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Items: 1 to 50 of 178

1.

Regional biogeography of microbiota composition in the Chagas disease vector Rhodnius pallescens.

Kieran TJ, Arnold KMH, Thomas JC 4th, Varian CP, Saldaña A, Calzada JE, Glenn TC, Gottdenker NL.

Parasit Vectors. 2019 Oct 29;12(1):504. doi: 10.1186/s13071-019-3761-8.

2.

Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix).

Glenn TC, Pierson TW, Bayona-Vásquez NJ, Kieran TJ, Hoffberg SL, Thomas Iv JC, Lefever DE, Finger JW, Gao B, Bian X, Louha S, Kolli RT, Bentley KE, Rushmore J, Wong K, Shaw TI, Rothrock MJ Jr, McKee AM, Guo TL, Mauricio R, Molina M, Cummings BS, Lash LH, Lu K, Gilbert GS, Hubbell SP, Faircloth BC.

PeerJ. 2019 Oct 11;7:e7786. doi: 10.7717/peerj.7786. eCollection 2019.

3.

Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext).

Glenn TC, Nilsen RA, Kieran TJ, Sanders JG, Bayona-Vásquez NJ, Finger JW, Pierson TW, Bentley KE, Hoffberg SL, Louha S, Garcia-De Leon FJ, Del Rio Portilla MA, Reed KD, Anderson JL, Meece JK, Aggrey SE, Rekaya R, Alabady M, Belanger M, Winker K, Faircloth BC.

PeerJ. 2019 Oct 11;7:e7755. doi: 10.7717/peerj.7755. eCollection 2019.

4.

Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD).

Bayona-Vásquez NJ, Glenn TC, Kieran TJ, Pierson TW, Hoffberg SL, Scott PA, Bentley KE, Finger JW, Louha S, Troendle N, Diaz-Jaimes P, Mauricio R, Faircloth BC.

PeerJ. 2019 Oct 11;7:e7724. doi: 10.7717/peerj.7724. eCollection 2019.

5.

Genomic mutations after multigenerational exposure of Caenorhabditis elegans to pristine and sulfidized silver nanoparticles.

Wamucho A, Unrine JM, Kieran TJ, Glenn TC, Schultz CL, Farman M, Svendsen C, Spurgeon DJ, Tsyusko OV.

Environ Pollut. 2019 Nov;254(Pt B):113078. doi: 10.1016/j.envpol.2019.113078. Epub 2019 Aug 24.

PMID:
31479814
6.

Analysis of the Rumen Microbiota of Beef Calves Supplemented During the Suckling Phase.

Lourenco JM, Callaway TR, Kieran TJ, Glenn TC, McCann JC, Stewart RL Jr.

Front Microbiol. 2019 May 28;10:1131. doi: 10.3389/fmicb.2019.01131. eCollection 2019.

7.

Generalist host species drive Trypanosoma cruzi vector infection in oil palm plantations in the Orinoco region, Colombia.

Erazo D, Gottdenker NL, González C, Guhl F, Cuellar M, Kieran TJ, Glenn TC, Umaña JD, Cordovez J.

Parasit Vectors. 2019 May 28;12(1):274. doi: 10.1186/s13071-019-3519-3.

8.

Examining the Effects of Chronic Selenium Exposure on Traditionally Used Stress Parameters in Juvenile American Alligators (Alligator mississippiensis).

Finger JW Jr, Hamilton MT, Kelley MD, Stacy NI, Glenn TC, Tuberville TD.

Arch Environ Contam Toxicol. 2019 Jul;77(1):14-21. doi: 10.1007/s00244-019-00626-9. Epub 2019 Apr 11.

PMID:
30976886
9.

Earth history and the passerine superradiation.

Oliveros CH, Field DJ, Ksepka DT, Barker FK, Aleixo A, Andersen MJ, Alström P, Benz BW, Braun EL, Braun MJ, Bravo GA, Brumfield RT, Chesser RT, Claramunt S, Cracraft J, Cuervo AM, Derryberry EP, Glenn TC, Harvey MG, Hosner PA, Joseph L, Kimball RT, Mack AL, Miskelly CM, Peterson AT, Robbins MB, Sheldon FH, Silveira LF, Smith BT, White ND, Moyle RG, Faircloth BC.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7916-7925. doi: 10.1073/pnas.1813206116. Epub 2019 Apr 1.

