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Items: 1 to 50 of 285

1.

Plasmodium vivax Malaria viewed through the lens of an eradicated European strain.

van Dorp L, Gelabert P, Rieux A, de Manuel M, de-Dios T, Gopalakrishnan S, Carøe C, Sandoval-Velasco M, Fregel R, Olalde I, Escosa R, Aranda C, Huijben S, Mueller I, Marquès-Bonet T, Balloux F, Gilbert MTP, Lalueza-Fox C.

Mol Biol Evol. 2019 Nov 7. pii: msz264. doi: 10.1093/molbev/msz264. [Epub ahead of print]

PMID:
31697387
2.

Resolving a clinical tuberculosis outbreak using palaeogenomic genome reconstruction methodologies.

Jones R, Velasco MS, Harris LG, Morgan S, Temple M, Ruddy MC, Williams R, Perry MD, Hitchings M, Wilkinson TS, Humphrey T, Gilbert MTP, Davies AP.

Tuberculosis (Edinb). 2019 Sep 23;119:101865. doi: 10.1016/j.tube.2019.101865. [Epub ahead of print]

PMID:
31563810
3.

High-coverage genomes to elucidate the evolution of penguins.

Pan H, Cole TL, Bi X, Fang M, Zhou C, Yang Z, Ksepka DT, Hart T, Bouzat JL, Argilla LS, Bertelsen MF, Boersma PD, Bost CA, Cherel Y, Dann P, Fiddaman SR, Howard P, Labuschagne K, Mattern T, Miller G, Parker P, Phillips RA, Quillfeldt P, Ryan PG, Taylor H, Thompson DR, Young MJ, Ellegaard MR, Gilbert MTP, Sinding MS, Pacheco G, Shepherd LD, Tennyson AJD, Grosser S, Kay E, Nupen LJ, Ellenberg U, Houston DM, Reeve AH, Johnson K, Masello JF, Stracke T, McKinlay B, Borboroglu PG, Zhang DX, Zhang G.

Gigascience. 2019 Sep 1;8(9). pii: giz117. doi: 10.1093/gigascience/giz117.

PMID:
31531675
4.

Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny.

Cappellini E, Welker F, Pandolfi L, Ramos-Madrigal J, Samodova D, Rüther PL, Fotakis AK, Lyon D, Moreno-Mayar JV, Bukhsianidze M, Rakownikow Jersie-Christensen R, Mackie M, Ginolhac A, Ferring R, Tappen M, Palkopoulou E, Dickinson MR, Stafford TW Jr, Chan YL, Götherström A, Nathan SKSS, Heintzman PD, Kapp JD, Kirillova I, Moodley Y, Agusti J, Kahlke RD, Kiladze G, Martínez-Navarro B, Liu S, Sandoval Velasco M, Sinding MS, Kelstrup CD, Allentoft ME, Orlando L, Penkman K, Shapiro B, Rook L, Dalén L, Gilbert MTP, Olsen JV, Lordkipanidze D, Willerslev E.

Nature. 2019 Oct;574(7776):103-107. doi: 10.1038/s41586-019-1555-y. Epub 2019 Sep 11.

PMID:
31511700
5.

Genetic affinities of an eradicated European Plasmodium falciparum strain.

de-Dios T, van Dorp L, Gelabert P, Carøe C, Sandoval-Velasco M, Fregel R, Escosa R, Aranda C, Huijben S, Balloux F, Gilbert MTP, Lalueza-Fox C.

Microb Genom. 2019 Sep;5(9). doi: 10.1099/mgen.0.000289. Epub 2019 Aug 20.

6.

Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe.

