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Items: 1 to 50 of 77

1.

Genetic and historical evidence of common sawsharks Pristiophorus cirratus in the waters of southern Queensland.

Nevatte RJ, Wueringer BE, Gillings MR, Williamson JE.

J Fish Biol. 2019 Aug 16. doi: 10.1111/jfb.14122. [Epub ahead of print]

PMID:
31418822
2.

Catabolism of Nucleic Acids by a Cystic Fibrosis Pseudomonas aeruginosa Isolate: An Adaptive Pathway to Cystic Fibrosis Sputum Environment.

Kumar SS, Penesyan A, Elbourne LDH, Gillings MR, Paulsen IT.

Front Microbiol. 2019 May 31;10:1199. doi: 10.3389/fmicb.2019.01199. eCollection 2019.

3.

High diversity and rapid spatial turnover of integron gene cassettes in soil.

Ghaly TM, Geoghegan JL, Alroy J, Gillings MR.

Environ Microbiol. 2019 May;21(5):1567-1574. doi: 10.1111/1462-2920.14551. Epub 2019 Feb 15.

PMID:
30724441
4.

Microbial Genomes as Extension Packs for Macroorganismal Diversity: A Reply to Morimoto and Baltrus.

Carthey AJR, Gillings MR, Blumstein DT.

Trends Ecol Evol. 2019 Mar;34(3):188. doi: 10.1016/j.tree.2019.01.001. Epub 2019 Jan 24. No abstract available.

PMID:
30685189
5.

The Extended Genotype: Microbially Mediated Olfactory Communication.

Carthey AJR, Gillings MR, Blumstein DT.

Trends Ecol Evol. 2018 Nov;33(11):885-894. doi: 10.1016/j.tree.2018.08.010. Epub 2018 Sep 14. Review.

PMID:
30224089
6.

Pollutants That Replicate: Xenogenetic DNAs.

Gillings MR, Westoby M, Ghaly TM.

Trends Microbiol. 2018 Dec;26(12):975-977. doi: 10.1016/j.tim.2018.08.003. Epub 2018 Aug 28.

PMID:
30170783
7.

Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection.

Zhang AN, Li LG, Ma L, Gillings MR, Tiedje JM, Zhang T.

Microbiome. 2018 Jul 21;6(1):130. doi: 10.1186/s40168-018-0516-2.

8.

Correction to: Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China.

Su JQ, An XL, Li B, Chen QL, Gillings MR, Chen H, Zhang T, Zhu YG.

Microbiome. 2018 Jul 9;6(1):127. doi: 10.1186/s40168-018-0504-6.

9.

Mobile DNAs as Ecologically and Evolutionarily Independent Units of Life.

Ghaly TM, Gillings MR.

Trends Microbiol. 2018 Nov;26(11):904-912. doi: 10.1016/j.tim.2018.05.008. Epub 2018 Jun 7. Review.

PMID:
29885781
10.

Tracking antibiotic resistome during wastewater treatment using high throughput quantitative PCR.

An XL, Su JQ, Li B, Ouyang WY, Zhao Y, Chen QL, Cui L, Chen H, Gillings MR, Zhang T, Zhu YG.

Environ Int. 2018 Aug;117:146-153. doi: 10.1016/j.envint.2018.05.011. Epub 2018 May 9.

PMID:
29751164
11.

Impact of Wastewater Treatment on the Prevalence of Integrons and the Genetic Diversity of Integron Gene Cassettes.

An XL, Chen QL, Zhu D, Zhu YG, Gillings MR, Su JQ.

Appl Environ Microbiol. 2018 Apr 16;84(9). pii: e02766-17. doi: 10.1128/AEM.02766-17. Print 2018 May 1.

12.

Discovery of the fourth mobile sulfonamide resistance gene.

Razavi M, Marathe NP, Gillings MR, Flach CF, Kristiansson E, Joakim Larsson DG.

Microbiome. 2017 Dec 15;5(1):160. doi: 10.1186/s40168-017-0379-y.

13.

