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Items: 1 to 50 of 320

1.

Incidence and characteristics of unintentional injuries among children in a resource limited setting in Kampala, Uganda.

Ssemugabo C, Mukama T, Halage AA, Paichadze N, Gibson DG, Kobusingye O.

Int J Inj Contr Saf Promot. 2018 May 30:1-9. doi: 10.1080/17457300.2018.1473445. [Epub ahead of print]

PMID:
29846121
2.

Cloning, Assembly, and Modification of the Primary Human Cytomegalovirus Isolate Toledo by Yeast-Based Transformation-Associated Recombination.

Vashee S, Stockwell TB, Alperovich N, Denisova EA, Gibson DG, Cady KC, Miller K, Kannan K, Malouli D, Crawford LB, Voorhies AA, Bruening E, Caposio P, Früh K.

mSphere. 2017 Oct 4;2(5). pii: e00331-17. doi: 10.1128/mSphereDirect.00331-17. eCollection 2017 Sep-Oct.

3.

Epiregulin and EGFR interactions are involved in pain processing.

Martin LJ, Smith SB, Khoutorsky A, Magnussen CA, Samoshkin A, Sorge RE, Cho C, Yosefpour N, Sivaselvachandran S, Tohyama S, Cole T, Khuong TM, Mir E, Gibson DG, Wieskopf JS, Sotocinal SG, Austin JS, Meloto CB, Gitt JH, Gkogkas C, Sonenberg N, Greenspan JD, Fillingim RB, Ohrbach R, Slade GD, Knott C, Dubner R, Nackley AG, Ribeiro-da-Silva A, Neely GG, Maixner W, Zaykin DV, Mogil JS, Diatchenko L.

J Clin Invest. 2017 Sep 1;127(9):3353-3366. doi: 10.1172/JCI87406. Epub 2017 Aug 7.

4.

Digital-to-biological converter for on-demand production of biologics.

Boles KS, Kannan K, Gill J, Felderman M, Gouvis H, Hubby B, Kamrud KI, Venter JC, Gibson DG.

Nat Biotechnol. 2017 Jul;35(7):672-675. doi: 10.1038/nbt.3859. Epub 2017 May 29.

PMID:
28553942
5.

Large-scale recoding of a bacterial genome by iterative recombineering of synthetic DNA.

Lau YH, Stirling F, Kuo J, Karrenbelt MAP, Chan YA, Riesselman A, Horton CA, Schäfer E, Lips D, Weinstock MT, Gibson DG, Way JC, Silver PA.

Nucleic Acids Res. 2017 Jun 20;45(11):6971-6980. doi: 10.1093/nar/gkx415.

6.

Evaluation of Mechanisms to Improve Performance of Mobile Phone Surveys in Low- and Middle-Income Countries: Research Protocol.

Gibson DG, Pariyo GW, Wosu AC, Greenleaf AR, Ali J, Ahmed S, Labrique AB, Islam K, Masanja H, Rutebemberwa E, Hyder AA.

JMIR Res Protoc. 2017 May 5;6(5):e81. doi: 10.2196/resprot.7534.

7.

Building the Evidence Base for Remote Data Collection in Low- and Middle-Income Countries: Comparing Reliability and Accuracy Across Survey Modalities.

Greenleaf AR, Gibson DG, Khattar C, Labrique AB, Pariyo GW.

J Med Internet Res. 2017 May 5;19(5):e140. doi: 10.2196/jmir.7331.

8.

Mobile Phone Surveys for Collecting Population-Level Estimates in Low- and Middle-Income Countries: A Literature Review.

Gibson DG, Pereira A, Farrenkopf BA, Labrique AB, Pariyo GW, Hyder AA.

J Med Internet Res. 2017 May 5;19(5):e139. doi: 10.2196/jmir.7428. Review.

9.

The Development of an Interactive Voice Response Survey for Noncommunicable Disease Risk Factor Estimation: Technical Assessment and Cognitive Testing.

Gibson DG, Farrenkopf BA, Pereira A, Labrique AB, Pariyo GW.

J Med Internet Res. 2017 May 5;19(5):e112. doi: 10.2196/jmir.7340.

10.

Ethics Considerations in Global Mobile Phone-Based Surveys of Noncommunicable Diseases: A Conceptual Exploration.

