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Enlarging biopsy-proven fibroadenoma: Is surgical excision necessary?

Dialani V, Chansakul T, Lai KC, Gilmore H, Sayegh NY, Slanetz PJ.

Clin Imaging. 2019 Sep - Oct;57:35-39. doi: 10.1016/j.clinimag.2019.03.014. Epub 2019 Apr 4.


HIV self-screening distribution preferences and experiences among men who have sex with men in Mpumalanga Province: Informing policy for South Africa.

Radebe O, Lippman SA, Lane T, Gilmore H, Agnew E, Manyuchi A, McIntyre JA.

S Afr Med J. 2019 Mar 29;109(4):227-231. doi: 10.7196/SAMJ.2019.v109i4.13818.


Association of Peritumoral Radiomics With Tumor Biology and Pathologic Response to Preoperative Targeted Therapy for HER2 (ERBB2)-Positive Breast Cancer.

Braman N, Prasanna P, Whitney J, Singh S, Beig N, Etesami M, Bates DDB, Gallagher K, Bloch BN, Vulchi M, Turk P, Bera K, Abraham J, Sikov WM, Somlo G, Harris LN, Gilmore H, Plecha D, Varadan V, Madabhushi A.

JAMA Netw Open. 2019 Apr 5;2(4):e192561. doi: 10.1001/jamanetworkopen.2019.2561.


HistoQC: An Open-Source Quality Control Tool for Digital Pathology Slides.

Janowczyk A, Zuo R, Gilmore H, Feldman M, Madabhushi A.

JCO Clin Cancer Inform. 2019 Apr;3:1-7. doi: 10.1200/CCI.18.00157.


Convolutional neural network initialized active contour model with adaptive ellipse fitting for nuclear segmentation on breast histopathological images.

Xu J, Gong L, Wang G, Lu C, Gilmore H, Zhang S, Madabhushi A.

J Med Imaging (Bellingham). 2019 Jan;6(1):017501. doi: 10.1117/1.JMI.6.1.017501. Epub 2019 Feb 8.


Systemic Delivery of Tumor-Targeting siRNA Nanoparticles against an Oncogenic LncRNA Facilitates Effective Triple-Negative Breast Cancer Therapy.

Vaidya AM, Sun Z, Ayat N, Schilb A, Liu X, Jiang H, Sun D, Scheidt J, Qian V, He S, Gilmore H, Schiemann WP, Lu ZR.

Bioconjug Chem. 2019 Mar 20;30(3):907-919. doi: 10.1021/acs.bioconjchem.9b00028. Epub 2019 Feb 21.


HIV self-testing: South African young adults' recommendations for ease of use, test kit contents, accessibility, and supportive resources.

Ritchwood TD, Selin A, Pettifor A, Lippman SA, Gilmore H, Kimaru L, Hove J, Wagner R, Twine R, Kahn K.

BMC Public Health. 2019 Jan 29;19(1):123. doi: 10.1186/s12889-019-6402-4.


Beyond Cartilage Repair: The Role of the Osteochondral Unit in Joint Health and Disease.

Lepage SIM, Robson N, Gilmore H, Davis O, Hooper A, St John S, Kamesan V, Gelis P, Carvajal D, Hurtig M, Koch TG.

Tissue Eng Part B Rev. 2019 Apr;25(2):114-125. doi: 10.1089/ten.TEB.2018.0122. Review.


Clinical, imaging, and intervention factors associated with the upgrade of isolated flat epithelial atypia.

Alencherry E, Goel R, Gore S, Thompson C, Dubchuk C, Bomeisl P, Gilmore H, Dyhdalo K, Plecha DM.

Clin Imaging. 2019 Mar - Apr;54:21-24. doi: 10.1016/j.clinimag.2018.11.008. Epub 2018 Nov 20.


Ability to use oral fluid and fingerstick HIV self-testing (HIVST) among South African MSM.

