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Items: 35

1.

Immunodominant IgE Epitopes of Der p 5 Allergen.

Lahiani S, Dumez ME, Bouaziz A, Djenouhat K, Khemili S, Bitam I, Gilis D, Galleni M.

Protein Pept Lett. 2018;25(11):1024-1034. doi: 10.2174/0929866525666181114144635.

PMID:
30430936
2.

Cross-Reactivity between Major IgE Epitopes of Family 5 Allergens from Dermatophagoides pteronyssinus and Blomia tropicalis.

Lahiani S, Dumez ME, Khemili S, Bitam I, Gilis D, Galleni M.

Int Arch Allergy Immunol. 2019;178(1):10-18. doi: 10.1159/000492871. Epub 2018 Oct 31.

PMID:
30380546
3.

Latvian registry of familial hypercholesterolemia: The first report of three-year results.

Latkovskis G, Saripo V, Gilis D, Nesterovics G, Upena-Roze A, Erglis A.

Atherosclerosis. 2018 Oct;277:347-354. doi: 10.1016/j.atherosclerosis.2018.06.011.

PMID:
30270070
4.

The house dust mite allergen Der p 5 binds lipid ligands and stimulates airway epithelial cells through a TLR2-dependent pathway.

Pulsawat P, Soongrung T, Satitsuksanoa P, Le Mignon M, Khemili S, Gilis D, Nony E, Kennedy MW, Jacquet A.

Clin Exp Allergy. 2019 Mar;49(3):378-390. doi: 10.1111/cea.13278. Epub 2018 Oct 12.

PMID:
30230051
5.

The Hidden Face of Rubisco.

Pottier M, Gilis D, Boutry M.

Trends Plant Sci. 2018 May;23(5):382-392. doi: 10.1016/j.tplants.2018.02.006. Epub 2018 Mar 7. Review.

PMID:
29525130
6.

Rational antibiotic design: in silico structural comparison of the functional cavities of penicillin-binding proteins and ß-lactamases.

Mbaye MN, Gilis D, Rooman M.

J Biomol Struct Dyn. 2019 Jan;37(1):65-74. doi: 10.1080/07391102.2017.1418678. Epub 2018 Jan 17.

PMID:
29251560
7.

Single Mutations in the Transmembrane Domains of Maize Plasma Membrane Aquaporins Affect the Activity of Monomers within a Heterotetramer.

Berny MC, Gilis D, Rooman M, Chaumont F.

Mol Plant. 2016 Jul 6;9(7):986-1003. doi: 10.1016/j.molp.2016.04.006. Epub 2016 Apr 19.

8.

The minor house dust mite allergen Der p 13 is a fatty acid-binding protein and an activator of a TLR2-mediated innate immune response.

Satitsuksanoa P, Kennedy M, Gilis D, Le Mignon M, Suratannon N, Soh WT, Wongpiyabovorn J, Chatchatee P, Vangveravong M, Rerkpattanapipat T, Sangasapaviliya A, Piboonpocanun S, Nony E, Ruxrungtham K, Jacquet A; Mite Allergy Research Cohort (MARC) study team.

Allergy. 2016 Oct;71(10):1425-34. doi: 10.1111/all.12899. Epub 2016 Apr 29.

PMID:
27018864
9.

Stability strengths and weaknesses in protein structures detected by statistical potentials: Application to bovine seminal ribonuclease.

De Laet M, Gilis D, Rooman M.

Proteins. 2016 Jan;84(1):143-58. doi: 10.1002/prot.24962. Epub 2015 Dec 9.

PMID:
26573727
10.

BeAtMuSiC: Prediction of changes in protein-protein binding affinity on mutations.

Dehouck Y, Kwasigroch JM, Rooman M, Gilis D.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W333-9. doi: 10.1093/nar/gkt450. Epub 2013 May 30.

11.

A conserved cysteine residue is involved in disulfide bond formation between plant plasma membrane aquaporin monomers.

Bienert GP, Cavez D, Besserer A, Berny MC, Gilis D, Rooman M, Chaumont F.

Biochem J. 2012 Jul 1;445(1):101-11. doi: 10.1042/BJ20111704.

