasool B, Rey O, Riegler M, Riehl C, Roberts JM, Roberts PD, Rochel E, Roe KJ, Rossetto M, Ruzzante DE, Sakamoto T, Saravanan V, Sarturi CR, Schmidt A, Schneider MP, Schuler H, Serb JM, Serrão ET, Shi Y, Silva A, Sin YW, Sommer S, Stauffer C, Strüssmann CA, Subbarao KV, Syms C, Tan F, Tejedor ED, Thorrold SR, Trigiano RN, Trucco MI, Tsuchiya-Jerep MT, Vergara P, Van De Vliet MS, Wadl PA, Wang A, Wang H, Wang RX, Wang X, Wang Y, Weeks AR, Wei F, Werner WJ, Wiley EO, Williams DA, Wilkins RJ, Wisely SM, With KA, Wu D, Yao CT, Yau C, Yeap BK, Zhai BP, Zhan X, Zhang GY, Zhang SY, Zhao R, Zhu L.

Mol Ecol Resour. 2009 Nov;9(6):1460-6. doi: 10.1111/j.1755-0998.2009.02759.x. Epub 2009 Sep 29.

PMID:
21564933
43.

SEASONAL VARIABILITY IN POLYUNSATURATED ALDEHYDE PRODUCTION POTENTIAL AMONG STRAINS OF SKELETONEMA MARINOI (BACILLARIOPHYCEAE)(1).

Taylor RL, Abrahamsson K, Godhe A, Wängberg SÅ.

J Phycol. 2009 Feb;45(1):46-53. doi: 10.1111/j.1529-8817.2008.00625.x. Epub 2009 Feb 3.

PMID:
27033644
44.

Quantification of diatom and dinoflagellate biomasses in coastal marine seawater samples by real-time PCR.

Godhe A, Asplund ME, Härnström K, Saravanan V, Tyagi A, Karunasagar I.

Appl Environ Microbiol. 2008 Dec;74(23):7174-82. doi: 10.1128/AEM.01298-08. Epub 2008 Oct 10.

45.

Polymerase chain reaction in detection of Gymnodinium mikimotoi and Alexandrium minutum in field samples from southwest India.

Godhe A, Otta SK, Rehnstam-Holm AS, Karunasagar I, Karunasagar I.

Mar Biotechnol (NY). 2001 Mar;3(2):152-62.

PMID:
14961378

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