Frantz LAF, Haile J, Lin AT, Scheu A, Geörg C, Benecke N, Alexander M, Linderholm A, Mullin VE, Daly KG, Battista VM, Price M, Gron KJ, Alexandri P, Arbogast RM, Arbuckle B, Bӑlӑşescu A, Barnett R, Bartosiewicz L, Baryshnikov G, Bonsall C, Borić D, Boroneanţ A, Bulatović J, Çakirlar C, Carretero JM, Chapman J, Church M, Crooijmans R, De Cupere B, Detry C, Dimitrijevic V, Dumitraşcu V, du Plessis L, Edwards CJ, Erek CM, Erim-Özdoğan A, Ervynck A, Fulgione D, Gligor M, Götherström A, Gourichon L, Groenen MAM, Helmer D, Hongo H, Horwitz LK, Irving-Pease EK, Lebrasseur O, Lesur J, Malone C, Manaseryan N, Marciniak A, Martlew H, Mashkour M, Matthews R, Matuzeviciute GM, Maziar S, Meijaard E, McGovern T, Megens HJ, Miller R, Mohaseb AF, Orschiedt J, Orton D, Papathanasiou A, Pearson MP, Pinhasi R, Radmanović D, Ricaut FX, Richards M, Sabin R, Sarti L, Schier W, Sheikhi S, Stephan E, Stewart JR, Stoddart S, Tagliacozzo A, Tasić N, Trantalidou K, Tresset A, Valdiosera C, van den Hurk Y, Van Poucke S, Vigne JD, Yanevich A, Zeeb-Lanz A, Triantafyllidis A, Gilbert MTP, Schibler J, Rowley-Conwy P, Zeder M, Peters J, Cucchi T, Bradley DG, Dobney K, Burger J, Evin A, Girdland-Flink L, Larson G.

Proc Natl Acad Sci U S A. 2019 Aug 27;116(35):17231-17238. doi: 10.1073/pnas.1901169116. Epub 2019 Aug 12.

7.

Avian Binocularity and Adaptation to Nocturnal Environments: Genomic Insights from a Highly Derived Visual Phenotype.

Borges R, Fonseca J, Gomes C, Johnson WE, O'Brien SJ, Zhang G, Gilbert MTP, Jarvis ED, Antunes A.

Genome Biol Evol. 2019 Aug 1;11(8):2244-2255. doi: 10.1093/gbe/evz111.

8.

Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survival.

Smith O, Dunshea G, Sinding MS, Fedorov S, Germonpre M, Bocherens H, Gilbert MTP.

PLoS Biol. 2019 Jul 30;17(7):e3000166. doi: 10.1371/journal.pbio.3000166. eCollection 2019 Jul.

9.

31° South: The physiology of adaptation to arid conditions in a passerine bird.

Ribeiro ÂM, Puetz L, Pattinson NB, Dalén L, Deng Y, Zhang G, da Fonseca RR, Smit B, Gilbert MTP.

Mol Ecol. 2019 Aug;28(16):3709-3721. doi: 10.1111/mec.15176. Epub 2019 Aug 6.

PMID:
31291502
10.

Biological adaptations in the Arctic cervid, the reindeer (Rangifer tarandus).

Lin Z, Chen L, Chen X, Zhong Y, Yang Y, Xia W, Liu C, Zhu W, Wang H, Yan B, Yang Y, Liu X, Sternang Kvie K, Røed KH, Wang K, Xiao W, Wei H, Li G, Heller R, Gilbert MTP, Qiu Q, Wang W, Li Z.

Science. 2019 Jun 21;364(6446). pii: eaav6312. doi: 10.1126/science.aav6312.

PMID:
31221829
11.

Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits.

Chen L, Qiu Q, Jiang Y, Wang K, Lin Z, Li Z, Bibi F, Yang Y, Wang J, Nie W, Su W, Liu G, Li Q, Fu W, Pan X, Liu C, Yang J, Zhang C, Yin Y, Wang Y, Zhao Y, Zhang C, Wang Z, Qin Y, Liu W, Wang B, Ren Y, Zhang R, Zeng Y, da Fonseca RR, Wei B, Li R, Wan W, Zhao R, Zhu W, Wang Y, Duan S, Gao Y, Zhang YE, Chen C, Hvilsom C, Epps CW, Chemnick LG, Dong Y, Mirarab S, Siegismund HR, Ryder OA, Gilbert MTP, Lewin HA, Zhang G, Heller R, Wang W.

Science. 2019 Jun 21;364(6446). pii: eaav6202. doi: 10.1126/science.aav6202.