Ali J, Labrique AB, Gionfriddo K, Pariyo G, Gibson DG, Pratt B, Deutsch-Feldman M, Hyder AA.

J Med Internet Res. 2017 May 5;19(5):e110. doi: 10.2196/jmir.7326.

11.

Noncommunicable Disease Risk Factors and Mobile Phones: A Proposed Research Agenda.

Hyder AA, Wosu AC, Gibson DG, Labrique AB, Ali J, Pariyo GW.

J Med Internet Res. 2017 May 5;19(5):e133. doi: 10.2196/jmir.7246.

12.

Moving the Agenda on Noncommunicable Diseases: Policy Implications of Mobile Phone Surveys in Low and Middle-Income Countries.

Pariyo GW, Wosu AC, Gibson DG, Labrique AB, Ali J, Hyder AA.

J Med Internet Res. 2017 May 5;19(5):e115. doi: 10.2196/jmir.7302.

13.

Mobile phone-delivered reminders and incentives to improve childhood immunisation coverage and timeliness in Kenya (M-SIMU): a cluster randomised controlled trial.

Gibson DG, Ochieng B, Kagucia EW, Were J, Hayford K, Moulton LH, Levine OS, Odhiambo F, O'Brien KL, Feikin DR.

Lancet Glob Health. 2017 Apr;5(4):e428-e438. doi: 10.1016/S2214-109X(17)30072-4.

14.

Yeast genome, by design.

Kannan K, Gibson DG.

Science. 2017 Mar 10;355(6329):1024-1025. doi: 10.1126/science.aam9739. No abstract available.

PMID:
28280169
15.

Vibrio natriegens as a fast-growing host for molecular biology.

Weinstock MT, Hesek ED, Wilson CM, Gibson DG.

Nat Methods. 2016 Oct;13(10):849-51. doi: 10.1038/nmeth.3970. Epub 2016 Aug 29.

PMID:
27571549
16.

One step engineering of the small-subunit ribosomal RNA using CRISPR/Cas9.

Kannan K, Tsvetanova B, Chuang RY, Noskov VN, Assad-Garcia N, Ma L, Hutchison Iii CA, Smith HO, Glass JI, Merryman C, Venter JC, Gibson DG.

Sci Rep. 2016 Aug 4;6:30714. doi: 10.1038/srep30714.

17.

The Mobile Solutions for Immunization (M-SIMU) Trial: A Protocol for a Cluster Randomized Controlled Trial That Assesses the Impact of Mobile Phone Delivered Reminders and Travel Subsidies to Improve Childhood Immunization Coverage Rates and Timeliness in Western Kenya.

Gibson DG, Kagucia EW, Ochieng B, Hariharan N, Obor D, Moulton LH, Winch PJ, Levine OS, Odhiambo F, O'Brien KL, Feikin DR.

JMIR Res Protoc. 2016 May 17;5(2):e72. doi: 10.2196/resprot.5030.

18.

Design and synthesis of a minimal bacterial genome.

Hutchison CA 3rd, Chuang RY, Noskov VN, Assad-Garcia N, Deerinck TJ, Ellisman MH, Gill J, Kannan K, Karas BJ, Ma L, Pelletier JF, Qi ZQ, Richter RA, Strychalski EA, Sun L, Suzuki Y, Tsvetanova B, Wise KS, Smith HO, Glass JI, Merryman C, Gibson DG, Venter JC.

Science. 2016 Mar 25;351(6280):aad6253. doi: 10.1126/science.aad6253. Erratum in: ACS Chem Biol. 2016 May 20;11(5):1463.

PMID:
27013737
19.

Individual level determinants for not receiving immunization, receiving immunization with delay, and being severely underimmunized among rural western Kenyan children.

Gibson DG, Ochieng B, Kagucia EW, Obor D, Odhiambo F, O'Brien KL, Feikin DR.

Vaccine. 2015 Nov 27;33(48):6778-85. doi: 10.1016/j.vaccine.2015.10.021. Epub 2015 Oct 16.

PMID:
26482146
20.

Bacterial genome reduction using the progressive clustering of deletions via yeast sexual cycling.

Suzuki Y, Assad-Garcia N, Kostylev M, Noskov VN, Wise KS, Karas BJ, Stam J, Montague MG, Hanly TJ, Enriquez NJ, Ramon A, Goldgof GM, Richter RA, Vashee S, Chuang RY, Winzeler EA, Hutchison CA 3rd, Gibson DG, Smith HO, Glass JI, Venter JC.

