Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 61

1.

Dietary Fatty Acids and Host-Microbial Crosstalk in Neonatal Enteric Infection.

Quin C, Gibson DL.

Nutrients. 2019 Sep 3;11(9). pii: E2064. doi: 10.3390/nu11092064. Review.

2.

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG.

Nat Biotechnol. 2019 Sep;37(9):1091. doi: 10.1038/s41587-019-0252-6.

PMID:
31399723
3.

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG.

Nat Biotechnol. 2019 Aug;37(8):852-857. doi: 10.1038/s41587-019-0209-9. No abstract available. Erratum in: Nat Biotechnol. 2019 Sep;37(9):1091.

PMID:
31341288
4.

TLR9 limits enteric antimicrobial responses and promotes microbiota-based colonisation resistance during Citrobacter rodentium infection.

Yang H, Yu HB, Bhinder G, Ryz NR, Lee J, Yang H, Fotovati A, Gibson DL, Turvey SE, Reid GS, Vallance BA.

Cell Microbiol. 2019 Jul;21(7):e13026. doi: 10.1111/cmi.13026. Epub 2019 May 7.

PMID:
30893495
5.

Gut Mucosal Proteins and Bacteriome Are Shaped by the Saturation Index of Dietary Lipids.

Abulizi N, Quin C, Brown K, Chan YK, Gill SK, Gibson DL.

Nutrients. 2019 Feb 16;11(2). pii: E418. doi: 10.3390/nu11020418.

6.

Obesogenic diet in aging mice disrupts gut microbe composition and alters neutrophil:lymphocyte ratio, leading to inflamed milieu in acute heart failure.

Kain V, Van Der Pol W, Mariappan N, Ahmad A, Eipers P, Gibson DL, Gladine C, Vigor C, Durand T, Morrow C, Halade GV.

FASEB J. 2019 May;33(5):6456-6469. doi: 10.1096/fj.201802477R. Epub 2019 Feb 15.

PMID:
30768364
7.

Effects of Azithromycin on Behavior, Pathologic Signs, and Changes in Cytokines, Chemokines, and Neutrophil Migration in C57BL/6 Mice Exposed to Dextran Sulfate Sodium.

Anderson SJ, Lockhart JS, Estaki M, Quin C, Hirota SA, Alston L, Buret AG, Hancock TM, Petri B, Gibson DL, Morck DW.

Comp Med. 2019 Feb 1;69(1):4-15. doi: 10.30802/AALAS-CM-18-000001. Epub 2018 Dec 13.

8.

H2Oh No! The importance of reporting your water source in your in vivo microbiome studies.

Barnett JA, Gibson DL.

Gut Microbes. 2019;10(3):261-269. doi: 10.1080/19490976.2018.1539599. Epub 2018 Nov 15.

9.

EVALUATION OF QUALITY OF LIFE IN PATIENTS TREATED FOR METASTATIC DISEASE OF THE PROXIMAL FEMUR.

Tanaka MH, de Souza MM, Gibson DLC, Nogueira MP.

Acta Ortop Bras. 2018;26(4):248-251. doi: 10.1590/1413-785220182604191223.

10.

Unhealthy gut, unhealthy brain: The role of the intestinal microbiota in neurodegenerative diseases.

Spielman LJ, Gibson DL, Klegeris A.

Neurochem Int. 2018 Nov;120:149-163. doi: 10.1016/j.neuint.2018.08.005. Epub 2018 Aug 14. Review.

PMID:
30114473
11.

Probiotic supplementation and associated infant gut microbiome and health: a cautionary retrospective clinical comparison.

Quin C, Estaki M, Vollman DM, Barnett JA, Gill SK, Gibson DL.

Sci Rep. 2018 May 29;8(1):8283. doi: 10.1038/s41598-018-26423-3.

12.

Linking the Gut Microbial Ecosystem with the Environment: Does Gut Health Depend on Where We Live?

Tasnim N, Abulizi N, Pither J, Hart MM, Gibson DL.

Front Microbiol. 2017 Oct 6;8:1935. doi: 10.3389/fmicb.2017.01935. eCollection 2017.

13.

Bile Acid Administration Elicits an Intestinal Antimicrobial Program and Reduces the Bacterial Burden in Two Mouse Models of Enteric Infection.

Tremblay S, Romain G, Roux M, Chen XL, Brown K, Gibson DL, Ramanathan S, Menendez A.

Infect Immun. 2017 May 23;85(6). pii: e00942-16. doi: 10.1128/IAI.00942-16. Print 2017 Jun.

14.