PMID:
31221828
12.

Postglacial Colonization of Northern Coastal Habitat by Bottlenose Dolphins: A Marine Leading-Edge Expansion?

Nykänen M, Kaschner K, Dabin W, Brownlow A, Davison NJ, Deaville R, Garilao C, Kesner-Reyes K, Gilbert MTP, Penrose R, Islas-Villanueva V, Wales N, Ingram SN, Rogan E, Louis M, Foote AD.

J Hered. 2019 Oct 10;110(6):662-674. doi: 10.1093/jhered/esz039.

PMID:
31211393
13.

Palaeogenomic insights into the origins of French grapevine diversity.

Ramos-Madrigal J, Runge AKW, Bouby L, Lacombe T, Samaniego Castruita JA, Adam-Blondon AF, Figueiral I, Hallavant C, Martínez-Zapater JM, Schaal C, Töpfer R, Petersen B, Sicheritz-Pontén T, This P, Bacilieri R, Gilbert MTP, Wales N.

Nat Plants. 2019 Jun;5(6):595-603. doi: 10.1038/s41477-019-0437-5. Epub 2019 Jun 10.

PMID:
31182840
14.

Killer whale genomes reveal a complex history of recurrent admixture and vicariance.

Foote AD, Martin MD, Louis M, Pacheco G, Robertson KM, Sinding MS, Amaral AR, Baird RW, Baker CS, Ballance L, Barlow J, Brownlow A, Collins T, Constantine R, Dabin W, Dalla Rosa L, Davison NJ, Durban JW, Esteban R, Ferguson SH, Gerrodette T, Guinet C, Hanson MB, Hoggard W, Matthews CJD, Samarra FIP, de Stephanis R, Tavares SB, Tixier P, Totterdell JA, Wade P, Excoffier L, Gilbert MTP, Wolf JBW, Morin PA.

Mol Ecol. 2019 Jul;28(14):3427-3444. doi: 10.1111/mec.15099. Epub 2019 May 27.

PMID:
31131963
15.

DNA metabarcoding-Need for robust experimental designs to draw sound ecological conclusions.

Zinger L, Bonin A, Alsos IG, Bálint M, Bik H, Boyer F, Chariton AA, Creer S, Coissac E, Deagle BE, De Barba M, Dickie IA, Dumbrell AJ, Ficetola GF, Fierer N, Fumagalli L, Gilbert MTP, Jarman S, Jumpponen A, Kauserud H, Orlando L, Pansu J, Pawlowski J, Tedersoo L, Thomsen PF, Willerslev E, Taberlet P.

Mol Ecol. 2019 Apr;28(8):1857-1862. doi: 10.1111/mec.15060. Epub 2019 Apr 29. No abstract available.

16.

Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must.

Sirén K, Mak SST, Melkonian C, Carøe C, Swiegers JH, Molenaar D, Fischer U, Gilbert MTP.

Front Microbiol. 2019 Apr 9;10:697. doi: 10.3389/fmicb.2019.00697. eCollection 2019.

17.

A guide to the application of Hill numbers to DNA-based diversity analyses.

Alberdi A, Gilbert MTP.

Mol Ecol Resour. 2019 Jul;19(4):804-817. doi: 10.1111/1755-0998.13014. Epub 2019 May 5. Review.

PMID:
30947383
18.

Diabetic cats have decreased gut microbial diversity and a lack of butyrate producing bacteria.

Kieler IN, Osto M, Hugentobler L, Puetz L, Gilbert MTP, Hansen T, Pedersen O, Reusch CE, Zini E, Lutz TA, Bjørnvad CR.

Sci Rep. 2019 Mar 18;9(1):4822. doi: 10.1038/s41598-019-41195-0.

19.

A comparison of storage methods for gut microbiome studies in teleosts: Insights from rainbow trout (Oncorhynchus mykiss).

Hildonen M, Kodama M, Puetz LC, Gilbert MTP, Limborg MT.

J Microbiol Methods. 2019 May;160:42-48. doi: 10.1016/j.mimet.2019.03.010. Epub 2019 Mar 16.

