Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 141

1.

Microbial Trimethylamine Metabolism in Marine Environments.

Sun J, Mausz MA, Chen Y, Giovannoni SJ.

Environ Microbiol. 2018 Oct 28. doi: 10.1111/1462-2920.14461. [Epub ahead of print] Review.

PMID:
30370577
2.

Globally Important Haptophyte Algae Use Exogenous Pyrimidine Compounds More Efficiently than Thiamin.

Gutowska MA, Shome B, Sudek S, McRose DL, Hamilton M, Giovannoni SJ, Begley TP, Worden AZ.

MBio. 2017 Oct 10;8(5). pii: e01459-17. doi: 10.1128/mBio.01459-17.

3.

SAR202 Genomes from the Dark Ocean Predict Pathways for the Oxidation of Recalcitrant Dissolved Organic Matter.

Landry Z, Swan BK, Herndl GJ, Stepanauskas R, Giovannoni SJ.

MBio. 2017 Apr 18;8(2). pii: e00413-17. doi: 10.1128/mBio.00413-17.

4.

Newly discovered deep-branching marine plastid lineages are numerically rare but globally distributed.

Choi CJ, Bachy C, Jaeger GS, Poirier C, Sudek L, Sarma VVSS, Mahadevan A, Giovannoni SJ, Worden AZ.

Curr Biol. 2017 Jan 9;27(1):R15-R16. doi: 10.1016/j.cub.2016.11.032.

5.

Three-Dimensional Structure of the Ultraoligotrophic Marine Bacterium "Candidatus Pelagibacter ubique".

Zhao X, Schwartz CL, Pierson J, Giovannoni SJ, McIntosh JR, Nicastro D.

Appl Environ Microbiol. 2017 Jan 17;83(3). pii: e02807-16. doi: 10.1128/AEM.02807-16. Print 2017 Feb 1.

6.

Proteome Remodeling in Response to Sulfur Limitation in "Candidatus Pelagibacter ubique".

Smith DP, Nicora CD, Carini P, Lipton MS, Norbeck AD, Smith RD, Giovannoni SJ.

mSystems. 2016 Jul 12;1(4). pii: e00068-16. eCollection 2016 Jul-Aug.

7.

Corrigendum: The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol.

Sun J, Todd JD, Thrash JC, Qian Y, Qian MC, Temperton B, Guo J, Fowler EK, Aldrich JT, Nicora CD, Lipton MS, Smith RD, De Leenheer P, Payne SH, Johnston AW, Davie-Martin CL, Halsey KH, Giovannoni SJ.

Nat Microbiol. 2016 Oct 3;1(11):16210. doi: 10.1038/nmicrobiol.2016.210. No abstract available.

PMID:
27694837
8.

SAR11 Bacteria: The Most Abundant Plankton in the Oceans.

Giovannoni SJ.

Ann Rev Mar Sci. 2017 Jan 3;9:231-255. doi: 10.1146/annurev-marine-010814-015934. Epub 2016 Sep 28.

PMID:
27687974
9.

The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol.

Sun J, Todd JD, Thrash JC, Qian Y, Qian MC, Temperton B, Guo J, Fowler EK, Aldrich JT, Nicora CD, Lipton MS, Smith RD, De Leenheer P, Payne SH, Johnston AW, Davie-Martin CL, Halsey KH, Giovannoni SJ.

Nat Microbiol. 2016 May 16;1(8):16065. doi: 10.1038/nmicrobiol.2016.65. Erratum in: Nat Microbiol. 2016 Oct 03;1(11):16210.

PMID:
27573103
10.

Meta-omic signatures of microbial metal and nitrogen cycling in marine oxygen minimum zones.

Glass JB, Kretz CB, Ganesh S, Ranjan P, Seston SL, Buck KN, Landing WM, Morton PL, Moffett JW, Giovannoni SJ, Vergin KL, Stewart FJ.

Front Microbiol. 2015 Sep 28;6:998. doi: 10.3389/fmicb.2015.00998. eCollection 2015.

11.

SAR11 lipid renovation in response to phosphate starvation.

Carini P, Van Mooy BA, Thrash JC, White A, Zhao Y, Campbell EO, Fredricks HF, Giovannoni SJ.

Proc Natl Acad Sci U S A. 2015 Jun 23;112(25):7767-72. doi: 10.1073/pnas.1505034112. Epub 2015 Jun 8.

12.