Incretin hormones regulate microglia oxidative stress, survival and expression of trophic factors.

Spielman LJ, Gibson DL, Klegeris A.

Eur J Cell Biol. 2017 May;96(3):240-253. doi: 10.1016/j.ejcb.2017.03.004. Epub 2017 Mar 8.

PMID:
28336086
15.

Nonalcoholic Fatty Liver Disease, the Gut Microbiome, and Diet.

Mokhtari Z, Gibson DL, Hekmatdoost A.

Adv Nutr. 2017 Mar 15;8(2):240-252. doi: 10.3945/an.116.013151. Print 2017 Mar. Review.

16.

An Examination of Diet for the Maintenance of Remission in Inflammatory Bowel Disease.

Haskey N, Gibson DL.

Nutrients. 2017 Mar 10;9(3). pii: E259. doi: 10.3390/nu9030259. Review.

17.

The effects of voluntary wheel running on neuroinflammatory status: Role of monocyte chemoattractant protein-1.

Spielman LJ, Estaki M, Ghosh S, Gibson DL, Klegeris A.

Mol Cell Neurosci. 2017 Mar;79:93-102. doi: 10.1016/j.mcn.2016.12.009. Epub 2017 Jan 11.

PMID:
28088610
18.

Cardiorespiratory fitness as a predictor of intestinal microbial diversity and distinct metagenomic functions.

Estaki M, Pither J, Baumeister P, Little JP, Gill SK, Ghosh S, Ahmadi-Vand Z, Marsden KR, Gibson DL.

Microbiome. 2016 Aug 8;4(1):42. doi: 10.1186/s40168-016-0189-7.

19.

Dietary Lipid Type, Rather Than Total Number of Calories, Alters Outcomes of Enteric Infection in Mice.

DeCoffe D, Quin C, Gill SK, Tasnim N, Brown K, Godovannyi A, Dai C, Abulizi N, Chan YK, Ghosh S, Gibson DL.

J Infect Dis. 2016 Jun 1;213(11):1846-56. doi: 10.1093/infdis/jiw084. Epub 2016 Apr 10.

PMID:
27067195
20.

The goblet cell-derived mediator RELM-β drives spontaneous colitis in Muc2-deficient mice by promoting commensal microbial dysbiosis.

Morampudi V, Dalwadi U, Bhinder G, Sham HP, Gill SK, Chan J, Bergstrom KS, Huang T, Ma C, Jacobson K, Gibson DL, Vallance BA.

Mucosal Immunol. 2016 Sep;9(5):1218-33. doi: 10.1038/mi.2015.140. Epub 2016 Jan 27.

PMID:
26813339
21.

Prolonged antibiotic treatment induces a diabetogenic intestinal microbiome that accelerates diabetes in NOD mice.

Brown K, Godovannyi A, Ma C, Zhang Y, Ahmadi-Vand Z, Dai C, Gorzelak MA, Chan Y, Chan JM, Lochner A, Dutz JP, Vallance BA, Gibson DL.

ISME J. 2016 Feb;10(2):321-32. doi: 10.1038/ismej.2015.114. Epub 2015 Aug 14.

22.

Methods for Improving Human Gut Microbiome Data by Reducing Variability through Sample Processing and Storage of Stool.

Gorzelak MA, Gill SK, Tasnim N, Ahmadi-Vand Z, Jay M, Gibson DL.

PLoS One. 2015 Aug 7;10(8):e0134802. doi: 10.1371/journal.pone.0134802. eCollection 2015. Erratum in: PLoS One. 2015;10(9):e0139529.

23.

Maternal exposure to fish oil primes offspring to harbor intestinal pathobionts associated with altered immune cell balance.

Gibson DL, Gill SK, Brown K, Tasnim N, Ghosh S, Innis S, Jacobson K.

Gut Microbes. 2015;6(1):24-32. doi: 10.1080/19490976.2014.997610. Epub 2015 Jan 14.

24.

Interplay between intestinal alkaline phosphatase, diet, gut microbes and immunity.

Estaki M, DeCoffe D, Gibson DL.

World J Gastroenterol. 2014 Nov 14;20(42):15650-6. doi: 10.3748/wjg.v20.i42.15650. Review.

25.

Clinical consequences of diet-induced dysbiosis.

Chan YK, Estaki M, Gibson DL.

Ann Nutr Metab. 2013;63 Suppl 2:28-40. doi: 10.1159/000354902. Epub 2013 Nov 8. Review.

26.

SIGIRR, a negative regulator of TLR/IL-1R signalling promotes Microbiota dependent resistance to colonization by enteric bacterial pathogens.