Corrigendum to "Chemical, biological, and DNA markers for tracing slaughterhouse effluent" [Environ. Res. 156 (2017) 534-541].

Harvey PJ, Taylor MP, Handley HK, Foster S, Gillings MR, Asher AJ.

Environ Res. 2018 Jan;160:568. doi: 10.1016/j.envres.2017.09.029. Epub 2017 Oct 6. No abstract available.

PMID:
28992941
14.

Metagenomics of urban sewage identifies an extensively shared antibiotic resistome in China.

Su JQ, An XL, Li B, Chen QL, Gillings MR, Chen H, Zhang T, Zhu YG.

Microbiome. 2017 Jul 19;5(1):84. doi: 10.1186/s40168-017-0298-y. Erratum in: Microbiome. 2018 Jul 9;6(1):127.

15.

Application of Struvite Alters the Antibiotic Resistome in Soil, Rhizosphere, and Phyllosphere.

Chen QL, An XL, Zhu YG, Su JQ, Gillings MR, Ye ZL, Cui L.

Environ Sci Technol. 2017 Jul 18;51(14):8149-8157. doi: 10.1021/acs.est.7b01420. Epub 2017 Jun 30. Erratum in: Environ Sci Technol. 2018 Dec 18;52(24):14564-14565.

PMID:
28628300
16.

Evolution of class 1 integrons: Mobilization and dispersal via food-borne bacteria.

Ghaly TM, Chow L, Asher AJ, Waldron LS, Gillings MR.

PLoS One. 2017 Jun 6;12(6):e0179169. doi: 10.1371/journal.pone.0179169. eCollection 2017.

17.

Chemical, biological, and DNA markers for tracing slaughterhouse effluent.

Harvey PJ, Taylor MP, Handley HK, Foster S, Gillings MR, Asher AJ.

Environ Res. 2017 Jul;156:534-541. doi: 10.1016/j.envres.2017.04.006. Epub 2017 Apr 26. Erratum in: Environ Res. 2018 Jan;160:568.

PMID:
28432993
18.

Class 1 integrons as invasive species.

Gillings MR.

Curr Opin Microbiol. 2017 Aug;38:10-15. doi: 10.1016/j.mib.2017.03.002. Epub 2017 Apr 14. Review.

PMID:
28414952
19.

Continental-scale pollution of estuaries with antibiotic resistance genes.

Zhu YG, Zhao Y, Li B, Huang CL, Zhang SY, Yu S, Chen YS, Zhang T, Gillings MR, Su JQ.

Nat Microbiol. 2017 Jan 30;2:16270. doi: 10.1038/nmicrobiol.2016.270.

PMID:
28134918
20.

Genomics and the evolution of antibiotic resistance.

Gillings MR, Paulsen IT, Tetu SG.

Ann N Y Acad Sci. 2017 Jan;1388(1):92-107. doi: 10.1111/nyas.13268. Epub 2016 Oct 21. Review.

PMID:
27768822
21.

Lateral gene transfer, bacterial genome evolution, and the Anthropocene.

Gillings MR.

Ann N Y Acad Sci. 2017 Feb;1389(1):20-36. doi: 10.1111/nyas.13213. Epub 2016 Oct 5. Review.

PMID:
27706829
22.

Escherichia coli out in the cold: Dissemination of human-derived bacteria into the Antarctic microbiome.

Power ML, Samuel A, Smith JJ, Stark JS, Gillings MR, Gordon DM.

Environ Pollut. 2016 Aug;215:58-65. doi: 10.1016/j.envpol.2016.04.013. Epub 2016 May 12.

PMID:
27179324
23.

Information in the Biosphere: Biological and Digital Worlds.

Gillings MR, Hilbert M, Kemp DJ.

Trends Ecol Evol. 2016 Mar;31(3):180-189. doi: 10.1016/j.tree.2015.12.013. Epub 2016 Jan 8.

PMID:
26777788
24.

Ecology and Evolution of the Human Microbiota: Fire, Farming and Antibiotics.

Gillings MR, Paulsen IT, Tetu SG.

