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Items: 21


Corrigendum to "Hodgkin Lymphoma Cell Lines Are Characterized by a Specific miRNA Expression Profile." Neoplasia 2009, Feb;11(2):167-176.

Gibcus JH, Tan LP, Harms G, Schakel RN, de Jong D, Blokzijl T, Möller P, Poppema S, Kroesen BJ, van den Berg A.

Neoplasia. 2018 Jan 28;20(2):226. doi: 10.1016/j.neo.2017.11.008. eCollection 2018 Feb.


A pathway for mitotic chromosome formation.

Gibcus JH, Samejima K, Goloborodko A, Samejima I, Naumova N, Nuebler J, Kanemaki MT, Xie L, Paulson JR, Earnshaw WC, Mirny LA, Dekker J.

Science. 2018 Feb 9;359(6376). pii: eaao6135. doi: 10.1126/science.aao6135. Epub 2018 Jan 18.


Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.

Nora EP, Goloborodko A, Valton AL, Gibcus JH, Uebersohn A, Abdennur N, Dekker J, Mirny LA, Bruneau BG.

Cell. 2017 May 18;169(5):930-944.e22. doi: 10.1016/j.cell.2017.05.004.


Hi-C 2.0: An optimized Hi-C procedure for high-resolution genome-wide mapping of chromosome conformation.

Belaghzal H, Dekker J, Gibcus JH.

Methods. 2017 Jul 1;123:56-65. doi: 10.1016/j.ymeth.2017.04.004. Epub 2017 Apr 18.


A nurse-led up-titration clinic improves chronic heart failure optimization of beta-adrenergic receptor blocking therapy--a randomized controlled trial.

Driscoll A, Srivastava P, Toia D, Gibcus J, Hare DL.

BMC Res Notes. 2014 Sep 23;7:668. doi: 10.1186/1756-0500-7-668.


FADD expression is associated with regional and distant metastasis in squamous cell carcinoma of the head and neck.

Pattje WJ, Melchers LJ, Slagter-Menkema L, Mastik MF, Schrijvers ML, Gibcus JH, Kluin PM, Hoegen-Chouvalova O, van der Laan BF, Roodenburg JL, van der Wal JE, Schuuring E, Langendijk JA.

Histopathology. 2013 Aug;63(2):263-70. doi: 10.1111/his.12174. Epub 2013 Jun 13.


The hierarchy of the 3D genome.

Gibcus JH, Dekker J.

Mol Cell. 2013 Mar 7;49(5):773-82. doi: 10.1016/j.molcel.2013.02.011. Review.


Hi-C: a comprehensive technique to capture the conformation of genomes.

Belton JM, McCord RP, Gibcus JH, Naumova N, Zhan Y, Dekker J.

Methods. 2012 Nov;58(3):268-76. doi: 10.1016/j.ymeth.2012.05.001. Epub 2012 May 29.


The context of gene expression regulation.

Gibcus JH, Dekker J.

F1000 Biol Rep. 2012;4:8. doi: 10.3410/B4-8. Epub 2012 Apr 2.


Rapid generation of microRNA sponges for microRNA inhibition.

Kluiver J, Gibcus JH, Hettinga C, Adema A, Richter MK, Halsema N, Slezak-Prochazka I, Ding Y, Kroesen BJ, van den Berg A.

PLoS One. 2012;7(1):e29275. doi: 10.1371/journal.pone.0029275. Epub 2012 Jan 6.


FADD expression as a prognosticator in early-stage glottic squamous cell carcinoma of the larynx treated primarily with radiotherapy.

Schrijvers ML, Pattje WJ, Slagter-Menkema L, Mastik MF, Gibcus JH, Langendijk JA, van der Wal JE, van der Laan BF, Schuuring E.

Int J Radiat Oncol Biol Phys. 2012 Jul 15;83(4):1220-6. doi: 10.1016/j.ijrobp.2011.09.060. Epub 2011 Dec 28.


MiR-17/106b seed family regulates p21 in Hodgkin's lymphoma.

Gibcus JH, Kroesen BJ, Koster R, Halsema N, de Jong D, de Jong S, Poppema S, Kluiver J, Diepstra A, van den Berg A.

J Pathol. 2011 Dec;225(4):609-17. doi: 10.1002/path.2958. Epub 2011 Sep 26.


Cytoplasmic p21 expression levels determine cisplatin resistance in human testicular cancer.

Koster R, di Pietro A, Timmer-Bosscha H, Gibcus JH, van den Berg A, Suurmeijer AJ, Bischoff R, Gietema JA, de Jong S.

J Clin Invest. 2010 Oct;120(10):3594-605. doi: 10.1172/JCI41939. Epub 2010 Sep 1.


miRNA profiling of B-cell subsets: specific miRNA profile for germinal center B cells with variation between centroblasts and centrocytes.

Tan LP, Wang M, Robertus JL, Schakel RN, Gibcus JH, Diepstra A, Harms G, Peh SC, Reijmers RM, Pals ST, Kroesen BJ, Kluin PM, Poppema S, van den Berg A.

Lab Invest. 2009 Jun;89(6):708-16. doi: 10.1038/labinvest.2009.26. Epub 2009 Apr 6.


Hodgkin lymphoma cell lines are characterized by a specific miRNA expression profile.

Gibcus JH, Tan LP, Harms G, Schakel RN, de Jong D, Blokzijl T, Möller P, Poppema S, Kroesen BJ, van den Berg A.

Neoplasia. 2009 Feb;11(2):167-76. Erratum in: Neoplasia. 2018 Jan 28;20(2):226.


Radiotherapy in laryngeal carcinoma: can a panel of 13 markers predict response?

Wildeman MA, Gibcus JH, Hauptmann M, Begg AC, van Velthuysen ML, Hoebers FJ, Mastik MF, Schuuring E, van der Wal JE, van den Brekel MW.

Laryngoscope. 2009 Feb;119(2):316-22. doi: 10.1002/lary.20069.


Cortactin expression predicts poor survival in laryngeal carcinoma.

Gibcus JH, Mastik MF, Menkema L, de Bock GH, Kluin PM, Schuuring E, van der Wal JE.

Br J Cancer. 2008 Mar 11;98(5):950-5. doi: 10.1038/sj.bjc.6604246. Epub 2008 Feb 12.


Amplicon mapping and expression profiling identify the Fas-associated death domain gene as a new driver in the 11q13.3 amplicon in laryngeal/pharyngeal cancer.

Gibcus JH, Menkema L, Mastik MF, Hermsen MA, de Bock GH, van Velthuysen ML, Takes RP, Kok K, Alvarez Marcos CA, van der Laan BF, van den Brekel MW, Langendijk JA, Kluin PM, van der Wal JE, Schuuring E.

Clin Cancer Res. 2007 Nov 1;13(21):6257-66.


Microarray amplification bias: loss of 30% differentially expressed genes due to long probe - poly(A)-tail distances.

Boelens MC, te Meerman GJ, Gibcus JH, Blokzijl T, Boezen HM, Timens W, Postma DS, Groen HJ, van den Berg A.

BMC Genomics. 2007 Aug 15;8:277.


High-resolution mapping identifies a commonly amplified 11q13.3 region containing multiple genes flanked by segmental duplications.

Gibcus JH, Kok K, Menkema L, Hermsen MA, Mastik M, Kluin PM, van der Wal JE, Schuuring E.

Hum Genet. 2007 Apr;121(2):187-201. Epub 2006 Dec 15.


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