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Items: 1 to 50 of 327

1.

Regulation of decellularized tissue remodeling via scaffold-mediated lentiviral delivery in anatomically-shaped osteochondral constructs.

Rowland CR, Glass KA, Ettyreddy AR, Gloss CC, Matthews JRL, Huynh NPT, Guilak F.

Biomaterials. 2018 Sep;177:161-175. doi: 10.1016/j.biomaterials.2018.04.049. Epub 2018 May 30.

PMID:
29894913
2.

Influence of caudal epidural analgesia on cortisol concentrations and pain-related behavioral responses in mares during and after ovariectomy via colpotomy.

Rowland AL, Glass KG, Grady ST, Cummings KJ, Hinrichs K, Watts AE.

Vet Surg. 2018 May 18. doi: 10.1111/vsu.12908. [Epub ahead of print]

PMID:
29774961
3.

Low Pathogenic Avian Influenza Exposure Risk Assessment in Australian Commercial Chicken Farms.

Scott AB, Toribio JA, Singh M, Groves P, Barnes B, Glass K, Moloney B, Black A, Hernandez-Jover M.

Front Vet Sci. 2018 Apr 26;5:68. doi: 10.3389/fvets.2018.00068. eCollection 2018.

4.

Low- and High-Pathogenic Avian Influenza H5 and H7 Spread Risk Assessment Within and Between Australian Commercial Chicken Farms.

Scott AB, Toribio JLML, Singh M, Groves P, Barnes B, Glass K, Moloney B, Black A, Hernandez-Jover M.

Front Vet Sci. 2018 Apr 9;5:63. doi: 10.3389/fvets.2018.00063. eCollection 2018.

5.

Biosecurity practices on Australian commercial layer and meat chicken farms: Performance and perceptions of farmers.

Scott AB, Singh M, Groves P, Hernandez-Jover M, Barnes B, Glass K, Moloney B, Black A, Toribio JA.

PLoS One. 2018 Apr 18;13(4):e0195582. doi: 10.1371/journal.pone.0195582. eCollection 2018.

6.

Seven Salmonella Typhimurium Outbreaks in Australia Linked by Trace-Back and Whole Genome Sequencing.

Ford L, Wang Q, Stafford R, Ressler KA, Norton S, Shadbolt C, Hope K, Franklin N, Krsteski R, Carswell A, Carter GP, Seemann T, Howard P, Valcanis M, Castillo CFS, Bates J, Glass K, Williamson DA, Sintchenko V, Howden BP, Kirk MD.

Foodborne Pathog Dis. 2018 May;15(5):285-292. doi: 10.1089/fpd.2017.2353. Epub 2018 Mar 20.

PMID:
29638170
7.

Health Outcomes from Multidrug-Resistant Salmonella Infections in High-Income Countries: A Systematic Review and Meta-Analysis.

Parisi A, Crump JA, Glass K, Howden BP, Furuya-Kanamori L, Vilkins S, Gray DJ, Kirk MD.

Foodborne Pathog Dis. 2018 Jul;15(7):428-436. doi: 10.1089/fpd.2017.2403. Epub 2018 Apr 6.

PMID:
29624414
8.

Modelling low pathogenic avian influenza introduction into the commercial poultry industry.

Barnes B, Glass K.

Math Biosci. 2018 Jun;300:115-121. doi: 10.1016/j.mbs.2018.03.021. Epub 2018 Mar 23.

PMID:
29580852
9.

Sediment exchange to mitigate pollutant exposure in urban soil.

Walsh D, Glass K, Morris S, Zhang H, McRae I, Anderson N, Alfieri A, Egendorf SP, Holberton S, Owrang S, Cheng Z.

J Environ Manage. 2018 May 15;214:354-361. doi: 10.1016/j.jenvman.2018.03.013. Epub 2018 Mar 11.

PMID:
29533833
10.

Correction: Comparisons of management practices and farm design on Australian commercial layer and meat chicken farms: Cage, barn and free range.

Scott AB, Singh M, Toribio JA, Hernandez-Jover M, Barnes B, Glass K, Moloney B, Lee A, Groves P.

PLoS One. 2018 Mar 5;13(3):e0194086. doi: 10.1371/journal.pone.0194086. eCollection 2018.

11.

Assessing the probability of introduction and spread of avian influenza (AI) virus in commercial Australian poultry operations using an expert opinion elicitation.

Singh M, Toribio JA, Scott AB, Groves P, Barnes B, Glass K, Moloney B, Black A, Hernandez-Jover M.

PLoS One. 2018 Mar 1;13(3):e0193730. doi: 10.1371/journal.pone.0193730. eCollection 2018.

12.

Role of the inducible adhesin, CpAls7, in binding of Candida parapsilosis to extracellular matrix under fluid shear.