Genome Res. 2015 Mar;25(3):435-44. doi: 10.1101/gr.182477.114. Epub 2015 Feb 5.

21.

Simultaneous non-contiguous deletions using large synthetic DNA and site-specific recombinases.

Krishnakumar R, Grose C, Haft DH, Zaveri J, Alperovich N, Gibson DG, Merryman C, Glass JI.

Nucleic Acids Res. 2014 Aug;42(14):e111. doi: 10.1093/nar/gku509. Epub 2014 Jun 9.

22.

Synthetic biology: Construction of a yeast chromosome.

Gibson DG, Venter JC.

Nature. 2014 May 8;509(7499):168-9. doi: 10.1038/509168a. No abstract available.

PMID:
24805340
23.

Programming biological operating systems: genome design, assembly and activation.

Gibson DG.

Nat Methods. 2014 May;11(5):521-6. doi: 10.1038/nmeth.2894.

PMID:
24781325
24.

Transferring whole genomes from bacteria to yeast spheroplasts using entire bacterial cells to reduce DNA shearing.

Karas BJ, Jablanovic J, Irvine E, Sun L, Ma L, Weyman PD, Gibson DG, Glass JI, Venter JC, Hutchison CA 3rd, Smith HO, Suzuki Y.

Nat Protoc. 2014 Apr;9(4):743-50. doi: 10.1038/nprot.2014.045. Epub 2014 Mar 6.

PMID:
24603933
25.

Rapidly produced SAM(®) vaccine against H7N9 influenza is immunogenic in mice.

Hekele A, Bertholet S, Archer J, Gibson DG, Palladino G, Brito LA, Otten GR, Brazzoli M, Buccato S, Bonci A, Casini D, Maione D, Qi ZQ, Gill JE, Caiazza NC, Urano J, Hubby B, Gao GF, Shu Y, De Gregorio E, Mandl CW, Mason PW, Settembre EC, Ulmer JB, Craig Venter J, Dormitzer PR, Rappuoli R, Geall AJ.

Emerg Microbes Infect. 2013 Aug;2(8):e52. doi: 10.1038/emi.2013.54. Epub 2013 Aug 14.

26.

Facial pain with localized and widespread manifestations: separate pathways of vulnerability.

Slade GD, Smith SB, Zaykin DV, Tchivileva IE, Gibson DG, Yuryev A, Mazo I, Bair E, Fillingim R, Ohrbach R, Greenspan J, Maixner W, Diatchenko L.

Pain. 2013 Nov;154(11):2335-43. doi: 10.1016/j.pain.2013.07.009. Epub 2013 Jul 16.

27.

Synthetic generation of influenza vaccine viruses for rapid response to pandemics.

Dormitzer PR, Suphaphiphat P, Gibson DG, Wentworth DE, Stockwell TB, Algire MA, Alperovich N, Barro M, Brown DM, Craig S, Dattilo BM, Denisova EA, De Souza I, Eickmann M, Dugan VG, Ferrari A, Gomila RC, Han L, Judge C, Mane S, Matrosovich M, Merryman C, Palladino G, Palmer GA, Spencer T, Strecker T, Trusheim H, Uhlendorff J, Wen Y, Yee AC, Zaveri J, Zhou B, Becker S, Donabedian A, Mason PW, Glass JI, Rappuoli R, Venter JC.

Sci Transl Med. 2013 May 15;5(185):185ra68. doi: 10.1126/scitranslmed.3006368.

28.

Assembly of large, high G+C bacterial DNA fragments in yeast.

Noskov VN, Karas BJ, Young L, Chuang RY, Gibson DG, Lin YC, Stam J, Yonemoto IT, Suzuki Y, Andrews-Pfannkoch C, Glass JI, Smith HO, Hutchison CA 3rd, Venter JC, Weyman PD.

ACS Synth Biol. 2012 Jul 20;1(7):267-73. doi: 10.1021/sb3000194. Epub 2012 May 21.

PMID:
23651249
29.

Direct transfer of whole genomes from bacteria to yeast.

Karas BJ, Jablanovic J, Sun L, Ma L, Goldgof GM, Stam J, Ramon A, Manary MJ, Winzeler EA, Venter JC, Weyman PD, Gibson DG, Glass JI, Hutchison CA 3rd, Smith HO, Suzuki Y.

