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Items: 1 to 50 of 103

1.

Biological and Molecular Properties of Wild potato mosaic virus Isolates from Pepino (Solanum muricatum).

Fribourg CE, Gibbs AJ, Adams IP, Boonham N, Jones RAC.

Plant Dis. 2019 May 13:PDIS12182164RE. doi: 10.1094/PDIS-12-18-2164-RE. [Epub ahead of print]

PMID:
31082318
2.

Metagenomes of a Freshwater Charavirus from British Columbia Provide a Window into Ancient Lineages of Viruses.

Vlok M, Gibbs AJ, Suttle CA.

Viruses. 2019 Mar 25;11(3). pii: E299. doi: 10.3390/v11030299.

3.

The Biology and Phylogenetics of Potato virus S Isolates from the Andean Region of South America.

Santillan FW, Fribourg CE, Adams IP, Gibbs AJ, Boonham N, Kehoe MA, Maina S, Jones RAC.

Plant Dis. 2018 May;102(5):869-885. doi: 10.1094/PDIS-09-17-1414-RE. Epub 2018 Mar 1.

PMID:
30673374
4.

An Iranian genomic sequence of Beet mosaic virus provides insights into diversity and evolution of the world population.

Mohammadi M, Gibbs AJ, Hosseini A, Hosseini S.

Virus Genes. 2018 Apr;54(2):272-279. doi: 10.1007/s11262-018-1533-8. Epub 2018 Jan 12.

PMID:
29330664
5.

The genetic diversity of narcissus viruses related to turnip mosaic virus blur arbitrary boundaries used to discriminate potyvirus species.

Ohshima K, Mitoma S, Gibbs AJ.

PLoS One. 2018 Jan 4;13(1):e0190511. doi: 10.1371/journal.pone.0190511. eCollection 2018.

6.

Rymovirus: a cautionary tale.

Gibbs AJ, Gibbs MJ.

Arch Virol. 2018 Mar;163(3):815-817. doi: 10.1007/s00705-017-3676-7. Epub 2017 Dec 9.

PMID:
29224129
7.

The Timescale of Emergence and Spread of Turnip Mosaic Potyvirus.

Yasaka R, Fukagawa H, Ikematsu M, Soda H, Korkmaz S, Golnaraghi A, Katis N, Ho SYW, Gibbs AJ, Ohshima K.

Sci Rep. 2017 Jun 26;7(1):4240. doi: 10.1038/s41598-017-01934-7.

8.

The phylogenetics of the global population of potato virus Y and its necrogenic recombinants.

Gibbs AJ, Ohshima K, Yasaka R, Mohammadi M, Gibbs MJ, Jones RAC.

Virus Evol. 2017 Mar 2;3(1):vex002. doi: 10.1093/ve/vex002. eCollection 2017 Jan.

9.

Tobamoviruses have probably co-diverged with their eudicotyledonous hosts for at least 110 million years.

Gibbs AJ, Wood J, Garcia-Arenal F, Ohshima K, Armstrong JS.

Virus Evol. 2015 Dec 16;1(1):vev019. eCollection 2015.

10.

Themes and variations: An exploratory international investigation into resuscitation decision-making.

Gibbs AJO, Malyon AC, Fritz ZBM.

Resuscitation. 2016 Jun;103:75-81. doi: 10.1016/j.resuscitation.2016.01.020. Epub 2016 Mar 11.

11.

Temporal analysis of reassortment and molecular evolution of Cucumber mosaic virus: Extra clues from its segmented genome.

Ohshima K, Matsumoto K, Yasaka R, Nishiyama M, Soejima K, Korkmaz S, Ho SY, Gibbs AJ, Takeshita M.

Virology. 2016 Jan;487:188-97. doi: 10.1016/j.virol.2015.09.024. Epub 2015 Nov 3.

12.

The 'emergence' of turnip mosaic virus was probably a 'gene-for-quasi-gene' event.

Gibbs AJ, Nguyen HD, Ohshima K.

Curr Opin Virol. 2015 Feb;10:20-6. doi: 10.1016/j.coviro.2014.12.004. Epub 2015 Jan 2. Review.

PMID:
25559881
13.

Phylodynamic evidence of the migration of turnip mosaic potyvirus from Europe to Australia and New Zealand.

Yasaka R, Ohba K, Schwinghamer MW, Fletcher J, Ochoa-Corona FM, Thomas JE, Ho SY, Gibbs AJ, Ohshima K.

J Gen Virol. 2015 Mar;96(Pt 3):701-13. doi: 10.1099/jgv.0.000007. Epub 2014 Dec 6.

PMID:
25481753
14.

The temporal evolution and global spread of Cauliflower mosaic virus, a plant pararetrovirus.

Yasaka R, Nguyen HD, Ho SY, Duchêne S, Korkmaz S, Katis N, Takahashi H, Gibbs AJ, Ohshima K.

PLoS One. 2014 Jan 21;9(1):e85641. doi: 10.1371/journal.pone.0085641. eCollection 2014. Erratum in: PLoS One. 2014;9(4):e95410. PLoS One. 2014;9(4):e85641.