Neale MN, Glass KA, Longley SJ, Kim DJ, Laforce-Nesbitt SS, Wortzel JD, Shaw SK, Bliss JM.

Infect Immun. 2018 Jan 29. pii: IAI.00892-17. doi: 10.1128/IAI.00892-17. [Epub ahead of print]

PMID:
29378793
13.

Incorporating Whole-Genome Sequencing into Public Health Surveillance: Lessons from Prospective Sequencing of Salmonella Typhimurium in Australia.

Ford L, Carter GP, Wang Q, Seemann T, Sintchenko V, Glass K, Williamson DA, Howard P, Valcanis M, Castillo CFS, Sait M, Howden BP, Kirk MD.

Foodborne Pathog Dis. 2018 Mar;15(3):161-167. doi: 10.1089/fpd.2017.2352. Epub 2018 Jan 16.

PMID:
29336594
14.

Ensemble genomic analysis in human lung tissue identifies novel genes for chronic obstructive pulmonary disease.

Morrow JD, Cho MH, Platig J, Zhou X, DeMeo DL, Qiu W, Celli B, Marchetti N, Criner GJ, Bueno R, Washko GR, Glass K, Quackenbush J, Silverman EK, Hersh CP.

Hum Genomics. 2018 Jan 15;12(1):1. doi: 10.1186/s40246-018-0132-z.

15.

Human Lung DNA Methylation Quantitative Trait Loci Colocalize with Chronic Obstructive Pulmonary Disease Genome-Wide Association Loci.

Morrow JD, Glass K, Cho MH, Hersh CP, Pinto-Plata V, Celli B, Marchetti N, Criner G, Bueno R, Washko G, Choi AMK, Quackenbush J, Silverman EK, DeMeo DL.

Am J Respir Crit Care Med. 2018 May 15;197(10):1275-1284. doi: 10.1164/rccm.201707-1434OC.

PMID:
29313708
16.

Serotonin receptor 2B signaling with interstitial cell activation and leaflet remodeling in degenerative mitral regurgitation.

Driesbaugh KH, Branchetti E, Grau JB, Keeney SJ, Glass K, Oyama MA, Rioux N, Ayoub S, Sacks MS, Quackenbush J, Levy RJ, Ferrari G.

J Mol Cell Cardiol. 2018 Feb;115:94-103. doi: 10.1016/j.yjmcc.2017.12.014. Epub 2017 Dec 30.

PMID:
29291394
17.

Clostridium difficile classification overestimates hospital-acquired infections.

McLure A, Clements ACA, Kirk M, Glass K.

J Hosp Infect. 2017 Dec 16. pii: S0195-6701(17)30689-8. doi: 10.1016/j.jhin.2017.12.014. [Epub ahead of print]

PMID:
29258917
18.

Estimating drivers of cell state transitions using gene regulatory network models.

Schlauch D, Glass K, Hersh CP, Silverman EK, Quackenbush J.

BMC Syst Biol. 2017 Dec 13;11(1):139. doi: 10.1186/s12918-017-0517-y.

19.

A Synthetic Population for Modelling the Dynamics of Infectious Disease Transmission in American Samoa.

Xu Z, Glass K, Lau CL, Geard N, Graves P, Clements A.

Sci Rep. 2017 Dec 1;7(1):16725. doi: 10.1038/s41598-017-17093-8.

20.

Comparisons of management practices and farm design on Australian commercial layer and meat chicken farms: Cage, barn and free range.

Scott AB, Singh M, Toribio JA, Hernandez-Jover M, Barnes B, Glass K, Moloney B, Lee A, Groves P.

PLoS One. 2017 Nov 22;12(11):e0188505. doi: 10.1371/journal.pone.0188505. eCollection 2017. Erratum in: PLoS One. 2018 Mar 5;13(3):e0194086.

21.

Variation in hospital mortality in an Australian neonatal intensive care unit network.

Abdel-Latif ME, Nowak G, Bajuk B, Glass K, Harley D.

Arch Dis Child Fetal Neonatal Ed. 2018 Jul;103(4):F331-F336. doi: 10.1136/archdischild-2017-313222. Epub 2017 Oct 26.

PMID:
29074720
22.

Understanding Tissue-Specific Gene Regulation.

Sonawane AR, Platig J, Fagny M, Chen CY, Paulson JN, Lopes-Ramos CM, DeMeo DL, Quackenbush J, Glass K, Kuijjer ML.

Cell Rep. 2017 Oct 24;21(4):1077-1088. doi: 10.1016/j.celrep.2017.10.001.

23.

Learning about individuals' health from aggregate data.

Colbaugh R, Glass K.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:3106-3109. doi: 10.1109/EMBC.2017.8037514.

PMID:
29060555
24.

Ensemble transfer learning for Alzheimer's disease diagnosis.

Colbaugh R, Glass K, Gallegos G.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:3102-3105. doi: 10.1109/EMBC.2017.8037513.