PMID:
30885689
20.

DNA Extraction from Keratin and Chitin.

Campos PF, Gilbert MTP.

Methods Mol Biol. 2019;1963:57-63. doi: 10.1007/978-1-4939-9176-1_7.

PMID:
30875044
21.

Parallel adaptation of rabbit populations to myxoma virus.

Alves JM, Carneiro M, Cheng JY, Lemos de Matos A, Rahman MM, Loog L, Campos PF, Wales N, Eriksson A, Manica A, Strive T, Graham SC, Afonso S, Bell DJ, Belmont L, Day JP, Fuller SJ, Marchandeau S, Palmer WJ, Queney G, Surridge AK, Vieira FG, McFadden G, Nielsen R, Gilbert MTP, Esteves PJ, Ferrand N, Jiggins FM.

Science. 2019 Mar 22;363(6433):1319-1326. doi: 10.1126/science.aau7285. Epub 2019 Feb 14.

22.

Mitogenomic evidence of close relationships between New Zealand's extinct giant raptors and small-sized Australian sister-taxa.

Knapp M, Thomas JE, Haile J, Prost S, Ho SYW, Dussex N, Cameron-Christie S, Kardailsky O, Barnett R, Bunce M, Gilbert MTP, Scofield RP.

Mol Phylogenet Evol. 2019 May;134:122-128. doi: 10.1016/j.ympev.2019.01.026. Epub 2019 Feb 10.

PMID:
30753886
23.

The Genomic Footprints of the Fall and Recovery of the Crested Ibis.

Feng S, Fang Q, Barnett R, Li C, Han S, Kuhlwilm M, Zhou L, Pan H, Deng Y, Chen G, Gamauf A, Woog F, Prys-Jones R, Marques-Bonet T, Gilbert MTP, Zhang G.

Curr Biol. 2019 Jan 21;29(2):340-349.e7. doi: 10.1016/j.cub.2018.12.008. Epub 2019 Jan 10.

24.

Ancient DNA reveals the timing and persistence of organellar genetic bottlenecks over 3,000 years of sunflower domestication and improvement.

Wales N, Akman M, Watson RHB, Sánchez Barreiro F, Smith BD, Gremillion KJ, Gilbert MTP, Blackman BK.

Evol Appl. 2018 Feb 13;12(1):38-53. doi: 10.1111/eva.12594. eCollection 2019 Jan.

25.

MobiSeq: De novo SNP discovery in model and non-model species through sequencing the flanking region of transposable elements.

Rey-Iglesia A, Gopalakrishan S, Carøe C, Alquezar-Planas DE, Ahlmann Nielsen A, Röder T, Bruhn Pedersen L, Naesborg-Nielsen C, Sinding MS, Fredensborg Rath M, Li Z, Petersen B, Gilbert MTP, Bunce M, Mourier T, Hansen AJ.

Mol Ecol Resour. 2019 Mar;19(2):512-525. doi: 10.1111/1755-0998.12984. Epub 2019 Feb 6.

PMID:
30575257
26.

Multiproxy evidence highlights a complex evolutionary legacy of maize in South America.

Kistler L, Maezumi SY, Gregorio de Souza J, Przelomska NAS, Malaquias Costa F, Smith O, Loiselle H, Ramos-Madrigal J, Wales N, Ribeiro ER, Morrison RR, Grimaldo C, Prous AP, Arriaza B, Gilbert MTP, de Oliveira Freitas F, Allaby RG.

Science. 2018 Dec 14;362(6420):1309-1313. doi: 10.1126/science.aav0207.

PMID:
30545889
27.

Erratum to: Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.

Mak SST, Gopalakrishnan S, Carøe C, Geng C, Liu S, Sinding MS, Kuderna LFK, Zhang W, Fu S, Vieira FG, Germonpré M, Bocherens H, Fedorov S, Petersen B, Sicheritz-Pontén T, Marques-Bonet T, Zhang G, Jiang H, Gilbert MTP.

