Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 501

1.

Every Breath You Take: New Insights into Plant and Animal Oxygen Sensing.

Gibbs DJ, Holdsworth MJ.

Cell. 2019 Nov 22. pii: S0092-8674(19)31220-6. doi: 10.1016/j.cell.2019.10.043. [Epub ahead of print]

PMID:
31785834
2.

ADAPTS: Automated deconvolution augmentation of profiles for tissue specific cells.

Danziger SA, Gibbs DL, Shmulevich I, McConnell M, Trotter MWB, Schmitz F, Reiss DJ, Ratushny AV.

PLoS One. 2019 Nov 19;14(11):e0224693. doi: 10.1371/journal.pone.0224693. eCollection 2019.

3.

Resilience assessment of Puerto Rico's coral reefs to inform reef management.

Gibbs DA, West JM.

PLoS One. 2019 Nov 5;14(11):e0224360. doi: 10.1371/journal.pone.0224360. eCollection 2019.

4.

The SINE Compound KPT-350 Blocks Dystrophic Pathologies in DMD Zebrafish and Mice.

Hightower RM, Reid AL, Gibbs DE, Wang Y, Widrick JJ, Kunkel LM, Kastenschmidt JM, Villalta SA, van Groen T, Chang H, Gornisiewicz S, Landesman Y, Tamir S, Alexander MS.

Mol Ther. 2019 Sep 3. pii: S1525-0016(19)30399-5. doi: 10.1016/j.ymthe.2019.08.016. [Epub ahead of print]

5.

A Pan-Cancer Approach to Predict Responsiveness to Immune Checkpoint Inhibitors by Machine Learning.

Polano M, Chierici M, Dal Bo M, Gentilini D, Di Cintio F, Baboci L, Gibbs DL, Furlanello C, Toffoli G.

Cancers (Basel). 2019 Oct 15;11(10). pii: E1562. doi: 10.3390/cancers11101562.

6.

Orofacial Movements Involve Parallel Corticobulbar Projections from Motor Cortex to Trigeminal Premotor Nuclei.

Mercer Lindsay N, Knutsen PM, Lozada AF, Gibbs D, Karten HJ, Kleinfeld D.

Neuron. 2019 Nov 20;104(4):765-780.e3. doi: 10.1016/j.neuron.2019.08.032. Epub 2019 Oct 3.

PMID:
31587918
7.

Zebrafish embryo as a replacement model for initial biocompatibility studies of biomaterials and drug delivery systems.

Rothenbücher TSP, Ledin J, Gibbs D, Engqvist H, Persson C, Hulsart-Billström G.

Acta Biomater. 2019 Dec;100:235-243. doi: 10.1016/j.actbio.2019.09.038. Epub 2019 Oct 1.

PMID:
31585201
8.

Inherited Melanoma Risk Variants Associated with Histopathologically Amelanotic Melanoma.

Gibbs DC, Orlow I, Vernali S, Powell HB, Kanetsky PA, Luo L, Busam KJ, Sharma A, Kricker A, Armstrong BK, Cust AE, Anton-Culver H, Gruber SB, Gallagher RP, Zanetti R, Rosso S, Sacchetto L, Dwyer T, Ollila DW, Begg CB, Berwick M, Thomas NE; GEM Study Group.

J Invest Dermatol. 2019 Sep 27. pii: S0022-202X(19)33239-7. doi: 10.1016/j.jid.2019.09.006. [Epub ahead of print] No abstract available.

PMID:
31568773
9.

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress.

Hartman S, Liu Z, van Veen H, Vicente J, Reinen E, Martopawiro S, Zhang H, van Dongen N, Bosman F, Bassel GW, Visser EJW, Bailey-Serres J, Theodoulou FL, Hebelstrup KH, Gibbs DJ, Holdsworth MJ, Sasidharan R, Voesenek LACJ.

Nat Commun. 2019 Sep 5;10(1):4020. doi: 10.1038/s41467-019-12045-4.

10.

The Immune Landscape of Cancer.

Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, Malhotra R, Farshidfar F, Colaprico A, Parker JS, Mose LE, Vo NS, Liu J, Liu Y, Rader J, Dhankani V, Reynolds SM, Bowlby R, Califano A, Cherniack AD, Anastassiou D, Bedognetti D, Mokrab Y, Newman AM, Rao A, Chen K, Krasnitz A, Hu H, Malta TM, Noushmehr H, Pedamallu CS, Bullman S, Ojesina AI, Lamb A, Zhou W, Shen H, Choueiri TK, Weinstein JN, Guinney J, Saltz J, Holt RA, Rabkin CS; Cancer Genome Atlas Research Network, Lazar AJ, Serody JS, Demicco EG, Disis ML, Vincent BG, Shmulevich I.

Immunity. 2019 Aug 20;51(2):411-412. doi: 10.1016/j.immuni.2019.08.004. No abstract available.

11.

Skin cancer surveillance practices and attitudes among hairdressers: a cross-sectional study in Atlanta, Georgia.

Gibbs DC, Ng S, Baranowski MLH, Reddy S, Annelise Bederman, Bean MB, Eisenstadt R, Chen SC.

J Am Acad Dermatol. 2019 Jul 17. pii: S0190-9622(19)32394-1. doi: 10.1016/j.jaad.2019.07.034. [Epub ahead of print] No abstract available.

PMID:
31325550
12.

Build Your Own Microscope: Step-By-Step Guide for Building a Prism-Based TIRF Microscope.

Gibbs DR, Kaur A, Megalathan A, Sapkota K, Dhakal S.

Methods Protoc. 2018 Nov 3;1(4). pii: E40. doi: 10.3390/mps1040040.

13.

Genomic and molecular characterization of preterm birth.

Knijnenburg TA, Vockley JG, Chambwe N, Gibbs DL, Humphries C, Huddleston KC, Klein E, Kothiyal P, Tasseff R, Dhankani V, Bodian DL, Wong WSW, Glusman G, Mauldin DE, Miller M, Slagel J, Elasady S, Roach JC, Kramer R, Leinonen K, Linthorst J, Baveja R, Baker R, Solomon BD, Eley G, Iyer RK, Maxwell GL, Bernard B, Shmulevich I, Hood L, Niederhuber JE.

Proc Natl Acad Sci U S A. 2019 Mar 19;116(12):5819-5827. doi: 10.1073/pnas.1716314116. Epub 2019 Mar 4.

14.

Early intervention programmes for infants at high risk of atypical neurodevelopmental outcome.

Hutchon B, Gibbs D, Harniess P, Jary S, Crossley SL, Moffat JV, Basu N, Basu AP.

Dev Med Child Neurol. 2019 Dec;61(12):1362-1367. doi: 10.1111/dmcn.14187. Epub 2019 Mar 4. Review.

PMID:
30828797
15.

Early Awareness of Alzheimer Disease: A Neurologist's Personal Perspective.

Gibbs DM.

JAMA Neurol. 2019 Mar 1;76(3):249. doi: 10.1001/jamaneurol.2018.4910. No abstract available.

PMID:
30776065
16.

Regulatory cascade involving transcriptional and N-end rule pathways in rice under submergence.

Lin CC, Chao YT, Chen WC, Ho HY, Chou MY, Li YR, Wu YL, Yang HA, Hsieh H, Lin CS, Wu FH, Chou SJ, Jen HC, Huang YH, Irene D, Wu WJ, Wu JL, Gibbs DJ, Ho MC, Shih MC.

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3300-3309. doi: 10.1073/pnas.1818507116. Epub 2019 Feb 5.

17.

Oxygen-dependent proteolysis regulates the stability of angiosperm polycomb repressive complex 2 subunit VERNALIZATION 2.

Gibbs DJ, Tedds HM, Labandera AM, Bailey M, White MD, Hartman S, Sprigg C, Mogg SL, Osborne R, Dambire C, Boeckx T, Paling Z, Voesenek LACJ, Flashman E, Holdsworth MJ.

Nat Commun. 2018 Dec 21;9(1):5438. doi: 10.1038/s41467-018-07875-7.