15.

Viral taxonomy needs a spring clean; its exploration era is over.

Gibbs AJ.

Virol J. 2013 Aug 9;10:254. doi: 10.1186/1743-422X-10-254.

16.

Turnip mosaic potyvirus probably first spread to Eurasian brassica crops from wild orchids about 1000 years ago.

Nguyen HD, Tomitaka Y, Ho SY, Duchêne S, Vetten HJ, Lesemann D, Walsh JA, Gibbs AJ, Ohshima K.

PLoS One. 2013;8(2):e55336. doi: 10.1371/journal.pone.0055336. Epub 2013 Feb 6.

17.

The enigmatic genome of Chara australis virus.

Gibbs AJ, Torronen M, Mackenzie AM, Wood JT 2nd, Armstrong JS, Kondo H, Tamada T, Keese PL.

J Gen Virol. 2011 Nov;92(Pt 11):2679-90. doi: 10.1099/vir.0.033852-0. Epub 2011 Jul 6.

PMID:
21733884
18.

Evolutionary dynamics of the N1 neuraminidases of the main lineages of influenza A viruses.

Fourment M, Wood JT, Gibbs AJ, Gibbs MJ.

Mol Phylogenet Evol. 2010 Aug;56(2):526-35. doi: 10.1016/j.ympev.2010.04.039. Epub 2010 Apr 29.

PMID:
20434570
19.

From where did the 2009 'swine-origin' influenza A virus (H1N1) emerge?

Gibbs AJ, Armstrong JS, Downie JC.

Virol J. 2009 Nov 24;6:207. doi: 10.1186/1743-422X-6-207.

20.

Evolutionary trajectory of turnip mosaic virus populations adapting to a new host.

Ohshima K, Akaishi S, Kajiyama H, Koga R, Gibbs AJ.

J Gen Virol. 2010 Mar;91(Pt 3):788-801. doi: 10.1099/vir.0.016055-0. Epub 2009 Nov 11.

PMID:
19906944
21.

Time--the emerging dimension of plant virus studies.

Gibbs AJ, Fargette D, García-Arenal F, Gibbs MJ.

J Gen Virol. 2010 Jan;91(Pt 1):13-22. doi: 10.1099/vir.0.015925-0. Epub 2009 Nov 4. Review.

PMID:
19889925
22.

The bean common mosaic virus lineage of potyviruses: where did it arise and when?

Gibbs AJ, Trueman JW, Gibbs MJ.

Arch Virol. 2008;153(12):2177-87. doi: 10.1007/s00705-008-0256-x. Epub 2008 Nov 22. Review.

PMID:
19030956
23.

SWeBLAST: a Sliding Window Web-based BLAST tool for recombinant analysis.

Fourment M, Gibbs AJ, Gibbs MJ.

J Virol Methods. 2008 Sep;152(1-2):98-101. doi: 10.1016/j.jviromet.2008.06.009. Epub 2008 Jul 17.

PMID:
18602951
24.

The prehistory of potyviruses: their initial radiation was during the dawn of agriculture.

Gibbs AJ, Ohshima K, Phillips MJ, Gibbs MJ.

PLoS One. 2008 Jun 25;3(6):e2523. doi: 10.1371/journal.pone.0002523.

25.

The potyviruses of Australia.

Gibbs AJ, Mackenzie AM, Wei KJ, Gibbs MJ.

Arch Virol. 2008;153(8):1411-20. doi: 10.1007/s00705-008-0134-6. Epub 2008 Jun 20.

PMID:
18566735
26.

Accumulating variation at conserved sites in potyvirus genomes is driven by species discovery and affects degenerate primer design.

Zheng L, Wayper PJ, Gibbs AJ, Fourment M, Rodoni BC, Gibbs MJ.

PLoS One. 2008 Feb 13;3(2):e1586. doi: 10.1371/journal.pone.0001586.

27.

Wheat streak mosaic virus in Australia: Relationship to Isolates from the Pacific Northwest of the USA and Its Dispersion Via Seed Transmission.

Dwyer GI, Gibbs MJ, Gibbs AJ, Jones RAC.

Plant Dis. 2007 Feb;91(2):164-170. doi: 10.1094/PDIS-91-2-0164.

PMID:
30780999
28.

Transient transmission of porcine endogenous retrovirus to fetal lambs after pig islet tissue xenotransplantation.

Popp SK, Mann DA, Milburn PJ, Gibbs AJ, McCullagh PJ, Wilson JD, Tönjes RR, Simeonovic CJ.

Immunol Cell Biol. 2007 Apr-May;85(3):238-48. Epub 2007 Jan 16.

PMID:
17228325
29.

Patterns of recombination in turnip mosaic virus genomic sequences indicate hotspots of recombination.

Ohshima K, Tomitaka Y, Wood JT, Minematsu Y, Kajiyama H, Tomimura K, Gibbs AJ.

J Gen Virol. 2007 Jan;88(Pt 1):298-315.

PMID:
17170463
30.

The variable codons of H3 influenza A virus haemagglutinin genes.