Gigascience. 2018 Dec 1;7(12). doi: 10.1093/gigascience/giy151. No abstract available.

28.

Multi-omics and potential applications in wine production.

Sirén K, Mak SST, Fischer U, Hansen LH, Gilbert MTP.

Curr Opin Biotechnol. 2019 Apr;56:172-178. doi: 10.1016/j.copbio.2018.11.014. Epub 2018 Dec 11. Review.

PMID:
30530242
29.

Population genomics of grey wolves and wolf-like canids in North America.

Sinding MS, Gopalakrishan S, Vieira FG, Samaniego Castruita JA, Raundrup K, Heide Jørgensen MP, Meldgaard M, Petersen B, Sicheritz-Ponten T, Mikkelsen JB, Marquard-Petersen U, Dietz R, Sonne C, Dalén L, Bachmann L, Wiig Ø, Hansen AJ, Gilbert MTP.

PLoS Genet. 2018 Nov 12;14(11):e1007745. doi: 10.1371/journal.pgen.1007745. eCollection 2018 Nov.

30.

Identification of transcription factor genes involved in anthocyanin biosynthesis in carrot (Daucus carota L.) using RNA-Seq.

Kodama M, Brinch-Pedersen H, Sharma S, Holme IB, Joernsgaard B, Dzhanfezova T, Amby DB, Vieira FG, Liu S, Gilbert MTP.

BMC Genomics. 2018 Nov 8;19(1):811. doi: 10.1186/s12864-018-5135-6.

31.

Promises and pitfalls of using high-throughput sequencing for diet analysis.

Alberdi A, Aizpurua O, Bohmann K, Gopalakrishnan S, Lynggaard C, Nielsen M, Gilbert MTP.

Mol Ecol Resour. 2019 Mar;19(2):327-348. doi: 10.1111/1755-0998.12960. Epub 2018 Nov 22. Review.

PMID:
30358108
32.

Interspecific Gene Flow Shaped the Evolution of the Genus Canis.

Gopalakrishnan S, Sinding MS, Ramos-Madrigal J, Niemann J, Samaniego Castruita JA, Vieira FG, Carøe C, Montero MM, Kuderna L, Serres A, González-Basallote VM, Liu YH, Wang GD, Marques-Bonet T, Mirarab S, Fernandes C, Gaubert P, Koepfli KP, Budd J, Rueness EK, Sillero C, Heide-Jørgensen MP, Petersen B, Sicheritz-Ponten T, Bachmann L, Wiig Ø, Hansen AJ, Gilbert MTP.

Curr Biol. 2018 Nov 5;28(21):3441-3449.e5. doi: 10.1016/j.cub.2018.08.041. Epub 2018 Oct 18.

33.

Protective role of the vulture facial skin and gut microbiomes aid adaptation to scavenging.

Zepeda Mendoza ML, Roggenbuck M, Manzano Vargas K, Hansen LH, Brunak S, Gilbert MTP, Sicheritz-Pontén T.

Acta Vet Scand. 2018 Oct 11;60(1):61. doi: 10.1186/s13028-018-0415-3.

34.

Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo.

Drinkwater R, Schnell IB, Bohmann K, Bernard H, Veron G, Clare E, Gilbert MTP, Rossiter SJ.

Mol Ecol Resour. 2019 Jan;19(1):105-117. doi: 10.1111/1755-0998.12943. Epub 2018 Oct 16.

PMID:
30225935
35.

Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin.

Hooper R, Brealey JC, van der Valk T, Alberdi A, Durban JW, Fearnbach H, Robertson KM, Baird RW, Bradley Hanson M, Wade P, Gilbert MTP, Morin PA, Wolf JBW, Foote AD, Guschanski K.

Mol Ecol. 2019 Jan;28(2):484-502. doi: 10.1111/mec.14860. Epub 2018 Oct 24.

36.

Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia.

Zhou Z, Lundstrøm I, Tran-Dien A, Duchêne S, Alikhan NF, Sergeant MJ, Langridge G, Fotakis AK, Nair S, Stenøien HK, Hamre SS, Casjens S, Christophersen A, Quince C, Thomson NR, Weill FX, Ho SYW, Gilbert MTP, Achtman M.