18.

Relationship of Chromosome Arm 10q Variants to Occurrence of Multiple Primary Melanoma in the Population-Based Genes, Environment, and Melanoma (GEM) Study.

Miles JA, Orlow I, Kanetsky PA, Luo L, Cust AE, Armstrong BK, Kricker A, Anton-Culver H, Gruber SB, Gallagher RP, Zanetti R, Rosso S, Sacchetto L, Dwyer T, Gibbs DC, Busam KJ, Mavinkurve V, Ollila DW, Begg CB, Berwick M, Thomas NE; GEM Study Group.

J Invest Dermatol. 2019 Jun;139(6):1410-1412. doi: 10.1016/j.jid.2018.11.030. Epub 2018 Dec 17. No abstract available.

PMID:
30571972
19.

Risk factors for admission after shoulder arthroscopy.

Christian RA, Gibbs DB, Nicolay RW, Selley RS, Saltzman MD.

J Shoulder Elbow Surg. 2019 May;28(5):882-887. doi: 10.1016/j.jse.2018.09.031. Epub 2018 Dec 13.

PMID:
30553800
20.

A meta-synthesis of how parents of children with autism describe their experience of advocating for their children during the process of diagnosis.

Boshoff K, Gibbs D, Phillips RL, Wiles L, Porter L.

Health Soc Care Community. 2019 Jul;27(4):e143-e157. doi: 10.1111/hsc.12691. Epub 2018 Dec 12. Review.

PMID:
30548710
21.

The Cancer Prevention Project of Philadelphia: preliminary findings examining diversity among the African diaspora.

Blackman E, Ashing K, Gibbs D, Kuo YM, Andrews A, Ramakodi M, Devarajan K, Bucci J, Jean-Louis G, Richards-Waritay O, Wilson B, Bowen C, Edi E, Tolbert V, Noumbissi R, Cabral DN, Oliver J, Roberts R, Tulloch-Reid M, Ragin C.

Ethn Health. 2018 Nov 19:1-17. doi: 10.1080/13557858.2018.1548695. [Epub ahead of print]

PMID:
30453751
22.

Integrative Molecular Characterization of Malignant Pleural Mesothelioma.

Hmeljak J, Sanchez-Vega F, Hoadley KA, Shih J, Stewart C, Heiman D, Tarpey P, Danilova L, Drill E, Gibb EA, Bowlby R, Kanchi R, Osmanbeyoglu HU, Sekido Y, Takeshita J, Newton Y, Graim K, Gupta M, Gay CM, Diao L, Gibbs DL, Thorsson V, Iype L, Kantheti H, Severson DT, Ravegnini G, Desmeules P, Jungbluth AA, Travis WD, Dacic S, Chirieac LR, Galateau-Sallé F, Fujimoto J, Husain AN, Silveira HC, Rusch VW, Rintoul RC, Pass H, Kindler H, Zauderer MG, Kwiatkowski DJ, Bueno R, Tsao AS, Creaney J, Lichtenberg T, Leraas K, Bowen J; TCGA Research Network, Felau I, Zenklusen JC, Akbani R, Cherniack AD, Byers LA, Noble MS, Fletcher JA, Robertson AG, Shen R, Aburatani H, Robinson BW, Campbell P, Ladanyi M.

Cancer Discov. 2018 Dec;8(12):1548-1565. doi: 10.1158/2159-8290.CD-18-0804. Epub 2018 Oct 15.

23.

Genetic interactions between ABA signalling and the Arg/N-end rule pathway during Arabidopsis seedling establishment.

Zhang H, Gannon L, Jones PD, Rundle CA, Hassall KL, Gibbs DJ, Holdsworth MJ, Theodoulou FL.

Sci Rep. 2018 Oct 12;8(1):15192. doi: 10.1038/s41598-018-33630-5.

24.

Transgenic zebrafish model of DUX4 misexpression reveals a developmental role in FSHD pathogenesis.

Pakula A, Lek A, Widrick J, Mitsuhashi H, Bugda Gwilt KM, Gupta VA, Rahimov F, Criscione J, Zhang Y, Gibbs D, Murphy Q, Manglik A, Mead L, Kunkel L.