Gibbs MJ, Wayper P, Fourment ML, Wood JT, Ohshima K, Armstrong JS, Gibbs AJ.

Arch Virol. 2007 Jan;152(1):11-24. Epub 2006 Sep 8.

PMID:
16957828
31.

A broader definition of 'the virus species'.

Gibbs AJ, Gibbs MJ.

Arch Virol. 2006 Jul;151(7):1419-22. Epub 2006 May 22.

PMID:
16718358
32.

Molecular virology: was the 1918 pandemic caused by a bird flu?

Gibbs MJ, Gibbs AJ.

Nature. 2006 Apr 27;440(7088):E8; discussion E9-10.

PMID:
16641948
33.

Porcine endogenous retrovirus encodes xenoantigens involved in porcine cellular xenograft rejection by mice.

Simeonovic CJ, Ziolkowski AF, Popp SK, Milburn PJ, Lynch CA, Hamilton P, Harris K, Brown DJ, Bain SA, Wilson JD, Gibbs AJ.

Transplantation. 2005 Jun 27;79(12):1674-82.

PMID:
15973168
34.
35.

A type of nucleotide motif that distinguishes tobamovirus species more efficiently than nucleotide signatures.

Gibbs AJ, Armstrong JS, Gibbs MJ.

Arch Virol. 2004 Oct;149(10):1941-54.

PMID:
15669106
36.

Mutations in Turnip mosaic virus genomes that have adapted to Raphanus sativus.

Tan Z, Gibbs AJ, Tomitaka Y, Sánchez F, Ponz F, Ohshima K.

J Gen Virol. 2005 Feb;86(Pt 2):501-10.

PMID:
15659771
37.

Comparisons of the genetic structure of populations of Turnip mosaic virus in West and East Eurasia.

Tomimura K, Spak J, Katis N, Jenner CE, Walsh JA, Gibbs AJ, Ohshima K.

Virology. 2004 Dec 20;330(2):408-23. Erratum in: Virology. 2005 Mar 30;334(1):145.

38.

The phylogeny of SARS coronavirus.

Gibbs AJ, Gibbs MJ, Armstrong JS.

Arch Virol. 2004 Mar;149(3):621-4. Epub 2004 Jan 5.

PMID:
14991447
39.
40.

Viral nomenclature, where next?

Gibbs AJ.

Arch Virol. 2003 Aug;148(8):1645-53. Review. No abstract available.

PMID:
12898338
41.

The phylogeny of Turnip mosaic virus; comparisons of 38 genomic sequences reveal a Eurasian origin and a recent 'emergence' in east Asia.

Tomimura K, Gibbs AJ, Jenner CE, Walsh JA, Ohshima K.

Mol Ecol. 2003 Aug;12(8):2099-111.

PMID:
12859632
42.

Prevention of weight loss in dementia with comprehensive nutritional treatment.

Keller HH, Gibbs AJ, Boudreau LD, Goy RE, Pattillo MS, Brown HM.

J Am Geriatr Soc. 2003 Jul;51(7):945-52.

PMID:
12834514
43.

Potyviruses, novel and known, in cultivated and wild species of the family Apiaceae in Australia.

Moran J, van Rijswijk B, Traicevski V, Kitajima EW, Mackenzie AM, Gibbs AJ.

Arch Virol. 2002 Oct;147(10):1855-67.

PMID:
12376749
44.

On the evolution and molecular epidemiology of the potyvirus Papaya ringspot virus.

Bateson MF, Lines RE, Revill P, Chaleeprom W, Ha CV, Gibbs AJ, Dale JL.

J Gen Virol. 2002 Oct;83(Pt 10):2575-85.

PMID:
12237441
45.

The haemagglutinin gene, but not the neuraminidase gene, of 'Spanish flu' was a recombinant.

Gibbs MJ, Armstrong JS, Gibbs AJ.

Philos Trans R Soc Lond B Biol Sci. 2001 Dec 29;356(1416):1845-55.

46.

Recombination in the hemagglutinin gene of the 1918 "Spanish flu".

Gibbs MJ, Armstrong JS, Gibbs AJ.

Science. 2001 Sep 7;293(5536):1842-5.

47.

Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences.

Gibbs MJ, Armstrong JS, Gibbs AJ.

Bioinformatics. 2000 Jul;16(7):573-82.

PMID:
11038328
48.

Virus nomenclature descending into chaos.

Gibbs AJ.

Arch Virol. 2000;145(7):1505-7. No abstract available.

PMID:
10963355
49.

Australian isolates of ryegrass mosaic rymovirus and their relationships.

Mackenzie AM, Webster DE, Gibbs MJ, Thomas BJ, Gibbs AJ.

Arch Virol. 1999;144(2):309-16.

PMID:
10470255
50.

Ceratobium mosaic potyvirus: another virus from orchids.

Mackenzie AM, Nolan M, Wei KJ, Clements MA, Gowanlock D, Wallace BJ, Gibbs AJ.

Arch Virol. 1998;143(5):903-14.

PMID:
9645197

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