Genes (Basel). 2015 Sep 8;6(3):841-57. doi: 10.3390/genes6030841. Review.

25.

Potential impacts of aquatic pollutants: sub-clinical antibiotic concentrations induce genome changes and promote antibiotic resistance.

Chow L, Waldron L, Gillings MR.

Front Microbiol. 2015 Aug 5;6:803. doi: 10.3389/fmicb.2015.00803. eCollection 2015.

26.

Screening Foodstuffs for Class 1 Integrons and Gene Cassettes.

Waldron LS, Gillings MR.

J Vis Exp. 2015 Jun 19;(100):e52889. doi: 10.3791/52889.

27.

Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution.

Gillings MR, Gaze WH, Pruden A, Smalla K, Tiedje JM, Zhu YG.

ISME J. 2015 Jun;9(6):1269-79. doi: 10.1038/ismej.2014.226. Epub 2014 Dec 12. Review.

28.

Were there evolutionary advantages to premenstrual syndrome?

Gillings MR.

Evol Appl. 2014 Sep;7(8):897-904. doi: 10.1111/eva.12190. Epub 2014 Aug 11.

29.

Integrons: past, present, and future.

Gillings MR.

Microbiol Mol Biol Rev. 2014 Jun;78(2):257-77. doi: 10.1128/MMBR.00056-13. Review.

30.

Rapid extraction of PCR-competent DNA from recalcitrant environmental samples.

Gillings MR.

Methods Mol Biol. 2014;1096:17-23. doi: 10.1007/978-1-62703-712-9_2.

PMID:
24515357
31.

DNA technology and evolution of the Central Dogma.

Gillings MR, Westoby M.

Trends Ecol Evol. 2014 Jan;29(1):1-2. doi: 10.1016/j.tree.2013.10.001. Epub 2013 Oct 19. No abstract available.

PMID:
24148293
32.

Population expansion and genetic structure in Carcharhinus brevipinna in the southern Indo-Pacific.

Geraghty PT, Williamson JE, Macbeth WG, Wintner SP, Harry AV, Ovenden JR, Gillings MR.

PLoS One. 2013 Sep 25;8(9):e75169. doi: 10.1371/journal.pone.0075169. eCollection 2013. Erratum in: PLoS One. 2014;9(4):e94738.

33.

Into the wild: dissemination of antibiotic resistance determinants via a species recovery program.

Power ML, Emery S, Gillings MR.

PLoS One. 2013 May 22;8(5):e63017. doi: 10.1371/journal.pone.0063017. Print 2013.

34.

Life in the dark: metagenomic evidence that a microbial slime community is driven by inorganic nitrogen metabolism.

Tetu SG, Breakwell K, Elbourne LD, Holmes AJ, Gillings MR, Paulsen IT.

ISME J. 2013 Jun;7(6):1227-36. doi: 10.1038/ismej.2013.14. Epub 2013 Feb 21.

35.

Evolutionary consequences of antibiotic use for the resistome, mobilome and microbial pangenome.

Gillings MR.

Front Microbiol. 2013 Jan 22;4:4. doi: 10.3389/fmicb.2013.00004. eCollection 2013.

36.

Individual variability in reproductive success determines winners and losers under ocean acidification: a case study with sea urchins.

Schlegel P, Havenhand JN, Gillings MR, Williamson JE.

PLoS One. 2012;7(12):e53118. doi: 10.1371/journal.pone.0053118. Epub 2012 Dec 27.

37.

Are humans increasing bacterial evolvability?

Gillings MR, Stokes HW.

Trends Ecol Evol. 2012 Jun;27(6):346-52. doi: 10.1016/j.tree.2012.02.006. Epub 2012 Mar 27. Review.

PMID:
22459247
38.

How evolution generates complexity without design: language as an instructional metaphor.

Gillings MR.

Evolution. 2012 Mar;66(3):617-622. doi: 10.1111/j.1558-5646.2011.01511.x. Epub 2011 Dec 6.

PMID:
22380427
39.

Heterogeneity of surface attached microbial communities from Sydney Harbour, Australia.