Hum Mol Genet. 2019 Jan 15;28(2):320-331. doi: 10.1093/hmg/ddy348.

PMID:
30307508
25.

A limb-girdle muscular dystrophy 2I model of muscular dystrophy identifies corrective drug compounds for dystroglycanopathies.

Serafini PR, Feyder MJ, Hightower RM, Garcia-Perez D, Vieira NM, Lek A, Gibbs DE, Moukha-Chafiq O, Augelli-Szafran CE, Kawahara G, Widrick JJ, Kunkel LM, Alexander MS.

JCI Insight. 2018 Sep 20;3(18). pii: 120493. doi: 10.1172/jci.insight.120493. eCollection 2018 Sep 20.

26.

Distinct branches of the N-end rule pathway modulate the plant immune response.

Vicente J, Mendiondo GM, Pauwels J, Pastor V, Izquierdo Y, Naumann C, Movahedi M, Rooney D, Gibbs DJ, Smart K, Bachmair A, Gray JE, Dissmeyer N, Castresana C, Ray RV, Gevaert K, Holdsworth MJ.

New Phytol. 2019 Jan;221(2):988-1000. doi: 10.1111/nph.15387. Epub 2018 Aug 17.

27.

An open source microcontroller based flume for evaluating swimming performance of larval, juvenile, and adult zebrafish.

Widrick JJ, Gibbs DE, Sanchez B, Gupta VA, Pakula A, Lawrence C, Beggs AH, Kunkel LM.

PLoS One. 2018 Jun 26;13(6):e0199712. doi: 10.1371/journal.pone.0199712. eCollection 2018.

28.

Adaptation Design Tool for Climate-Smart Management of Coral Reefs and Other Natural Resources.

West JM, Courtney CA, Hamilton AT, Parker BA, Gibbs DA, Bradley P, Julius SH.

Environ Manage. 2018 Oct;62(4):644-664. doi: 10.1007/s00267-018-1065-y. Epub 2018 Jun 22.

29.

Associations of Circulating 25-Hydroxyvitamin D3 Concentrations With Incident, Sporadic Colorectal Adenoma Risk According to Common Vitamin D-Binding Protein Isoforms.

Gibbs DC, Fedirko V, Um C, Gross MD, Thyagarajan B, Bostick RM.

Am J Epidemiol. 2018 Sep 1;187(9):1923-1930. doi: 10.1093/aje/kwy102.

30.

Single-Molecule Imaging Reveals Conformational Manipulation of Holliday Junction DNA by the Junction Processing Protein RuvA.

Gibbs DR, Dhakal S.

Biochemistry. 2018 Jul 3;57(26):3616-3624. doi: 10.1021/acs.biochem.8b00404. Epub 2018 May 24.

PMID:
29767969
31.

Inherited Genetic Variants Associated with Melanoma BRAF/NRAS Subtypes.

Thomas NE, Edmiston SN, Orlow I, Kanetsky PA, Luo L, Gibbs DC, Parrish EA, Hao H, Busam KJ, Armstrong BK, Kricker A, Cust AE, Anton-Culver H, Gruber SB, Gallagher RP, Zanetti R, Rosso S, Sacchetto L, Dwyer T, Ollila DW, Begg CB, Berwick M, Conway K; GEM Study Group.

J Invest Dermatol. 2018 Nov;138(11):2398-2404. doi: 10.1016/j.jid.2018.04.025. Epub 2018 May 9.

32.

The Immune Landscape of Cancer.

Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, Malhotra R, Farshidfar F, Colaprico A, Parker JS, Mose LE, Vo NS, Liu J, Liu Y, Rader J, Dhankani V, Reynolds SM, Bowlby R, Califano A, Cherniack AD, Anastassiou D, Bedognetti D, Mokrab Y, Newman AM, Rao A, Chen K, Krasnitz A, Hu H, Malta TM, Noushmehr H, Pedamallu CS, Bullman S, Ojesina AI, Lamb A, Zhou W, Shen H, Choueiri TK, Weinstein JN, Guinney J, Saltz J, Holt RA, Rabkin CS; Cancer Genome Atlas Research Network, Lazar AJ, Serody JS, Demicco EG, Disis ML, Vincent BG, Shmulevich I.