Curr Biol. 2018 Aug 6;28(15):2420-2428.e10. doi: 10.1016/j.cub.2018.05.058. Epub 2018 Jul 19.

37.

The evolutionary history of dogs in the Americas.

Ní Leathlobhair M, Perri AR, Irving-Pease EK, Witt KE, Linderholm A, Haile J, Lebrasseur O, Ameen C, Blick J, Boyko AR, Brace S, Cortes YN, Crockford SJ, Devault A, Dimopoulos EA, Eldridge M, Enk J, Gopalakrishnan S, Gori K, Grimes V, Guiry E, Hansen AJ, Hulme-Beaman A, Johnson J, Kitchen A, Kasparov AK, Kwon YM, Nikolskiy PA, Lope CP, Manin A, Martin T, Meyer M, Myers KN, Omura M, Rouillard JM, Pavlova EY, Sciulli P, Sinding MS, Strakova A, Ivanova VV, Widga C, Willerslev E, Pitulko VV, Barnes I, Gilbert MTP, Dobney KM, Malhi RS, Murchison EP, Larson G, Frantz LAF.

Science. 2018 Jul 6;361(6397):81-85. doi: 10.1126/science.aao4776.

PMID:
29976825
38.

Greenland sled dogs at risk of extinction.

Sonne C, Langebæk R, Dietz R, Andersen-Ranberg E, Houser G, Hansen AJ, Sinding MS, Olsen MT, Egevang C, Gilbert MTP, Meldgaard M.

Science. 2018 Jun 8;360(6393):1080. doi: 10.1126/science.aat9578. No abstract available.

PMID:
29880678
39.

Debugging diversity - a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool.

Schnell IB, Bohmann K, Schultze SE, Richter SR, Murray DC, Sinding MS, Bass D, Cadle JE, Campbell MJ, Dolch R, Edwards DP, Gray TNE, Hansen T, Hoa ANQ, Noer CL, Heise-Pavlov S, Sander Pedersen AF, Ramamonjisoa JC, Siddall ME, Tilker A, Traeholt C, Wilkinson N, Woodcock P, Yu DW, Bertelsen MF, Bunce M, Gilbert MTP.

Mol Ecol Resour. 2018 Nov;18(6):1282-1298. doi: 10.1111/1755-0998.12912. Epub 2018 Jul 5.

PMID:
29877042
40.

Ancient genomes from Iceland reveal the making of a human population.

Ebenesersdóttir SS, Sandoval-Velasco M, Gunnarsdóttir ED, Jagadeesan A, Guðmundsdóttir VB, Thordardóttir EL, Einarsdóttir MS, Moore KHS, Sigurðsson Á, Magnúsdóttir DN, Jónsson H, Snorradóttir S, Hovig E, Møller P, Kockum I, Olsson T, Alfredsson L, Hansen TF, Werge T, Cavalleri GL, Gilbert E, Lalueza-Fox C, Walser JW 3rd, Kristjánsdóttir S, Gopalakrishnan S, Árnadóttir L, Magnússon ÓÞ, Gilbert MTP, Stefánsson K, Helgason A.

Science. 2018 Jun 1;360(6392):1028-1032. doi: 10.1126/science.aar2625.

PMID:
29853688
41.

Recent Asian origin of chytrid fungi causing global amphibian declines.

O'Hanlon SJ, Rieux A, Farrer RA, Rosa GM, Waldman B, Bataille A, Kosch TA, Murray KA, Brankovics B, Fumagalli M, Martin MD, Wales N, Alvarado-Rybak M, Bates KA, Berger L, Böll S, Brookes L, Clare F, Courtois EA, Cunningham AA, Doherty-Bone TM, Ghosh P, Gower DJ, Hintz WE, Höglund J, Jenkinson TS, Lin CF, Laurila A, Loyau A, Martel A, Meurling S, Miaud C, Minting P, Pasmans F, Schmeller DS, Schmidt BR, Shelton JMG, Skerratt LF, Smith F, Soto-Azat C, Spagnoletti M, Tessa G, Toledo LF, Valenzuela-Sánchez A, Verster R, Vörös J, Webb RJ, Wierzbicki C, Wombwell E, Zamudio KR, Aanensen DM, James TY, Gilbert MTP, Weldon C, Bosch J, Balloux F, Garner TWJ, Fisher MC.