Environmental science. Rethinking the marine carbon cycle: factoring in the multifarious lifestyles of microbes.

Worden AZ, Follows MJ, Giovannoni SJ, Wilken S, Zimmerman AE, Keeling PJ.

Science. 2015 Feb 13;347(6223):1257594. doi: 10.1126/science.1257594. Review.

PMID:
25678667
13.

Methane production by phosphate-starved SAR11 chemoheterotrophic marine bacteria.

Carini P, White AE, Campbell EO, Giovannoni SJ.

Nat Commun. 2014 Jul 7;5:4346. doi: 10.1038/ncomms5346.

PMID:
25000228
14.

Discovery of a SAR11 growth requirement for thiamin's pyrimidine precursor and its distribution in the Sargasso Sea.

Carini P, Campbell EO, Morré J, Sañudo-Wilhelmy SA, Thrash JC, Bennett SE, Temperton B, Begley T, Giovannoni SJ.

ISME J. 2014 Aug;8(8):1727-38. doi: 10.1038/ismej.2014.61. Epub 2014 Apr 29.

15.

Implications of streamlining theory for microbial ecology.

Giovannoni SJ, Cameron Thrash J, Temperton B.

ISME J. 2014 Aug;8(8):1553-65. doi: 10.1038/ismej.2014.60. Epub 2014 Apr 17. Review.

16.

Marine bacterioplankton community turnover within seasonally hypoxic waters of a subtropical sound: Devil's Hole, Bermuda.

Parsons RJ, Nelson CE, Carlson CA, Denman CC, Andersson AJ, Kledzik AL, Vergin KL, McNally SP, Treusch AH, Giovannoni SJ.

Environ Microbiol. 2015 Oct;17(10):3481-99. doi: 10.1111/1462-2920.12445. Epub 2014 Apr 18.

PMID:
24589037
17.

Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype.

Thrash JC, Temperton B, Swan BK, Landry ZC, Woyke T, DeLong EF, Stepanauskas R, Giovannoni SJ.

ISME J. 2014 Jul;8(7):1440-51. doi: 10.1038/ismej.2013.243. Epub 2014 Jan 23.

18.

Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus.

Biller SJ, Berube PM, Berta-Thompson JW, Kelly L, Roggensack SE, Awad L, Roache-Johnson KH, Ding H, Giovannoni SJ, Rocap G, Moore LR, Chisholm SW.

Sci Data. 2014 Sep 30;1:140034. doi: 10.1038/sdata.2014.34. eCollection 2014.

19.

New rRNA gene-based phylogenies of the Alphaproteobacteria provide perspective on major groups, mitochondrial ancestry and phylogenetic instability.

Ferla MP, Thrash JC, Giovannoni SJ, Patrick WM.

PLoS One. 2013 Dec 11;8(12):e83383. doi: 10.1371/journal.pone.0083383. eCollection 2013.

20.

Proteomic and transcriptomic analyses of "Candidatus Pelagibacter ubique" describe the first PII-independent response to nitrogen limitation in a free-living Alphaproteobacterium.

Smith DP, Thrash JC, Nicora CD, Lipton MS, Burnum-Johnson KE, Carini P, Smith RD, Giovannoni SJ.

MBio. 2013 Nov 26;4(6):e00133-12. doi: 10.1128/mBio.00133-12.

21.

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean.

Swan BK, Tupper B, Sczyrba A, Lauro FM, Martinez-Garcia M, González JM, Luo H, Wright JJ, Landry ZC, Hanson NW, Thompson BP, Poulton NJ, Schwientek P, Acinas SG, Giovannoni SJ, Moran MA, Hallam SJ, Cavicchioli R, Woyke T, Stepanauskas R.

Proc Natl Acad Sci U S A. 2013 Jul 9;110(28):11463-8. doi: 10.1073/pnas.1304246110. Epub 2013 Jun 25.

22.

High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences.

Vergin KL, Beszteri B, Monier A, Thrash JC, Temperton B, Treusch AH, Kilpert F, Worden AZ, Giovannoni SJ.

ISME J. 2013 Jul;7(7):1322-32. doi: 10.1038/ismej.2013.32. Epub 2013 Mar 7.

23.

Abundant SAR11 viruses in the ocean.

Zhao Y, Temperton B, Thrash JC, Schwalbach MS, Vergin KL, Landry ZC, Ellisman M, Deerinck T, Sullivan MB, Giovannoni SJ.