Immunity. 2018 Apr 17;48(4):812-830.e14. doi: 10.1016/j.immuni.2018.03.023. Epub 2018 Apr 5. Erratum in: Immunity. 2019 Aug 20;51(2):411-412.

33.

Maternal mental health during the neonatal period: Relationships to the occupation of parenting.

Harris R, Gibbs D, Mangin-Heimos K, Pineda R.

Early Hum Dev. 2018 May;120:31-39. doi: 10.1016/j.earlhumdev.2018.03.009. Epub 2018 Apr 4.

34.

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics.

Ding L, Bailey MH, Porta-Pardo E, Thorsson V, Colaprico A, Bertrand D, Gibbs DL, Weerasinghe A, Huang KL, Tokheim C, Cortés-Ciriano I, Jayasinghe R, Chen F, Yu L, Sun S, Olsen C, Kim J, Taylor AM, Cherniack AD, Akbani R, Suphavilai C, Nagarajan N, Stuart JM, Mills GB, Wyczalkowski MA, Vincent BG, Hutter CM, Zenklusen JC, Hoadley KA, Wendl MC, Shmulevich L, Lazar AJ, Wheeler DA, Getz G; Cancer Genome Atlas Research Network.

Cell. 2018 Apr 5;173(2):305-320.e10. doi: 10.1016/j.cell.2018.03.033.

35.

Longitudinal Patterns of Electronic Teen Dating Violence Among Middle School Students.

Cutbush S, Williams J, Miller S, Gibbs D, Clinton-Sherrod M.

J Interpers Violence. 2018 Mar 1:886260518758326. doi: 10.1177/0886260518758326. [Epub ahead of print]

PMID:
29606057
36.

AxonTracer: a novel ImageJ plugin for automated quantification of axon regeneration in spinal cord tissue.

Patel A, Li Z, Canete P, Strobl H, Dulin J, Kadoya K, Gibbs D, Poplawski GHD.

BMC Neurosci. 2018 Mar 9;19(1):8. doi: 10.1186/s12868-018-0409-0.

37.

What the Data Say About HIM Professional Trends.

Marc DT, Robertson J, Gordon L, Green-Lawson ZD, Gibbs D, Dover K, Dougherty M.

J AHIMA. 2017 May;88(5):25-31. No abstract available.

PMID:
29419961
38.

Developmental control of hypoxia during bud burst in grapevine.

Meitha K, Agudelo-Romero P, Signorelli S, Gibbs DJ, Considine JA, Foyer CH, Considine MJ.

Plant Cell Environ. 2018 May;41(5):1154-1170. doi: 10.1111/pce.13141. Epub 2018 Feb 28.

39.

Injured adult motor and sensory axons regenerate into appropriate organotypic domains of neural progenitor grafts.

Dulin JN, Adler AF, Kumamaru H, Poplawski GHD, Lee-Kubli C, Strobl H, Gibbs D, Kadoya K, Fawcett JW, Lu P, Tuszynski MH.

Nat Commun. 2018 Jan 8;9(1):84. doi: 10.1038/s41467-017-02613-x.

40.

N-term 2017: Proteostasis via the N-terminus.

Dissmeyer N, Graciet E, Holdsworth MJ, Gibbs DJ.

Trends Biochem Sci. 2019 Apr;44(4):293-295. doi: 10.1016/j.tibs.2017.11.006. Epub 2017 Dec 9.

41.

N-terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N-end rule pathway.

Zhang H, Gannon L, Hassall KL, Deery MJ, Gibbs DJ, Holdsworth MJ, van der Hoorn RAL, Lilley KS, Theodoulou FL.

New Phytol. 2018 May;218(3):1106-1126. doi: 10.1111/nph.14909. Epub 2017 Nov 23.

42.

The ISB Cancer Genomics Cloud: A Flexible Cloud-Based Platform for Cancer Genomics Research.