Lippman SA, Gilmore HJ, Lane T, Radebe O, Chen YH, Mlotshwa N, Maleke K, Manyuchi AE, McIntyre J.

PLoS One. 2018 Nov 8;13(11):e0206849. doi: 10.1371/journal.pone.0206849. eCollection 2018.


Homophilic CD44 Interactions Mediate Tumor Cell Aggregation and Polyclonal Metastasis in Patient-Derived Breast Cancer Models.

Liu X, Taftaf R, Kawaguchi M, Chang YF, Chen W, Entenberg D, Zhang Y, Gerratana L, Huang S, Patel DB, Tsui E, Adorno-Cruz V, Chirieleison SM, Cao Y, Harney AS, Patel S, Patsialou A, Shen Y, Avril S, Gilmore HL, Lathia JD, Abbott DW, Cristofanilli M, Condeelis JS, Liu H.

Cancer Discov. 2019 Jan;9(1):96-113. doi: 10.1158/2159-8290.CD-18-0065. Epub 2018 Oct 25.


Nuclear shape and orientation features from H&E images predict survival in early-stage estrogen receptor-positive breast cancers.

Lu C, Romo-Bucheli D, Wang X, Janowczyk A, Ganesan S, Gilmore H, Rimm D, Madabhushi A.

Lab Invest. 2018 Nov;98(11):1438-1448. doi: 10.1038/s41374-018-0095-7. Epub 2018 Jun 29.


Clinicopathological, immunohistochemical and molecular correlation of neural crest transcription factor SOX10 expression in triple-negative breast carcinoma.

Harbhajanka A, Chahar S, Miskimen K, Silverman P, Harris L, Williams N, Varadan V, Gilmore H.

Hum Pathol. 2018 Oct;80:163-169. doi: 10.1016/j.humpath.2018.06.007. Epub 2018 Jun 9.


Quantitative nuclear histomorphometry predicts oncotype DX risk categories for early stage ER+ breast cancer.

Whitney J, Corredor G, Janowczyk A, Ganesan S, Doyle S, Tomaszewski J, Feldman M, Gilmore H, Madabhushi A.

BMC Cancer. 2018 May 30;18(1):610. doi: 10.1186/s12885-018-4448-9.


High-throughput adaptive sampling for whole-slide histopathology image analysis (HASHI) via convolutional neural networks: Application to invasive breast cancer detection.

Cruz-Roa A, Gilmore H, Basavanhally A, Feldman M, Ganesan S, Shih N, Tomaszewski J, Madabhushi A, González F.

PLoS One. 2018 May 24;13(5):e0196828. doi: 10.1371/journal.pone.0196828. eCollection 2018.


Beyond Social Desirability Bias: Investigating Inconsistencies in Self-Reported HIV Testing and Treatment Behaviors Among HIV-Positive Adults in North West Province, South Africa.

Mooney AC, Campbell CK, Ratlhagana MJ, Grignon JS, Mazibuko S, Agnew E, Gilmore H, Barnhart S, Puren A, Shade SB, Liegler T, Lippman SA.

AIDS Behav. 2018 Jul;22(7):2368-2379. doi: 10.1007/s10461-018-2155-9.


A resolution adaptive deep hierarchical (RADHicaL) learning scheme applied to nuclear segmentation of digital pathology images.

Janowczyk A, Doyle S, Gilmore H, Madabhushi A.

Comput Methods Biomech Biomed Eng Imaging Vis. 2018;6(3):270-276. doi: 10.1080/21681163.2016.1141063. Epub 2016 Apr 28.


A Mobile Health Strategy to Support Adherence to Antiretroviral Preexposure Prophylaxis.

Fuchs JD, Stojanovski K, Vittinghoff E, McMahan VM, Hosek SG, Amico KR, Kouyate A, Gilmore HJ, Buchbinder SP, Lester RT, Grant RM, Liu AY.

AIDS Patient Care STDS. 2018 Mar;32(3):104-111. doi: 10.1089/apc.2017.0255.