PMID:
29060554
25.

Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data.

Paulson JN, Chen CY, Lopes-Ramos CM, Kuijjer ML, Platig J, Sonawane AR, Fagny M, Glass K, Quackenbush J.

BMC Bioinformatics. 2017 Oct 3;18(1):437. doi: 10.1186/s12859-017-1847-x.

26.

Potential impact of a maternal vaccine for RSV: A mathematical modelling study.

Hogan AB, Campbell PT, Blyth CC, Lim FJ, Fathima P, Davis S, Moore HC, Glass K.

Vaccine. 2017 Oct 27;35(45):6172-6179. doi: 10.1016/j.vaccine.2017.09.043. Epub 2017 Sep 28.

PMID:
28967522
27.

Regulatory network changes between cell lines and their tissues of origin.

Lopes-Ramos CM, Paulson JN, Chen CY, Kuijjer ML, Fagny M, Platig J, Sonawane AR, DeMeo DL, Quackenbush J, Glass K.

BMC Genomics. 2017 Sep 12;18(1):723. doi: 10.1186/s12864-017-4111-x.

28.

Effects of Nitrite and Erythorbate on Clostridium perfringens Growth during Extended Cooling of Cured Ham.

Osterbauer KJ, King AM, Seman DL, Milkowski AL, Glass KA, Sindelar JJ.

J Food Prot. 2017 Oct;80(10):1697-1704. doi: 10.4315/0362-028X.JFP-17-096.

PMID:
28885050
29.

Exploring regulation in tissues with eQTL networks.

Fagny M, Paulson JN, Kuijjer ML, Sonawane AR, Chen CY, Lopes-Ramos CM, Glass K, Quackenbush J, Platig J.

Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):E7841-E7850. doi: 10.1073/pnas.1707375114. Epub 2017 Aug 29.

30.

Inhibition of Clostridium botulinum in Model Reduced-Sodium Pasteurized Prepared Cheese Products.

Glass KA, Mu M, LeVine B, Rossi F.

J Food Prot. 2017 Sep;80(9):1478-1488. doi: 10.4315/0362-028X.JFP-17-027.

PMID:
28786718
31.

Healthcare-Associated Clostridium difficile Infections are Sustained by Disease from the Community.

McLure A, Clements ACA, Kirk M, Glass K.

Bull Math Biol. 2017 Oct;79(10):2242-2257. doi: 10.1007/s11538-017-0328-8. Epub 2017 Aug 3.

PMID:
28776206
32.

Differential connectivity of gene regulatory networks distinguishes corticosteroid response in asthma.

Qiu W, Guo F, Glass K, Yuan GC, Quackenbush J, Zhou X, Tantisira KG.

J Allergy Clin Immunol. 2018 Apr;141(4):1250-1258. doi: 10.1016/j.jaci.2017.05.052. Epub 2017 Jul 20.

PMID:
28736268
33.

Diagnosis and Treatment Considerations for Nonphyseal Long Bone Fractures in the Foal.

Glass K, Watts AE.

Vet Clin North Am Equine Pract. 2017 Aug;33(2):431-438. doi: 10.1016/j.cveq.2017.03.013. Review.

PMID:
28687099
34.

Septic Arthritis, Physitis, and Osteomyelitis in Foals.

Glass K, Watts AE.

Vet Clin North Am Equine Pract. 2017 Aug;33(2):299-314. doi: 10.1016/j.cveq.2017.03.002. Review.

PMID:
28687092
35.

Effect of Cultured Celery Juice, Temperature, and Product Composition on the Inhibition of Proteolytic Clostridium botulinum Toxin Production.

Golden MC, Wanless BJ, David JRD, Kottapalli B, Lineback DS, Talley RJ, Glass KA.

J Food Prot. 2017 Aug;80(8):1259-1265. doi: 10.4315/0362-028X.JFP-17-011.

PMID:
28686493
36.

Effect of Equilibrated pH and Indigenous Spoilage Microorganisms on the Inhibition of Proteolytic Clostridium botulinum Toxin Production in Experimental Meals under Temperature Abuse.

Golden MC, Wanless BJ, David JRD, Lineback DS, Talley RJ, Kottapalli B, Glass KA.

J Food Prot. 2017 Aug;80(8):1252-1258. doi: 10.4315/0362-028X.JFP-17-012.

PMID:
28686492
37.

Biomarker correlation network in colorectal carcinoma by tumor anatomic location.

Nishihara R, Glass K, Mima K, Hamada T, Nowak JA, Qian ZR, Kraft P, Giovannucci EL, Fuchs CS, Chan AT, Quackenbush J, Ogino S, Onnela JP.

BMC Bioinformatics. 2017 Jun 17;18(1):304. doi: 10.1186/s12859-017-1718-5.

38.