Sham HP, Yu EY, Gulen MF, Bhinder G, Stahl M, Chan JM, Brewster L, Morampudi V, Gibson DL, Hughes MR, McNagny KM, Li X, Vallance BA.

PLoS Pathog. 2013;9(8):e1003539. doi: 10.1371/journal.ppat.1003539. Epub 2013 Aug 8.

27.

Short term exercise induces PGC-1α, ameliorates inflammation and increases mitochondrial membrane proteins but fails to increase respiratory enzymes in aging diabetic hearts.

Botta A, Laher I, Beam J, Decoffe D, Brown K, Halder S, Devlin A, Gibson DL, Ghosh S.

PLoS One. 2013 Aug 1;8(8):e70248. doi: 10.1371/journal.pone.0070248. Print 2013.

28.

Novel protective properties of auranofin: inhibition of human astrocyte cytotoxic secretions and direct neuroprotection.

Madeira JM, Renschler CJ, Mueller B, Hashioka S, Gibson DL, Klegeris A.

Life Sci. 2013 Jun 13;92(22):1072-80. doi: 10.1016/j.lfs.2013.04.005. Epub 2013 Apr 26.

PMID:
23624233
29.

Fish oil attenuates omega-6 polyunsaturated fatty acid-induced dysbiosis and infectious colitis but impairs LPS dephosphorylation activity causing sepsis.

Ghosh S, DeCoffe D, Brown K, Rajendiran E, Estaki M, Dai C, Yip A, Gibson DL.

PLoS One. 2013;8(2):e55468. doi: 10.1371/journal.pone.0055468. Epub 2013 Feb 6.

30.

Diets rich in n-6 PUFA induce intestinal microbial dysbiosis in aged mice.

Ghosh S, Molcan E, DeCoffe D, Dai C, Gibson DL.

Br J Nutr. 2013 Aug 28;110(3):515-23. doi: 10.1017/S0007114512005326. Epub 2013 Jan 8.

PMID:
23298440
31.

Diet-induced dysbiosis of the intestinal microbiota and the effects on immunity and disease.

Brown K, DeCoffe D, Molcan E, Gibson DL.

Nutrients. 2012 Aug;4(8):1095-119. Epub 2012 Aug 21. Erratum in: Nutrients. 2012 Oct;4(11)1552-3.

32.

The biological activity of auranofin: implications for novel treatment of diseases.

Madeira JM, Gibson DL, Kean WF, Klegeris A.

Inflammopharmacology. 2012 Dec;20(6):297-306. doi: 10.1007/s10787-012-0149-1. Epub 2012 Sep 11. Review.

PMID:
22965242
33.

Medicinal lavender modulates the enteric microbiota to protect against Citrobacter rodentium-induced colitis.

Baker J, Brown K, Rajendiran E, Yip A, DeCoffe D, Dai C, Molcan E, Chittick SA, Ghosh S, Mahmoud S, Gibson DL.

Am J Physiol Gastrointest Liver Physiol. 2012 Oct;303(7):G825-36. doi: 10.1152/ajpgi.00327.2011. Epub 2012 Jul 19.

34.

Colonic microbiota alters host susceptibility to infectious colitis by modulating inflammation, redox status, and ion transporter gene expression.

Ghosh S, Dai C, Brown K, Rajendiran E, Makarenko S, Baker J, Ma C, Halder S, Montero M, Ionescu VA, Klegeris A, Vallance BA, Gibson DL.

Am J Physiol Gastrointest Liver Physiol. 2011 Jul;301(1):G39-49. doi: 10.1152/ajpgi.00509.2010. Epub 2011 Mar 31.

35.

Interleukin-11 reduces TLR4-induced colitis in TLR2-deficient mice and restores intestinal STAT3 signaling.

Gibson DL, Montero M, Ropeleski MJ, Bergstrom KS, Ma C, Ghosh S, Merkens H, Huang J, Månsson LE, Sham HP, McNagny KM, Vallance BA.

Gastroenterology. 2010 Oct;139(4):1277-88. doi: 10.1053/j.gastro.2010.06.057. Epub 2010 Jun 25.

PMID:
20600022
36.

Muc2 protects against lethal infectious colitis by disassociating pathogenic and commensal bacteria from the colonic mucosa.

Bergstrom KS, Kissoon-Singh V, Gibson DL, Ma C, Montero M, Sham HP, Ryz N, Huang T, Velcich A, Finlay BB, Chadee K, Vallance BA.

PLoS Pathog. 2010 May 13;6(5):e1000902. doi: 10.1371/journal.ppat.1000902.