A breast multi-disciplinary genomic tumor board is feasible and can provide timely and impactful recommendations.

Tsung K, Thompson CL, Knight JM, Maximuk S, Sadri N, Gilmore H, Keri RA, Vinayak S, Harris L, Silverman P.

Breast J. 2018 Jul;24(4):676-677. doi: 10.1111/tbj.13027. Epub 2018 Mar 8. No abstract available.


High Acceptability and Increased HIV-Testing Frequency After Introduction of HIV Self-Testing and Network Distribution Among South African MSM.

Lippman SA, Lane T, Rabede O, Gilmore H, Chen YH, Mlotshwa N, Maleke K, Marr A, McIntyre JA.

J Acquir Immune Defic Syndr. 2018 Mar 1;77(3):279-287. doi: 10.1097/QAI.0000000000001601.


The lncRNA BORG Drives Breast Cancer Metastasis and Disease Recurrence.

Gooding AJ, Zhang B, Jahanbani FK, Gilmore HL, Chang JC, Valadkhan S, Schiemann WP.

Sci Rep. 2017 Oct 5;7(1):12698. doi: 10.1038/s41598-017-12716-6.


Integrated Diagnostics: The Computational Revolution Catalyzing Cross-disciplinary Practices in Radiology, Pathology, and Genomics.

Lundström CF, Gilmore HL, Ros PR.

Radiology. 2017 Oct;285(1):12-15. doi: 10.1148/radiol.2017170062. Review. No abstract available.


Erratum to: Intratumoral and peritumoral radiomics for the pretreatment prediction of pathological complete response to neoadjuvant chemotherapy based on breast DCE-MRI.

Braman NM, Etesami M, Prasanna P, Dubchuk C, Gilmore H, Tiwari P, Plecha D, Madabhushi A.

Breast Cancer Res. 2017 Jul 10;19(1):80. doi: 10.1186/s13058-017-0862-1. No abstract available.


Intratumoral and peritumoral radiomics for the pretreatment prediction of pathological complete response to neoadjuvant chemotherapy based on breast DCE-MRI.

Braman NM, Etesami M, Prasanna P, Dubchuk C, Gilmore H, Tiwari P, Plecha D, Madabhushi A.

Breast Cancer Res. 2017 May 18;19(1):57. doi: 10.1186/s13058-017-0846-1. Erratum in: Breast Cancer Res. 2017 Jul 10;19(1):80.


Accurate and reproducible invasive breast cancer detection in whole-slide images: A Deep Learning approach for quantifying tumor extent.

Cruz-Roa A, Gilmore H, Basavanhally A, Feldman M, Ganesan S, Shih NNC, Tomaszewski J, González FA, Madabhushi A.

Sci Rep. 2017 Apr 18;7:46450. doi: 10.1038/srep46450.


Risk, safety and sex among male PrEP users: time for a new understanding.

Koester K, Amico RK, Gilmore H, Liu A, McMahan V, Mayer K, Hosek S, Grant R.

Cult Health Sex. 2017 Dec;19(12):1301-1313. doi: 10.1080/13691058.2017.1310927. Epub 2017 Apr 18.


A deep learning based strategy for identifying and associating mitotic activity with gene expression derived risk categories in estrogen receptor positive breast cancers.

Romo-Bucheli D, Janowczyk A, Gilmore H, Romero E, Madabhushi A.

Cytometry A. 2017 Jun;91(6):566-573. doi: 10.1002/cyto.a.23065. Epub 2017 Feb 13.


A Deep Convolutional Neural Network for segmenting and classifying epithelial and stromal regions in histopathological images.

Xu J, Luo X, Wang G, Gilmore H, Madabhushi A.

Neurocomputing. 2016 May 26;191:214-223. doi: 10.1016/j.neucom.2016.01.034. Epub 2016 Feb 17.


In Reply.

Bomeisl PE, Gilmore HL.

Arch Pathol Lab Med. 2016 Nov;140(11):1185-1186. No abstract available.