10.

Bromate-induced Changes in p21 DNA Methylation and Histone Acetylation in Renal Cells.

Kolli RT, Glenn TC, Brown BT, Kaur SP, Barnett LM, Lash LH, Cummings BS.

Toxicol Sci. 2019 Apr 1;168(2):460-473. doi: 10.1093/toxsci/kfz016.

PMID:
30649504
11.

Formation of a recent hybrid zone offers insight into the geographic puzzle and maintenance of species boundaries in musk turtles.

Scott PA, Glenn TC, Rissler LJ.

Mol Ecol. 2019 Feb;28(4):761-771. doi: 10.1111/mec.14983. Epub 2019 Feb 6.

PMID:
30578692
12.

Insight from an ultraconserved element bait set designed for hemipteran phylogenetics integrated with genomic resources.

Kieran TJ, Gordon ERL, Forthman M, Hoey-Chamberlain R, Kimball RT, Faircloth BC, Weirauch C, Glenn TC.

Mol Phylogenet Evol. 2019 Jan;130:297-303. doi: 10.1016/j.ympev.2018.10.026. Epub 2018 Oct 22.

PMID:
30359745
13.

Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event.

Winker K, Glenn TC, Faircloth BC.

PeerJ. 2018 Oct 5;6:e5735. doi: 10.7717/peerj.5735. eCollection 2018.

14.

Isolation and characterization of microsatellite markers for conservation management of the endangered Great-billed Seed-finch, Sporophila maximiliani (Aves, Passeriformes), and cross-amplification in other congeners.

Medolago CAB, Costa MC, Ubaid FK, Glenn TC, Silveira LF, Francisco MR.

Mol Biol Rep. 2018 Dec;45(6):2815-2819. doi: 10.1007/s11033-018-4377-3. Epub 2018 Sep 19.

PMID:
30232780
15.

Novel Metabolomic Comparison of Arterial and Jugular Venous Blood in Severe Adult Traumatic Brain Injury Patients and the Impact of Pentobarbital Infusion.

Wolahan SM, Lebby E, Mao HC, McArthur D, Real C, Vespa P, Braas D, Glenn TC.

J Neurotrauma. 2019 Jan 15;36(2):212-221. doi: 10.1089/neu.2018.5674. Epub 2018 Aug 13.

PMID:
29901425
16.

Dietary Selenomethionine Administration and Its Effects on the American Alligator (Alligator mississippiensis): Oxidative Status and Corticosterone Levels.

Finger JW Jr, Hamilton MT, Kelley MD, Zhang Y, Kavazis AN, Glenn TC, Tuberville TD.

Arch Environ Contam Toxicol. 2018 Jul;75(1):37-44. doi: 10.1007/s00244-018-0530-1. Epub 2018 May 8.

PMID:
29737374
17.

A High-Quality Reference Genome for the Invasive Mosquitofish Gambusia affinis Using a Chicago Library.

Hoffberg SL, Troendle NJ, Glenn TC, Mahmud O, Louha S, Chalopin D, Bennetzen JL, Mauricio R.

G3 (Bethesda). 2018 May 31;8(6):1855-1861. doi: 10.1534/g3.118.200101.

18.

Long-term treatment with green tea polyphenols modifies the gut microbiome of female sprague-dawley rats.

Wang J, Tang L, Zhou H, Zhou J, Glenn TC, Shen CL, Wang JS.

J Nutr Biochem. 2018 Jun;56:55-64. doi: 10.1016/j.jnutbio.2018.01.005. Epub 2018 Jan 31.

19.

Resolving taxonomic turbulence and uncovering cryptic diversity in the musk turtles (Sternotherus) using robust demographic modeling.

Scott PA, Glenn TC, Rissler LJ.

Mol Phylogenet Evol. 2018 Mar;120:1-15. doi: 10.1016/j.ympev.2017.11.008. Epub 2017 Nov 20.