Nat Methods. 2013 May;10(5):410-2. doi: 10.1038/nmeth.2433. Epub 2013 Mar 31.

30.

The feasibility of using mobile-phone based SMS reminders and conditional cash transfers to improve timely immunization in rural Kenya.

Wakadha H, Chandir S, Were EV, Rubin A, Obor D, Levine OS, Gibson DG, Odhiambo F, Laserson KF, Feikin DR.

Vaccine. 2013 Jan 30;31(6):987-93. doi: 10.1016/j.vaccine.2012.11.093. Epub 2012 Dec 13.

31.

Sequence analysis of a complete 1.66 Mb Prochlorococcus marinus MED4 genome cloned in yeast.

Tagwerker C, Dupont CL, Karas BJ, Ma L, Chuang RY, Benders GA, Ramon A, Novotny M, Montague MG, Venepally P, Brami D, Schwartz A, Andrews-Pfannkoch C, Gibson DG, Glass JI, Smith HO, Venter JC, Hutchison CA 3rd.

Nucleic Acids Res. 2012 Nov 1;40(20):10375-83. doi: 10.1093/nar/gks823. Epub 2012 Aug 31.

32.

The great "infiltrator": an uncommon cause of hepatitis.

Gibson DG, Oller KL, Lezama J.

Am J Med. 2012 Nov;125(11):1068-70. doi: 10.1016/j.amjmed.2012.06.007. Epub 2012 Aug 28. No abstract available.

PMID:
22935560
33.

Methods and applications for assembling large DNA constructs.

Merryman C, Gibson DG.

Metab Eng. 2012 May;14(3):196-204. Review.

PMID:
22629570
34.

A preliminary study of pneumonia etiology among hospitalized children in Kenya.

Hammitt LL, Kazungu S, Morpeth SC, Gibson DG, Mvera B, Brent AJ, Mwarumba S, Onyango CO, Bett A, Akech DO, Murdoch DR, Nokes DJ, Scott JA.

Clin Infect Dis. 2012 Apr;54 Suppl 2:S190-9. doi: 10.1093/cid/cir1071. Erratum in: Clin Infect Dis. 2013 May;56(10):1518.

35.

Oligonucleotide assembly in yeast to produce synthetic DNA fragments.

Gibson DG.

Methods Mol Biol. 2012;852:11-21. doi: 10.1007/978-1-61779-564-0_2.

PMID:
22328422
36.

Potential genetic risk factors for chronic TMD: genetic associations from the OPPERA case control study.

Smith SB, Maixner DW, Greenspan JD, Dubner R, Fillingim RB, Ohrbach R, Knott C, Slade GD, Bair E, Gibson DG, Zaykin DV, Weir BS, Maixner W, Diatchenko L.

J Pain. 2011 Nov;12(11 Suppl):T92-101. doi: 10.1016/j.jpain.2011.08.005.

37.

Structural basis for μ-opioid receptor binding and activation.

Serohijos AW, Yin S, Ding F, Gauthier J, Gibson DG, Maixner W, Dokholyan NV, Diatchenko L.

Structure. 2011 Nov 9;19(11):1683-90. doi: 10.1016/j.str.2011.08.003.

38.

A new diastolic heart sound secondary to free pulmonary regurgitation.

Shah BN, Li W, Gibson DG.

Int J Cardiol. 2012 Jan 12;154(1):82-3. doi: 10.1016/j.ijcard.2011.10.095. Epub 2011 Nov 4. No abstract available.

PMID:
22056044
39.

Enzymatic assembly of overlapping DNA fragments.

Gibson DG.

Methods Enzymol. 2011;498:349-61. doi: 10.1016/B978-0-12-385120-8.00015-2.

PMID:
21601685
40.

Gene and genome construction in yeast.

Gibson DG.

Curr Protoc Mol Biol. 2011 Apr;Chapter 3:Unit3.22. doi: 10.1002/0471142727.mb0322s94.

PMID:
21472698
41.

Isolation of circular yeast artificial chromosomes for synthetic biology and functional genomics studies.

Noskov VN, Chuang RY, Gibson DG, Leem SH, Larionov V, Kouprina N.

Nat Protoc. 2011 Jan;6(1):89-96. doi: 10.1038/nprot.2010.174. Epub 2010 Dec 23.

PMID:
21212778
42.