Multi-Pass Adaptive Voting for Nuclei Detection in Histopathological Images.

Lu C, Xu H, Xu J, Gilmore H, Mandal M, Madabhushi A.

Sci Rep. 2016 Oct 3;6:33985. doi: 10.1038/srep33985.


c-Abl inhibits breast cancer tumorigenesis through reactivation of p53-mediated p21 expression.

Morrison CD, Allington TM, Thompson CL, Gilmore HL, Chang JC, Keri RA, Schiemann WP.

Oncotarget. 2016 Nov 8;7(45):72777-72794. doi: 10.18632/oncotarget.11909.


Automated Tubule Nuclei Quantification and Correlation with Oncotype DX risk categories in ER+ Breast Cancer Whole Slide Images.

Romo-Bucheli D, Janowczyk A, Gilmore H, Romero E, Madabhushi A.

Sci Rep. 2016 Sep 7;6:32706. doi: 10.1038/srep32706.


A Radio-genomics Approach for Identifying High Risk Estrogen Receptor-positive Breast Cancers on DCE-MRI: Preliminary Results in Predicting OncotypeDX Risk Scores.

Wan T, Bloch BN, Plecha D, Thompson CL, Gilmore H, Jaffe C, Harris L, Madabhushi A.

Sci Rep. 2016 Feb 18;6:21394. doi: 10.1038/srep21394.


Evaluation of short message service and peer navigation to improve engagement in HIV care in South Africa: study protocol for a three-arm cluster randomized controlled trial.

Lippman SA, Shade SB, Sumitani J, DeKadt J, Gilvydis JM, Ratlhagana MJ, Grignon J, Tumbo J, Gilmore H, Agnew E, Saberi P, Barnhart S, Steward WT.

Trials. 2016 Feb 6;17:68. doi: 10.1186/s13063-016-1190-y.


Immune Signatures Following Single Dose Trastuzumab Predict Pathologic Response to PreoperativeTrastuzumab and Chemotherapy in HER2-Positive Early Breast Cancer.

Varadan V, Gilmore H, Miskimen KL, Tuck D, Parsai S, Awadallah A, Krop IE, Winer EP, Bossuyt V, Somlo G, Abu-Khalaf MM, Fenton MA, Sikov W, Harris LN.

Clin Cancer Res. 2016 Jul 1;22(13):3249-59. doi: 10.1158/1078-0432.CCR-15-2021. Epub 2016 Feb 3.


Comparison of Oncotype DX Recurrence Score by Histologic Types of Breast Carcinoma.

Bomeisl PE, Thompson CL, Harris LN, Gilmore HL.

Arch Pathol Lab Med. 2015 Dec;139(12):1546-9. doi: 10.5858/arpa.2014-0557-OA.


Brief-exposure to preoperative bevacizumab reveals a TGF-β signature predictive of response in HER2-negative breast cancers.

Varadan V, Kamalakaran S, Gilmore H, Banerjee N, Janevski A, Miskimen KL, Williams N, Basavanhalli A, Madabhushi A, Lezon-Geyda K, Bossuyt V, Lannin DR, Abu-Khalaf M, Sikov W, Dimitrova N, Harris LN.

Int J Cancer. 2016 Feb 1;138(3):747-57. doi: 10.1002/ijc.29808. Epub 2015 Aug 31.


Stacked Sparse Autoencoder (SSAE) for Nuclei Detection on Breast Cancer Histopathology Images.

Xu J, Xiang L, Liu Q, Gilmore H, Wu J, Tang J, Madabhushi A.

IEEE Trans Med Imaging. 2016 Jan;35(1):119-30. doi: 10.1109/TMI.2015.2458702. Epub 2015 Jul 20.


Mitosis detection in breast cancer pathology images by combining handcrafted and convolutional neural network features.

Wang H, Cruz-Roa A, Basavanhally A, Gilmore H, Shih N, Feldman M, Tomaszewski J, Gonzalez F, Madabhushi A.