Science. 2018 May 11;360(6389):621-627. doi: 10.1126/science.aar1965.

42.

Mind the gut: genomic insights to population divergence and gut microbial composition of two marine keystone species.

Fietz K, Rye Hintze CO, Skovrind M, Kjærgaard Nielsen T, Limborg MT, Krag MA, Palsbøll PJ, Hestbjerg Hansen L, Rask Møller P, Gilbert MTP.

Microbiome. 2018 May 2;6(1):82. doi: 10.1186/s40168-018-0467-7.

43.

Earth BioGenome Project: Sequencing life for the future of life.

Lewin HA, Robinson GE, Kress WJ, Baker WJ, Coddington J, Crandall KA, Durbin R, Edwards SV, Forest F, Gilbert MTP, Goldstein MM, Grigoriev IV, Hackett KJ, Haussler D, Jarvis ED, Johnson WE, Patrinos A, Richards S, Castilla-Rubio JC, van Sluys MA, Soltis PS, Xu X, Yang H, Zhang G.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4325-4333. doi: 10.1073/pnas.1720115115.

44.

Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure.

Bohmann K, Gopalakrishnan S, Nielsen M, Nielsen LDSB, Jones G, Streicker DG, Gilbert MTP.

Mol Ecol Resour. 2018 Apr 19. doi: 10.1111/1755-0998.12891. [Epub ahead of print]

45.

Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia).

Holt C, Campbell M, Keays DA, Edelman N, Kapusta A, Maclary E, T Domyan E, Suh A, Warren WC, Yandell M, Gilbert MTP, Shapiro MD.

G3 (Bethesda). 2018 May 4;8(5):1391-1398. doi: 10.1534/g3.117.300443.

46.

Applied Hologenomics: Feasibility and Potential in Aquaculture.

Limborg MT, Alberdi A, Kodama M, Roggenbuck M, Kristiansen K, Gilbert MTP.

Trends Biotechnol. 2018 Mar;36(3):252-264. doi: 10.1016/j.tibtech.2017.12.006. Epub 2018 Jan 31. Review.

PMID:
29395346
47.

Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding.

Aizpurua O, Budinski I, Georgiakakis P, Gopalakrishnan S, Ibañez C, Mata V, Rebelo H, Russo D, Szodoray-Parádi F, Zhelyazkova V, Zrncic V, Gilbert MTP, Alberdi A.

Mol Ecol. 2018 Feb;27(3):815-825. doi: 10.1111/mec.14474. Epub 2018 Jan 31.

PMID:
29290102
48.

Quantifying Temporal Genomic Erosion in Endangered Species.

Díez-Del-Molino D, Sánchez-Barreiro F, Barnes I, Gilbert MTP, Dalén L.

Trends Ecol Evol. 2018 Mar;33(3):176-185. doi: 10.1016/j.tree.2017.12.002. Epub 2017 Dec 27.

PMID:
29289355
49.

No longer locally extinct? Tracing the origins of a lion (Panthera leo) living in Gabon.

Barnett R, Sinding MS, Vieira FG, Mendoza MLZ, Bonnet M, Araldi A, Kienast I, Zambarda A, Yamaguchi N, Henschel P, Gilbert MTP.

Conserv Genet. 2018;19(3):611-618. doi: 10.1007/s10592-017-1039-2. Epub 2018 Feb 1.

50.

Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for All Living Bat Species.

Teeling EC, Vernes SC, Dávalos LM, Ray DA, Gilbert MTP, Myers E; Bat1K Consortium.

Annu Rev Anim Biosci. 2018 Feb 15;6:23-46. doi: 10.1146/annurev-animal-022516-022811. Epub 2017 Nov 20. Review.

PMID:
29166127

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