Nature. 2013 Feb 21;494(7437):357-60. doi: 10.1038/nature11921. Epub 2013 Feb 13.

PMID:
23407494
24.

Nutrient requirements for growth of the extreme oligotroph 'Candidatus Pelagibacter ubique' HTCC1062 on a defined medium.

Carini P, Steindler L, Beszteri S, Giovannoni SJ.

ISME J. 2013 Mar;7(3):592-602. doi: 10.1038/ismej.2012.122. Epub 2012 Oct 25.

25.

Streamlining and core genome conservation among highly divergent members of the SAR11 clade.

Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS.

MBio. 2012 Sep 18;3(5). pii: e00252-12. doi: 10.1128/mBio.00252-12. Print 2012.

26.

Vitamins in the sea.

Giovannoni SJ.

Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):13888-9. doi: 10.1073/pnas.1211722109. Epub 2012 Aug 13. No abstract available.

27.

Metagenomics: microbial diversity through a scratched lens.

Temperton B, Giovannoni SJ.

Curr Opin Microbiol. 2012 Oct;15(5):605-12. doi: 10.1016/j.mib.2012.07.001. Epub 2012 Jul 23. Review.

PMID:
22831844
28.

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade.

Thrash JC, Boyd A, Huggett MJ, Grote J, Carini P, Yoder RJ, Robbertse B, Spatafora JW, Rappé MS, Giovannoni SJ.

Sci Rep. 2011;1:13. doi: 10.1038/srep00013. Epub 2011 Jun 14.

29.

Seasonality in ocean microbial communities.

Giovannoni SJ, Vergin KL.

Science. 2012 Feb 10;335(6069):671-6. doi: 10.1126/science.1198078. Review.

PMID:
22323811
30.

Synergistic metabolism of a broad range of C1 compounds in the marine methylotrophic bacterium HTCC2181.

Halsey KH, Carter AE, Giovannoni SJ.

Environ Microbiol. 2012 Mar;14(3):630-40. doi: 10.1111/j.1462-2920.2011.02605.x. Epub 2011 Oct 9.

PMID:
21981742
31.

Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids.

Treusch AH, Demir-Hilton E, Vergin KL, Worden AZ, Carlson CA, Donatz MG, Burton RM, Giovannoni SJ.

ISME J. 2012 Mar;6(3):481-92. doi: 10.1038/ismej.2011.117. Epub 2011 Sep 29.

32.

One carbon metabolism in SAR11 pelagic marine bacteria.

Sun J, Steindler L, Thrash JC, Halsey KH, Smith DP, Carter AE, Landry ZC, Giovannoni SJ.

PLoS One. 2011;6(8):e23973. doi: 10.1371/journal.pone.0023973. Epub 2011 Aug 23.

33.

Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration.

Steindler L, Schwalbach MS, Smith DP, Chan F, Giovannoni SJ.

PLoS One. 2011 May 9;6(5):e19725. doi: 10.1371/journal.pone.0019725.

34.

DNA phosphorothioation is widespread and quantized in bacterial genomes.

Wang L, Chen S, Vergin KL, Giovannoni SJ, Chan SW, DeMott MS, Taghizadeh K, Cordero OX, Cutler M, Timberlake S, Alm EJ, Polz MF, Pinhassi J, Deng Z, Dedon PC.

Proc Natl Acad Sci U S A. 2011 Feb 15;108(7):2963-8. doi: 10.1073/pnas.1017261108. Epub 2011 Feb 1.

35.

First investigation of the microbiology of the deepest layer of ocean crust.

Mason OU, Nakagawa T, Rosner M, Van Nostrand JD, Zhou J, Maruyama A, Fisk MR, Giovannoni SJ.

PLoS One. 2010 Nov 5;5(11):e15399. doi: 10.1371/journal.pone.0015399.

36.

Genome sequence of the Marine Janibacter Sp. Strain HTCC2649.

Thrash JC, Cho JC, Bertagnolli AD, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ.

J Bacteriol. 2011 Jan;193(2):584-5. doi: 10.1128/JB.01298-10. Epub 2010 Nov 12.

37.

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system.

Sowell SM, Abraham PE, Shah M, Verberkmoes NC, Smith DP, Barofsky DF, Giovannoni SJ.

ISME J. 2011 May;5(5):856-65. doi: 10.1038/ismej.2010.168. Epub 2010 Nov 11.