J Med Imaging (Bellingham). 2014 Oct;1(3):034003. doi: 10.1117/1.JMI.1.3.034003. Epub 2014 Oct 10.


In Reply.

Elliott RM, Shenk RR, Thompson CL, Gilmore HL.

Arch Pathol Lab Med. 2015 Jul;139(7):845-6. doi: 10.5858/arpa.2014-0530-LE. No abstract available.


Sparse Non-negative Matrix Factorization (SNMF) based color unmixing for breast histopathological image analysis.

Xu J, Xiang L, Wang G, Ganesan S, Feldman M, Shih NN, Gilmore H, Madabhushi A.

Comput Med Imaging Graph. 2015 Dec;46 Pt 1:20-29. doi: 10.1016/j.compmedimag.2015.04.002. Epub 2015 Apr 28.


Optimizing sparse sequencing of single cells for highly multiplex copy number profiling.

Baslan T, Kendall J, Ward B, Cox H, Leotta A, Rodgers L, Riggs M, D'Italia S, Sun G, Yong M, Miskimen K, Gilmore H, Saborowski M, Dimitrova N, Krasnitz A, Harris L, Wigler M, Hicks J.

Genome Res. 2015 May;25(5):714-24. doi: 10.1101/gr.188060.114. Epub 2015 Apr 9.


Amyloid-β precursor protein promotes cell proliferation and motility of advanced breast cancer.

Lim S, Yoo BK, Kim HS, Gilmore HL, Lee Y, Lee HP, Kim SJ, Letterio J, Lee HG.

BMC Cancer. 2014 Dec 10;14:928. doi: 10.1186/1471-2407-14-928.


UbcH7 regulates 53BP1 stability and DSB repair.

Han X, Zhang L, Chung J, Mayca Pozo F, Tran A, Seachrist DD, Jacobberger JW, Keri RA, Gilmore H, Zhang Y.

Proc Natl Acad Sci U S A. 2014 Dec 9;111(49):17456-61. doi: 10.1073/pnas.1408538111. Epub 2014 Nov 24.


Anatomical localization of progenitor cells in human breast tissue reveals enrichment of uncommitted cells within immature lobules.

Arendt LM, Keller PJ, Skibinski A, Goncalves K, Naber SP, Buchsbaum RJ, Gilmore H, Come SE, Kuperwasser C.

Breast Cancer Res. 2014 Oct 15;16(5):453. doi: 10.1186/s13058-014-0453-3.


Touch preparations for the intraoperative evaluation of sentinel lymph nodes after neoadjuvant therapy have high false-negative rates in patients with breast cancer.

Elliott RM, Shenk RR, Thompson CL, Gilmore HL.

Arch Pathol Lab Med. 2014 Jun;138(6):814-8. doi: 10.5858/arpa.2013-0281-OA.


Stress and the healthy adolescent brain: evidence for the neural embedding of life events.

Ganzel BL, Kim P, Gilmore H, Tottenham N, Temple E.

Dev Psychopathol. 2013 Nov;25(4 Pt 1):879-89. doi: 10.1017/S0954579413000242.


Participant experiences and facilitators and barriers to pill use among men who have sex with men in the iPrEx pre-exposure prophylaxis trial in San Francisco.

Gilmore HJ, Liu A, Koester KA, Amico KR, McMahan V, Goicochea P, Vargas L, Lubensky D, Buchbinder S, Grant R.

AIDS Patient Care STDS. 2013 Oct;27(10):560-6. doi: 10.1089/apc.2013.0116.


MUC1 is expressed at high frequency in early-stage basal-like triple-negative breast cancer.

Siroy A, Abdul-Karim FW, Miedler J, Fong N, Fu P, Gilmore H, Baar J.

Hum Pathol. 2013 Oct;44(10):2159-66. doi: 10.1016/j.humpath.2013.04.010. Epub 2013 Jul 8.

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