PMID:
29158032
20.

Blood Meal Source Characterization Using Illumina Sequencing in the Chagas Disease Vector Rhodnius pallescens (Hemiptera: Reduviidae) in Panamá.

Kieran TJ, Gottdenker NL, Varian CP, Saldaña A, Means N, Owens D, Calzada JE, Glenn TC.

J Med Entomol. 2017 Nov 7;54(6):1786-1789. doi: 10.1093/jme/tjx170.

PMID:
29029145
21.

Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats.

Platt RN 2nd, Faircloth BC, Sullivan KAM, Kieran TJ, Glenn TC, Vandewege MW, Lee TE Jr, Baker RJ, Stevens RD, Ray DA.

Syst Biol. 2018 Mar 1;67(2):236-249. doi: 10.1093/sysbio/syx070.

22.

Habitat predictors of genetic diversity for two sympatric wetland-breeding amphibian species.

McKee AM, Maerz JC, Smith LL, Glenn TC.

Ecol Evol. 2017 Jul 3;7(16):6271-6283. doi: 10.1002/ece3.3203. eCollection 2017 Aug.

23.

New astroglial injury-defined biomarkers for neurotrauma assessment.

Halford J, Shen S, Itamura K, Levine J, Chong AC, Czerwieniec G, Glenn TC, Hovda DA, Vespa P, Bullock R, Dietrich WD, Mondello S, Loo JA, Wanner IB.

J Cereb Blood Flow Metab. 2017 Oct;37(10):3278-3299. doi: 10.1177/0271678X17724681. Epub 2017 Aug 17.

24.

Acute glucose and lactate metabolism are associated with cognitive recovery following traumatic brain injury.

Mannino C, Glenn TC, Hovda DA, Vespa PM, McArthur DL, Van Horn JD, Wright MJ.

J Neurosci Res. 2018 Apr;96(4):696-701. doi: 10.1002/jnr.24097. Epub 2017 Jun 13.

25.

Lactate supplementation in severe traumatic brain injured adults by primed constant infusion of sodium L-lactate.

Wolahan SM, Mao HC, Real C, Vespa PM, Glenn TC.

J Neurosci Res. 2018 Apr;96(4):688-695. doi: 10.1002/jnr.24085. Epub 2017 May 20.

26.

Genistein prevention of hyperglycemia and improvement of glucose tolerance in adult non-obese diabetic mice are associated with alterations of gut microbiome and immune homeostasis.

Huang G, Xu J, Lefever DE, Glenn TC, Nagy T, Guo TL.

Toxicol Appl Pharmacol. 2017 Oct 1;332:138-148. doi: 10.1016/j.taap.2017.04.009. Epub 2017 Apr 12.

27.

Screening wild and semi-free ranging great apes for putative sexually transmitted diseases: Evidence of Trichomonadidae infections.

Rushmore J, Allison AB, Edwards EE, Bagal U, Altizer S, Cranfield MR, Glenn TC, Liu H, Mudakikwa A, Mugisha L, Muller MN, Stumpf RM, Thompson ME, Wrangham R, Yabsley MJ.

Am J Primatol. 2017 Apr;79(4):1-2. doi: 10.1002/ajp.22645. Epub 2017 Feb 15. No abstract available.

PMID:
28324622
28.

Dietary Selenomethionine Administration in the American Alligator (Alligator mississippiensis): Hepatic and Renal Se Accumulation and Its Effects on Growth and Body Condition.

Finger JW Jr, Hamilton MT, Glenn TC, Tuberville TD.

Arch Environ Contam Toxicol. 2017 Apr;72(3):439-448. doi: 10.1007/s00244-017-0370-4. Epub 2017 Feb 1.

PMID:
28150020
29.

Use of sonic tomography to detect and quantify wood decay in living trees.

Gilbert GS, Ballesteros JO, Barrios-Rodriguez CA, Bonadies EF, Cedeño-Sánchez ML, Fossatti-Caballero NJ, Trejos-Rodríguez MM, Pérez-Suñiga JM, Holub-Young KS, Henn LA, Thompson JB, García-López CG, Romo AC, Johnston DC, Barrick PP, Jordan FA, Hershcovich S, Russo N, Sánchez JD, Fábrega JP, Lumpkin R, McWilliams HA, Chester KN, Burgos AC, Wong EB, Diab JH, Renteria SA, Harrower JT, Hooton DA, Glenn TC, Faircloth BC, Hubbell SP.