Oropharyngeal Administration of Colostrum Increases Salivary Secretory IgA Levels in Very Low-Birth-Weight Infants.

Glass KM, Greecher CP, Doheny KK.

Am J Perinatol. 2017 Dec;34(14):1389-1395. doi: 10.1055/s-0037-1603655. Epub 2017 Jun 2. No abstract available.

39.

Multidisciplinary Clinics for Colorectal Cancer Care Reduces Treatment Time.

Kozak VN, Khorana AA, Amarnath S, Glass KE, Kalady MF.

Clin Colorectal Cancer. 2017 Dec;16(4):366-371. doi: 10.1016/j.clcc.2017.03.020. Epub 2017 Apr 19.

PMID:
28527628
40.

Biological function and histone recognition of family IV bromodomain-containing proteins.

Lloyd JT, Glass KC.

J Cell Physiol. 2018 Mar;233(3):1877-1886. doi: 10.1002/jcp.26010. Epub 2017 Jun 13. Review.

PMID:
28500727
41.

Building a Better Neonatal Extracorporeal Life Support Circuit: Comparison of Hemodynamic Performance and Gaseous Microemboli Handling in Different Pump and Oxygenator Technologies.

Glass K, Trivedi P, Wang S, Woitas K, Kunselman AR, √úndar A.

Artif Organs. 2017 Apr;41(4):392-400. doi: 10.1111/aor.12908.

PMID:
28397410
42.

Multi-scale chromatin state annotation using a hierarchical hidden Markov model.

Marco E, Meuleman W, Huang J, Glass K, Pinello L, Wang J, Kellis M, Yuan GC.

Nat Commun. 2017 Apr 7;8:15011. doi: 10.1038/ncomms15011.

43.

Estimating gene regulatory networks with pandaR.

Schlauch D, Paulson JN, Young A, Glass K, Quackenbush J.

Bioinformatics. 2017 Jul 15;33(14):2232-2234. doi: 10.1093/bioinformatics/btx139.

44.

Functional interactors of three genome-wide association study genes are differentially expressed in severe chronic obstructive pulmonary disease lung tissue.

Morrow JD, Zhou X, Lao T, Jiang Z, DeMeo DL, Cho MH, Qiu W, Cloonan S, Pinto-Plata V, Celli B, Marchetti N, Criner GJ, Bueno R, Washko GR, Glass K, Quackenbush J, Choi AM, Silverman EK, Hersh CP.

Sci Rep. 2017 Mar 13;7:44232. doi: 10.1038/srep44232.

45.

Transcriptomic Analysis of Lung Tissue from Cigarette Smoke-Induced Emphysema Murine Models and Human Chronic Obstructive Pulmonary Disease Show Shared and Distinct Pathways.

Yun JH, Morrow J, Owen CA, Qiu W, Glass K, Lao T, Jiang Z, Perrella MA, Silverman EK, Zhou X, Hersh CP.

Am J Respir Cell Mol Biol. 2017 Jul;57(1):47-58. doi: 10.1165/rcmb.2016-0328OC.

46.

Lower complication rates with office-based D&C under ultrasound guidance for missed abortion.

Chaikof M, Lazer T, Gat I, Quach K, Alkudmani B, Zohni K, Baratz A, Glass K, Sharma P, Librach C.

Minerva Ginecol. 2017 Feb;69(1):23-28. doi: 10.23736/S0026-4784.16.03935-6.

PMID:
28116885
47.

Burden of Clostridium difficile infection: Associated hospitalization in a cohort of middle-aged and older adults.

Chen Y, Glass K, Liu B, Korda RJ, Riley TV, Kirk MD.

Am J Infect Control. 2017 May 1;45(5):508-511. doi: 10.1016/j.ajic.2016.12.006. Epub 2017 Jan 13.

PMID:
28089675
48.

Use of Proton Pump Inhibitors and the Risk of Hospitalization for Infectious Gastroenteritis.

Chen Y, Liu B, Glass K, Du W, Banks E, Kirk M.

PLoS One. 2016 Dec 20;11(12):e0168618. doi: 10.1371/journal.pone.0168618. eCollection 2016.

49.

The campylobacteriosis conundrum - examining the incidence of infection with Campylobacter sp. in Australia, 1998-2013.

Moffatt CR, Glass K, Stafford R, D'Este C, Kirk MD.

Epidemiol Infect. 2017 Mar;145(4):839-847. doi: 10.1017/S0950268816002909. Epub 2016 Dec 12.

PMID:
27938447
50.

Signalment, clinical features, and outcome for male horses with urethral rents following perineal urethrotomy or corpus spongiotomy: 33 cases (1989-2013).

Glass KG, Arnold CE, Varner DD, Chaffin MK, Schumacher J.

J Am Vet Med Assoc. 2016 Dec 15;249(12):1421-1427.

PMID:
27901454

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