Reynolds SM, Miller M, Lee P, Leinonen K, Paquette SM, Rodebaugh Z, Hahn A, Gibbs DL, Slagel J, Longabaugh WJ, Dhankani V, Reyes M, Pihl T, Backus M, Bookman M, Deflaux N, Bingham J, Pot D, Shmulevich I.

Cancer Res. 2017 Nov 1;77(21):e7-e10. doi: 10.1158/0008-5472.CAN-17-0617.

43.

Associations of MC1R Genotype and Patient Phenotypes with BRAF and NRAS Mutations in Melanoma.

Thomas NE, Edmiston SN, Kanetsky PA, Busam KJ, Kricker A, Armstrong BK, Cust AE, Anton-Culver H, Gruber SB, Luo L, Orlow I, Reiner AS, Gallagher RP, Zanetti R, Rosso S, Sacchetto L, Dwyer T, Parrish EA, Hao H, Gibbs DC, Frank JS, Ollila DW, Begg CB, Berwick M, Conway K; GEM Study Group.

J Invest Dermatol. 2017 Dec;137(12):2588-2598. doi: 10.1016/j.jid.2017.07.832. Epub 2017 Aug 24.

44.

Parents' voices: "Our process of advocating for our child with autism." A meta-synthesis of parents' perspectives.

Boshoff K, Gibbs D, Phillips RL, Wiles L, Porter L.

Child Care Health Dev. 2018 Jan;44(1):147-160. doi: 10.1111/cch.12504. Epub 2017 Aug 23. Review.

PMID:
28833334
45.

Animal-assisted interventions: A national survey of health and safety policies in hospitals, eldercare facilities, and therapy animal organizations.

Linder DE, Siebens HC, Mueller MK, Gibbs DM, Freeman LM.

Am J Infect Control. 2017 Aug 1;45(8):883-887. doi: 10.1016/j.ajic.2017.04.287. Epub 2017 Jun 30.

46.

Functional melanoma-risk variant IRF4 rs12203592 associated with Breslow thickness: a pooled international study of primary melanomas.

Gibbs DC, Ward SV, Orlow I, Cadby G, Kanetsky PA, Luo L, Busam KJ, Kricker A, Armstrong BK, Cust AE, Anton-Culver H, Gallagher RP, Zanetti R, Rosso S, Sacchetto L, Ollila DW, Begg CB, Berwick M, Thomas NE; GEM Study Group.

Br J Dermatol. 2017 Nov;177(5):e180-e182. doi: 10.1111/bjd.15784. Epub 2017 Oct 6. No abstract available.

47.

Solving the influence maximization problem reveals regulatory organization of the yeast cell cycle.

Gibbs DL, Shmulevich I.

PLoS Comput Biol. 2017 Jun 19;13(6):e1005591. doi: 10.1371/journal.pcbi.1005591. eCollection 2017 Jun. Erratum in: PLoS Comput Biol. 2018 May 23;14(5):e1006190.

48.

Evaluating Motivation for the Use of an Electronic Health Record Simulation Game.

McLeod A, Hewitt B, Gibbs D, Kristof C.

Perspect Health Inf Manag. 2017 Apr 1;14(Spring):1d. eCollection 2017 Spring.

49.

Repression of phosphatidylinositol transfer protein α ameliorates the pathology of Duchenne muscular dystrophy.

Vieira NM, Spinazzola JM, Alexander MS, Moreira YB, Kawahara G, Gibbs DE, Mead LC, Verjovski-Almeida S, Zatz M, Kunkel LM.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):6080-6085. doi: 10.1073/pnas.1703556114. Epub 2017 May 22.

50.

Identifying hotspots and management of critical ecosystem services in rapidly urbanizing Yangtze River Delta Region, China.

Cai W, Gibbs D, Zhang L, Ferrier G, Cai Y.

J Environ Manage. 2017 Apr 15;191:258-267. doi: 10.1016/j.jenvman.2017.01.003. Epub 2017 Jan 21.

PMID:
28119168

Supplemental Content

Support Center