Appl Plant Sci. 2016 Dec 16;4(12). pii: apps.1600060. doi: 10.3732/apps.1600060. eCollection 2016 Dec.

30.

Influence of Glycemic Control on Endogenous Circulating Ketone Concentrations in Adults Following Traumatic Brain Injury.

Wolahan SM, Prins ML, McArthur DL, Real CR, Hovda DA, Martin NA, Vespa PM, Glenn TC.

Neurocrit Care. 2017 Apr;26(2):239-246. doi: 10.1007/s12028-016-0313-3.

31.

A semi-automated workflow solution for multimodal neuroimaging: application to patients with traumatic brain injury.

Wong KP, Bergsneider M, Glenn TC, Kepe V, Barrio JR, Hovda DA, Vespa PM, Huang SC.

Brain Inform. 2016 Mar;3(1):1-15. Epub 2015 Dec 1.

32.

Role of Metabolomics in Traumatic Brain Injury Research.

Wolahan SM, Hirt D, Braas D, Glenn TC.

Neurosurg Clin N Am. 2016 Oct;27(4):465-72. doi: 10.1016/j.nec.2016.05.006. Epub 2016 Aug 10. Review.

33.

Nephrotoxicity of epigenetic inhibitors used for the treatment of cancer.

Scholpa NE, Kolli RT, Moore M, Arnold RD, Glenn TC, Cummings BS.

Chem Biol Interact. 2016 Oct 25;258:21-9. doi: 10.1016/j.cbi.2016.08.010. Epub 2016 Aug 16.

34.

Chronic Ingestion of Coal Fly-Ash Contaminated Prey and Its Effects on Health and Immune Parameters in Juvenile American Alligators (Alligator mississippiensis).

Finger JW Jr, Hamilton MT, Metts BS, Glenn TC, Tuberville TD.

Arch Environ Contam Toxicol. 2016 Oct;71(3):347-58. doi: 10.1007/s00244-016-0301-9. Epub 2016 Jul 30.

PMID:
27475646
35.

Capturing Darwin's dream.

Glenn TC, Faircloth BC.

Mol Ecol Resour. 2016 Sep;16(5):1051-8. doi: 10.1111/1755-0998.12574.

36.

Assessing the microbiomes of scalder and chiller tank waters throughout a typical commercial poultry processing day.

Rothrock MJ Jr, Locatelli A, Glenn TC, Thomas JC, Caudill AC, Kiepper BH, Hiett KL.

Poult Sci. 2016 Oct 1;95(10):2372-82. doi: 10.3382/ps/pew234. Epub 2016 Jul 21.

PMID:
27444443
37.

RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data.

Hoffberg SL, Kieran TJ, Catchen JM, Devault A, Faircloth BC, Mauricio R, Glenn TC.

Mol Ecol Resour. 2016 Sep;16(5):1264-78. doi: 10.1111/1755-0998.12566.

PMID:
27416967
38.

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics.

Harvey MG, Smith BT, Glenn TC, Faircloth BC, Brumfield RT.

Syst Biol. 2016 Sep;65(5):910-24. doi: 10.1093/sysbio/syw036. Epub 2016 Jun 10. Review.

PMID:
27288477
39.

Rapid Microbiome Changes in Freshly Deposited Cow Feces under Field Conditions.

Wong K, Shaw TI, Oladeinde A, Glenn TC, Oakley B, Molina M.

Front Microbiol. 2016 Apr 13;7:500. doi: 10.3389/fmicb.2016.00500. eCollection 2016.

40.

A semi-automated workflow solution for multimodal neuroimaging: application to patients with traumatic brain injury.

Wong KP, Bergsneider M, Glenn TC, Kepe V, Barrio JR, Hovda DA, Vespa PM, Huang SC.

Brain Inform. 2016;3:1-15. Epub 2015 Dec 1.