38.

Complete genome sequence of strain HTCC2170, a novel member of the genus Maribacter in the family Flavobacteriaceae.

Oh HM, Kang I, Yang SJ, Jang Y, Vergin KL, Giovannoni SJ, Cho JC.

J Bacteriol. 2011 Jan;193(1):303-4. doi: 10.1128/JB.01207-10. Epub 2010 Oct 29.

39.

Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order "Parvularculales" in the class Alphaproteobacteria.

Oh HM, Kang I, Vergin KL, Kang D, Rhee KH, Giovannoni SJ, Cho JC.

J Bacteriol. 2011 Jan;193(1):305-6. doi: 10.1128/JB.01205-10. Epub 2010 Oct 29.

40.

Genome sequence of strain HTCC2083, a novel member of the marine clade Roseobacter.

Kang I, Vergin KL, Oh HM, Choi A, Giovannoni SJ, Cho JC.

J Bacteriol. 2011 Jan;193(1):319-20. doi: 10.1128/JB.01268-10. Epub 2010 Oct 29.

41.

Genome sequence of Oceanicaulis sp. strain HTCC2633, isolated from the Western Sargasso Sea.

Oh HM, Kang I, Vergin KL, Lee K, Giovannoni SJ, Cho JC.

J Bacteriol. 2011 Jan;193(1):317-8. doi: 10.1128/JB.01267-10. Epub 2010 Oct 29.

42.

Genome sequence of the marine alphaproteobacterium HTCC2150, assigned to the Roseobacter clade.

Kang I, Oh HM, Vergin KL, Giovannoni SJ, Cho JC.

J Bacteriol. 2010 Dec;192(23):6315-6. doi: 10.1128/JB.01088-10. Epub 2010 Oct 1.

43.

Genome sequences of Pelagibaca bermudensis HTCC2601T and Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine Roseobacter genera.

Thrash JC, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ.

J Bacteriol. 2010 Oct;192(20):5552-3. doi: 10.1128/JB.00873-10. Epub 2010 Aug 20.

44.

Complete genome sequence of Croceibacter atlanticus HTCC2559T.

Oh HM, Kang I, Ferriera S, Giovannoni SJ, Cho JC.

J Bacteriol. 2010 Sep;192(18):4796-7. doi: 10.1128/JB.00733-10. Epub 2010 Jul 16.

45.

Genome sequence of Fulvimarina pelagi HTCC2506T, a Mn(II)-oxidizing alphaproteobacterium possessing an aerobic anoxygenic photosynthetic gene cluster and Xanthorhodopsin.

Kang I, Oh HM, Lim SI, Ferriera S, Giovannoni SJ, Cho JC.

J Bacteriol. 2010 Sep;192(18):4798-9. doi: 10.1128/JB.00761-10. Epub 2010 Jul 16.

46.

Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon Coast.

Oh HM, Kang I, Ferriera S, Giovannoni SJ, Cho JC.

J Bacteriol. 2010 Sep;192(17):4530-1. doi: 10.1128/JB.00683-10. Epub 2010 Jul 2.

47.

Genome sequences of strains HTCC2148 and HTCC2080, belonging to the OM60/NOR5 clade of the Gammaproteobacteria.

Thrash JC, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ.

J Bacteriol. 2010 Jul;192(14):3842-3. doi: 10.1128/JB.00511-10. Epub 2010 May 14.

48.

Genome sequence of the novel marine member of the Gammaproteobacteria strain HTCC5015.

Thrash JC, Stingl U, Cho JC, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ.

J Bacteriol. 2010 Jul;192(14):3838-9. doi: 10.1128/JB.00510-10. Epub 2010 May 14.

49.

Transcriptional and translational regulatory responses to iron limitation in the globally distributed marine bacterium Candidatus pelagibacter ubique.

Smith DP, Kitner JB, Norbeck AD, Clauss TR, Lipton MS, Schwalbach MS, Steindler L, Nicora CD, Smith RD, Giovannoni SJ.

PLoS One. 2010 May 5;5(5):e10487. doi: 10.1371/journal.pone.0010487.

50.

Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola batsensis HTCC2597(TDelta).

Thrash JC, Cho JC, Vergin KL, Giovannoni SJ.

J Bacteriol. 2010 Jul;192(13):3549-50. doi: 10.1128/JB.00412-10. Epub 2010 Apr 23.

Supplemental Content

Loading ...
Support Center