Wilson GS, Raftos DA, Gillings MR, Nair SV.

Mar Genomics. 2010 Jun;3(2):99-105. doi: 10.1016/j.margen.2010.08.001. Epub 2010 Sep 6.

PMID:
21798203
40.

Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens.

Stokes HW, Gillings MR.

FEMS Microbiol Rev. 2011 Sep;35(5):790-819. doi: 10.1111/j.1574-6976.2011.00273.x. Epub 2011 May 20. Review.

41.

Identification and differentiation of Cryptosporidium species by capillary electrophoresis single-strand conformation polymorphism.

Power ML, Holley M, Ryan UM, Worden P, Gillings MR.

FEMS Microbiol Lett. 2011 Jan;314(1):34-41. doi: 10.1111/j.1574-6968.2010.02134.x. Epub 2010 Nov 18.

42.

Preclinical class 1 integron with a complete Tn402-like transposition module.

Sajjad A, Holley MP, Labbate M, Stokes HW, Gillings MR.

Appl Environ Microbiol. 2011 Jan;77(1):335-7. doi: 10.1128/AEM.02142-10. Epub 2010 Oct 29.

43.

Proposal of Xanthomonas translucens pv. pistaciae pv. nov., pathogenic to pistachio (Pistacia vera).

Giblot-Ducray D, Marefat A, Gillings MR, Parkinson NM, Bowman JP, Ophel-Keller K, Taylor C, Facelli E, Scott ES.

Syst Appl Microbiol. 2009 Dec;32(8):549-57. doi: 10.1016/j.syapm.2009.08.001. Epub 2009 Sep 13.

PMID:
19748753
44.

Mobilization of a Tn402-like class 1 integron with a novel cassette array via flanking miniature inverted-repeat transposable element-like structures.

Gillings MR, Labbate M, Sajjad A, Giguère NJ, Holley MP, Stokes HW.

Appl Environ Microbiol. 2009 Sep;75(18):6002-4. doi: 10.1128/AEM.01033-09. Epub 2009 Jul 31.

45.

Evidence for dynamic exchange of qac gene cassettes between class 1 integrons and other integrons in freshwater biofilms.

Gillings MR, Holley MP, Stokes HW.

FEMS Microbiol Lett. 2009 Jun;296(2):282-8. doi: 10.1111/j.1574-6968.2009.01646.x. Epub 2009 May 8.

46.

ACID: annotation of cassette and integron data.

Joss MJ, Koenig JE, Labbate M, Polz MF, Gillings MR, Stokes HW, Doolittle WF, Boucher Y.

BMC Bioinformatics. 2009 Apr 21;10:118. doi: 10.1186/1471-2105-10-118.

47.

Cultivation of fastidious bacteria by viability staining and micromanipulation in a soil substrate membrane system.

Ferrari BC, Gillings MR.

Appl Environ Microbiol. 2009 May;75(10):3352-4. doi: 10.1128/AEM.02407-08. Epub 2009 Mar 20.

48.

Eimeria trichosuri: phylogenetic position of a marsupial coccidium, based on 18S rDNA sequences.

Power ML, Richter C, Emery S, Hufschmid J, Gillings MR.

Exp Parasitol. 2009 Jun;122(2):165-8. doi: 10.1016/j.exppara.2009.02.008. Epub 2009 Feb 25.

PMID:
19248779
49.

Terminal restriction fragment length polymorphism for identification of Cryptosporidium species in human feces.

Waldron LS, Ferrari BC, Gillings MR, Power ML.

Appl Environ Microbiol. 2009 Jan;75(1):108-12. doi: 10.1128/AEM.01341-08. Epub 2008 Oct 31.

50.

Gene cassettes encoding resistance to quaternary ammonium compounds: a role in the origin of clinical class 1 integrons?

Gillings MR, Xuejun D, Hardwick SA, Holley MP, Stokes HW.

ISME J. 2009 Feb;3(2):209-15. doi: 10.1038/ismej.2008.98. Epub 2008 Oct 16.

PMID:
18923456

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