41.

Analysis of a Rapid Evolutionary Radiation Using Ultraconserved Elements: Evidence for a Bias in Some Multispecies Coalescent Methods.

Meiklejohn KA, Faircloth BC, Glenn TC, Kimball RT, Braun EL.

Syst Biol. 2016 Jul;65(4):612-27. doi: 10.1093/sysbio/syw014. Epub 2016 Feb 10.

PMID:
26865273
42.

Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes).

Hosner PA, Faircloth BC, Glenn TC, Braun EL, Kimball RT.

Mol Biol Evol. 2016 Apr;33(4):1110-25. doi: 10.1093/molbev/msv347. Epub 2015 Dec 29.

PMID:
26715628
43.

Ketogenic diet decreases oxidative stress and improves mitochondrial respiratory complex activity.

Greco T, Glenn TC, Hovda DA, Prins ML.

J Cereb Blood Flow Metab. 2016 Sep;36(9):1603-13. doi: 10.1177/0271678X15610584. Epub 2015 Oct 13.

44.

Aflatoxin B1 Induced Compositional Changes in Gut Microbial Communities of Male F344 Rats.

Wang J, Tang L, Glenn TC, Wang JS.

Toxicol Sci. 2016 Mar;150(1):54-63. doi: 10.1093/toxsci/kfv259. Epub 2015 Nov 25.

45.

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics.

Edwards SV, Xi Z, Janke A, Faircloth BC, McCormack JE, Glenn TC, Zhong B, Wu S, Lemmon EM, Lemmon AR, Leaché AD, Liu L, Davis CC.

Mol Phylogenet Evol. 2016 Jan;94(Pt A):447-62. doi: 10.1016/j.ympev.2015.10.027. Epub 2015 Oct 27. Review.

46.

Translational Metabolomics of Head Injury: Exploring Dysfunctional Cerebral Metabolism with Ex Vivo NMR Spectroscopy-Based Metabolite Quantification.

Wolahan SM, Hirt D, Glenn TC.

In: Kobeissy FH, editor. Brain Neurotrauma: Molecular, Neuropsychological, and Rehabilitation Aspects. Boca Raton (FL): CRC Press/Taylor & Francis; 2015. Chapter 25.

47.

Screening wild and semi-free ranging great apes for putative sexually transmitted diseases: Evidence of Trichomonadidae infections.

Rushmore J, Allison AB, Edwards EE, Bagal U, Altizer S, Cranfield MR, Glenn TC, Liu H, Mudakikwa A, Mugisha L, Muller MN, Stumpf RM, Thompson ME, Wrangham R, Yabsley MJ.

Am J Primatol. 2015 Oct;77(10):1075-85. doi: 10.1002/ajp.22442. Epub 2015 Jun 26. Erratum in: Am J Primatol. 2017 Apr;79(4):1-2.

PMID:
26119266
48.

Eleven microsatellites in an emerging invader, Phytolacca americana (Phytolaccaceae), from its native and introduced ranges.

Bentley KE, Berryman KR, Hopper M, Hoffberg SL, Myhre KE, Iwao K, Lee JB, Glenn TC, Mauricio R.

Appl Plant Sci. 2015 Mar 9;3(3). pii: apps.1500002. doi: 10.3732/apps.1500002. eCollection 2015 Mar.

49.

Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq).

Graham CF, Glenn TC, McArthur AG, Boreham DR, Kieran T, Lance S, Manzon RG, Martino JA, Pierson T, Rogers SM, Wilson JY, Somers CM.

Mol Ecol Resour. 2015 Nov;15(6):1304-15. doi: 10.1111/1755-0998.12404. Epub 2015 Apr 1.

PMID:
25783180
50.

Resolving phylogenetic relationships of the recently radiated carnivorous plant genus Sarracenia using target enrichment.

Stephens JD, Rogers WL, Heyduk K, Cruse-Sanders JM, Determann RO, Glenn TC, Malmberg RL.

Mol Phylogenet Evol. 2015 Apr;85:76-87. doi: 10.1016/j.ympev.2015.01.015. Epub 2015 Feb 14.

PMID:
25689607

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