37.

Gut barrier disruption by an enteric bacterial pathogen accelerates insulitis in NOD mice.

Lee AS, Gibson DL, Zhang Y, Sham HP, Vallance BA, Dutz JP.

Diabetologia. 2010 Apr;53(4):741-8. doi: 10.1007/s00125-009-1626-y. Epub 2009 Dec 13.

PMID:
20012858
38.

Intestinal microbiota are transiently altered during Salmonella-induced gastroenteritis.

Gibson DL, Vallance BA.

Expert Rev Gastroenterol Hepatol. 2008 Aug;2(4):525-9. doi: 10.1586/17474124.2.4.525.

PMID:
19072400
39.

Identification of a bile-induced exopolysaccharide required for Salmonella biofilm formation on gallstone surfaces.

Crawford RW, Gibson DL, Kay WW, Gunn JS.

Infect Immun. 2008 Nov;76(11):5341-9. doi: 10.1128/IAI.00786-08. Epub 2008 Sep 15.

40.

A novel secretion pathway of Salmonella enterica acts as an antivirulence modulator during salmonellosis.

Gal-Mor O, Gibson DL, Baluta D, Vallance BA, Finlay BB.

PLoS Pathog. 2008 Apr 4;4(4):e1000036. doi: 10.1371/journal.ppat.1000036.

41.

Flagellin-dependent and -independent inflammatory responses following infection by enteropathogenic Escherichia coli and Citrobacter rodentium.

Khan MA, Bouzari S, Ma C, Rosenberger CM, Bergstrom KS, Gibson DL, Steiner TS, Vallance BA.

Infect Immun. 2008 Apr;76(4):1410-22. doi: 10.1128/IAI.01141-07. Epub 2008 Jan 28.

42.

Aggregation via the red, dry, and rough morphotype is not a virulence adaptation in Salmonella enterica serovar Typhimurium.

White AP, Gibson DL, Grassl GA, Kay WW, Finlay BB, Vallance BA, Surette MG.

Infect Immun. 2008 Mar;76(3):1048-58. doi: 10.1128/IAI.01383-07. Epub 2008 Jan 14.

43.

Modulation of intestinal goblet cell function during infection by an attaching and effacing bacterial pathogen.

Bergstrom KS, Guttman JA, Rumi M, Ma C, Bouzari S, Khan MA, Gibson DL, Vogl AW, Vallance BA.

Infect Immun. 2008 Feb;76(2):796-811. Epub 2007 Nov 5.

44.

MyD88 signalling plays a critical role in host defence by controlling pathogen burden and promoting epithelial cell homeostasis during Citrobacter rodentium-induced colitis.

Gibson DL, Ma C, Bergstrom KS, Huang JT, Man C, Vallance BA.

Cell Microbiol. 2008 Mar;10(3):618-31. Epub 2007 Nov 2.

PMID:
17979981
45.

Toll-like receptor 2 plays a critical role in maintaining mucosal integrity during Citrobacter rodentium-induced colitis.

Gibson DL, Ma C, Rosenberger CM, Bergstrom KS, Valdez Y, Huang JT, Khan MA, Vallance BA.

Cell Microbiol. 2008 Feb;10(2):388-403. Epub 2007 Oct 2.

PMID:
17910742
46.

The role of cellulose and O-antigen capsule in the colonization of plants by Salmonella enterica.

Barak JD, Jahn CE, Gibson DL, Charkowski AO.

Mol Plant Microbe Interact. 2007 Sep;20(9):1083-91.

47.

AgfC and AgfE facilitate extracellular thin aggregative fimbriae synthesis in Salmonella enteritidis.

Gibson DL, White AP, Rajotte CM, Kay WW.

Microbiology. 2007 Apr;153(Pt 4):1131-1140. doi: 10.1099/mic.0.2006/000935-0.

PMID:
17379722
48.

Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence.

Gibson DL, White AP, Snyder SD, Martin S, Heiss C, Azadi P, Surette M, Kay WW.

J Bacteriol. 2006 Nov;188(22):7722-30.

49.

Thin aggregative fimbriae and cellulose enhance long-term survival and persistence of Salmonella.

White AP, Gibson DL, Kim W, Kay WW, Surette MG.

J Bacteriol. 2006 May;188(9):3219-27.

50.

Extracellular polysaccharides associated with thin aggregative fimbriae of Salmonella enterica serovar enteritidis.

White AP, Gibson DL, Collinson SK, Banser PA, Kay WW.

J Bacteriol. 2003 Sep;185(18):5398-407.

Supplemental Content

Loading ...
Support Center