Immobilization of acetylcholinesterase in lipid membranes deposited on self-assembled monolayers.

Milkani E, Khaing AM, Huang F, Gibson DG, Gridley S, Garceau N, Lambert CR, McGimpsey WG.

Langmuir. 2010 Dec 21;26(24):18884-92. doi: 10.1021/la103333c. Epub 2010 Nov 18.

PMID:
21087026
43.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene.

Neely GG, Hess A, Costigan M, Keene AC, Goulas S, Langeslag M, Griffin RS, Belfer I, Dai F, Smith SB, Diatchenko L, Gupta V, Xia CP, Amann S, Kreitz S, Heindl-Erdmann C, Wolz S, Ly CV, Arora S, Sarangi R, Dan D, Novatchkova M, Rosenzweig M, Gibson DG, Truong D, Schramek D, Zoranovic T, Cronin SJ, Angjeli B, Brune K, Dietzl G, Maixner W, Meixner A, Thomas W, Pospisilik JA, Alenius M, Kress M, Subramaniam S, Garrity PA, Bellen HJ, Woolf CJ, Penninger JM.

Cell. 2010 Nov 12;143(4):628-38. doi: 10.1016/j.cell.2010.09.047.

44.

Randomised trial of ramipril in repaired tetralogy of Fallot and pulmonary regurgitation: the APPROPRIATE study (Ace inhibitors for Potential PRevention Of the deleterious effects of Pulmonary Regurgitation In Adults with repaired TEtralogy of Fallot).

Babu-Narayan SV, Uebing A, Davlouros PA, Kemp M, Davidson S, Dimopoulos K, Bayne S, Pennell DJ, Gibson DG, Flather M, Kilner PJ, Li W, Gatzoulis MA.

Int J Cardiol. 2012 Feb 9;154(3):299-305. doi: 10.1016/j.ijcard.2010.09.057. Epub 2010 Oct 22.

PMID:
20970202
45.

Chemical synthesis of the mouse mitochondrial genome.

Gibson DG, Smith HO, Hutchison CA 3rd, Venter JC, Merryman C.

Nat Methods. 2010 Nov;7(11):901-3. doi: 10.1038/nmeth.1515. Epub 2010 Oct 10.

PMID:
20935651
46.

Underestimation of duration of ventricular activation by 12-lead ECG compared with direct measurement of activation duration derived from implanted pacemaker leads.

Duncan AM, Lim E, Mebrate Y, Wong T, Gibson DG.

Int J Cardiol. 2011 Oct 6;152(1):35-42. doi: 10.1016/j.ijcard.2010.07.001. Epub 2010 Aug 3.

PMID:
20678820
47.

A novel alternatively spliced isoform of the mu-opioid receptor: functional antagonism.

Gris P, Gauthier J, Cheng P, Gibson DG, Gris D, Laur O, Pierson J, Wentworth S, Nackley AG, Maixner W, Diatchenko L.

Mol Pain. 2010 Jun 2;6:33. doi: 10.1186/1744-8069-6-33.

48.

Creation of a bacterial cell controlled by a chemically synthesized genome.

Gibson DG, Glass JI, Lartigue C, Noskov VN, Chuang RY, Algire MA, Benders GA, Montague MG, Ma L, Moodie MM, Merryman C, Vashee S, Krishnakumar R, Assad-Garcia N, Andrews-Pfannkoch C, Denisova EA, Young L, Qi ZQ, Segall-Shapiro TH, Calvey CH, Parmar PP, Hutchison CA 3rd, Smith HO, Venter JC.

Science. 2010 Jul 2;329(5987):52-6. doi: 10.1126/science.1190719. Epub 2010 May 20.

49.

Cloning whole bacterial genomes in yeast.

Benders GA, Noskov VN, Denisova EA, Lartigue C, Gibson DG, Assad-Garcia N, Chuang RY, Carrera W, Moodie M, Algire MA, Phan Q, Alperovich N, Vashee S, Merryman C, Venter JC, Smith HO, Glass JI, Hutchison CA 3rd.

Nucleic Acids Res. 2010 May;38(8):2558-69. doi: 10.1093/nar/gkq119. Epub 2010 Mar 7.

50.

Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides.

Gibson DG.

Nucleic Acids Res. 2009 Nov;37(20):6984-90. doi: 10.1093/nar/gkp687. Epub 2009 Sep 10.

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