PMID:
22506965
12.
13.

Flanking domain stability modulates the aggregation kinetics of a polyglutamine disease protein.

Saunders HM, Gilis D, Rooman M, Dehouck Y, Robertson AL, Bottomley SP.

Protein Sci. 2011 Oct;20(10):1675-81. doi: 10.1002/pro.698. Epub 2011 Aug 18.

14.

PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality.

Dehouck Y, Kwasigroch JM, Gilis D, Rooman M.

BMC Bioinformatics. 2011 May 13;12:151. doi: 10.1186/1471-2105-12-151.

15.

Evidence that interaction between conserved residues in transmembrane helices 2, 3, and 7 are crucial for human VPAC1 receptor activation.

Chugunov AO, Simms J, Poyner DR, Dehouck Y, Rooman M, Gilis D, Langer I.

Mol Pharmacol. 2010 Sep;78(3):394-401. doi: 10.1124/mol.110.063578. Epub 2010 Jun 23.

PMID:
20573782
16.

The first peptides: the evolutionary transition between prebiotic amino acids and early proteins.

van der Gulik P, Massar S, Gilis D, Buhrman H, Rooman M.

J Theor Biol. 2009 Dec 21;261(4):531-9. doi: 10.1016/j.jtbi.2009.09.004. Epub 2009 Sep 15.

PMID:
19761777
17.

Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0.

Dehouck Y, Grosfils A, Folch B, Gilis D, Bogaerts P, Rooman M.

Bioinformatics. 2009 Oct 1;25(19):2537-43. doi: 10.1093/bioinformatics/btp445. Epub 2009 Aug 3.

PMID:
19654118
18.

SODa: an Mn/Fe superoxide dismutase prediction and design server.

Kwasigroch JM, Wintjens R, Gilis D, Rooman M.

BMC Bioinformatics. 2008 Jun 2;9:257. doi: 10.1186/1471-2105-9-257.

19.
20.

Enhancing the stability and solubility of TEV protease using in silico design.

Cabrita LD, Gilis D, Robertson AL, Dehouck Y, Rooman M, Bottomley SP.

Protein Sci. 2007 Nov;16(11):2360-7. Epub 2007 Sep 28.

22.
23.

A new generation of statistical potentials for proteins.

Dehouck Y, Gilis D, Rooman M.

Biophys J. 2006 Jun 1;90(11):4010-7. Epub 2006 Mar 13.

24.
25.

Protein decoy sets for evaluating energy functions.

Gilis D.

J Biomol Struct Dyn. 2004 Jun;21(6):725-36. Review.

PMID:
15106995
26.

Sequence-structure signals of 3D domain swapping in proteins.

Dehouck Y, Biot C, Gilis D, Kwasigroch JM, Rooman M.

J Mol Biol. 2003 Jul 25;330(5):1215-25.

PMID:
12860140
27.

In vitro and in silico design of alpha1-antitrypsin mutants with different conformational stabilities.

Gilis D, McLennan HR, Dehouck Y, Cabrita LD, Rooman M, Bottomley SP.

J Mol Biol. 2003 Jan 17;325(3):581-9.

PMID:
12498804
28.

PoPMuSiC, rationally designing point mutations in protein structures.

Kwasigroch JM, Gilis D, Dehouck Y, Rooman M.

Bioinformatics. 2002 Dec;18(12):1701-2.

PMID:
12490462
29.

What is paradoxical about Levinthal paradox?

Rooman M, Dehouck Y, Kwasigroch JM, Biot C, Gilis D.

J Biomol Struct Dyn. 2002 Dec;20(3):327-9.

PMID:
12437370
30.

Optimality of the genetic code with respect to protein stability and amino-acid frequencies.

Gilis D, Massar S, Cerf NJ, Rooman M.

Genome Biol. 2001;2(11):RESEARCH0049. Epub 2001 Oct 24.

31.
32.

Identification and ab initio simulations of early folding units in proteins.

Gilis D, Rooman M.

Proteins. 2001 Feb 1;42(2):164-76.

PMID:
11119640
35.

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