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Items: 11

1.

WiPP: Workflow for Improved Peak Picking for Gas Chromatography-Mass Spectrometry (GC-MS) Data.

Borgsmüller N, Gloaguen Y, Opialla T, Blanc E, Sicard E, Royer AL, Le Bizec B, Durand S, Migné C, Pétéra M, Pujos-Guillot E, Giacomoni F, Guitton Y, Beule D, Kirwan J.

Metabolites. 2019 Aug 21;9(9). pii: E171. doi: 10.3390/metabo9090171.

PMID:
31438611
2.

Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies.

Ulaszewska MM, Weinert CH, Trimigno A, Portmann R, Andres Lacueva C, Badertscher R, Brennan L, Brunius C, Bub A, Capozzi F, Cialiè Rosso M, Cordero CE, Daniel H, Durand S, Egert B, Ferrario PG, Feskens EJM, Franceschi P, Garcia-Aloy M, Giacomoni F, Giesbertz P, González-Domínguez R, Hanhineva K, Hemeryck LY, Kopka J, Kulling SE, Llorach R, Manach C, Mattivi F, Migné C, Münger LH, Ott B, Picone G, Pimentel G, Pujos-Guillot E, Riccadonna S, Rist MJ, Rombouts C, Rubert J, Skurk T, Sri Harsha PSC, Van Meulebroek L, Vanhaecke L, Vázquez-Fresno R, Wishart D, Vergères G.

Mol Nutr Food Res. 2019 Jan;63(1):e1800384. doi: 10.1002/mnfr.201800384. Epub 2018 Oct 11. Review.

PMID:
30176196
3.

The future of metabolomics in ELIXIR.

van Rijswijk M, Beirnaert C, Caron C, Cascante M, Dominguez V, Dunn WB, Ebbels TMD, Giacomoni F, Gonzalez-Beltran A, Hankemeier T, Haug K, Izquierdo-Garcia JL, Jimenez RC, Jourdan F, Kale N, Klapa MI, Kohlbacher O, Koort K, Kultima K, Le Corguillé G, Moreno P, Moschonas NK, Neumann S, O'Donovan C, Reczko M, Rocca-Serra P, Rosato A, Salek RM, Sansone SA, Satagopam V, Schober D, Shimmo R, Spicer RA, Spjuth O, Thévenot EA, Viant MR, Weber RJM, Willighagen EL, Zanetti G, Steinbeck C.

Version 2. F1000Res. 2017 Sep 6 [revised 2017 Jan 1];6. pii: ELIXIR-1649. doi: 10.12688/f1000research.12342.2. eCollection 2017.

4.

Create, run, share, publish, and reference your LC-MS, FIA-MS, GC-MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics.

Guitton Y, Tremblay-Franco M, Le Corguillé G, Martin JF, Pétéra M, Roger-Mele P, Delabrière A, Goulitquer S, Monsoor M, Duperier C, Canlet C, Servien R, Tardivel P, Caron C, Giacomoni F, Thévenot EA.

Int J Biochem Cell Biol. 2017 Dec;93:89-101. doi: 10.1016/j.biocel.2017.07.002. Epub 2017 Jul 12.

PMID:
28710041
5.

A Computational Solution to Automatically Map Metabolite Libraries in the Context of Genome Scale Metabolic Networks.

Merlet B, Paulhe N, Vinson F, Frainay C, Chazalviel M, Poupin N, Gloaguen Y, Giacomoni F, Jourdan F.

Front Mol Biosci. 2016 Feb 16;3:2. doi: 10.3389/fmolb.2016.00002. eCollection 2016.

6.

Can we trust untargeted metabolomics? Results of the metabo-ring initiative, a large-scale, multi-instrument inter-laboratory study.

Martin JC, Maillot M, Mazerolles G, Verdu A, Lyan B, Migné C, Defoort C, Canlet C, Junot C, Guillou C, Manach C, Jabob D, Bouveresse DJ, Paris E, Pujos-Guillot E, Jourdan F, Giacomoni F, Courant F, Favé G, Le Gall G, Chassaigne H, Tabet JC, Martin JF, Antignac JP, Shintu L, Defernez M, Philo M, Alexandre-Gouaubau MC, Amiot-Carlin MJ, Bossis M, Triba MN, Stojilkovic N, Banzet N, Molinié R, Bott R, Goulitquer S, Caldarelli S, Rutledge DN.

Metabolomics. 2015;11(4):807-821. Epub 2014 Oct 14.

7.

Assessment of protein modifications in liver of rats under chronic treatment with paracetamol (acetaminophen) using two complementary mass spectrometry-based metabolomic approaches.

Mast C, Lyan B, Joly C, Centeno D, Giacomoni F, Martin JF, Mosoni L, Dardevet D, Pujos-Guillot E, Papet I.

J Proteomics. 2015 Apr 29;120:194-203. doi: 10.1016/j.jprot.2015.03.014. Epub 2015 Mar 24.

PMID:
25817778
8.

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics.

Giacomoni F, Le Corguillé G, Monsoor M, Landi M, Pericard P, Pétéra M, Duperier C, Tremblay-Franco M, Martin JF, Jacob D, Goulitquer S, Thévenot EA, Caron C.

Bioinformatics. 2015 May 1;31(9):1493-5. doi: 10.1093/bioinformatics/btu813. Epub 2014 Dec 19.

9.

TriAnnot: A Versatile and High Performance Pipeline for the Automated Annotation of Plant Genomes.

Leroy P, Guilhot N, Sakai H, Bernard A, Choulet F, Theil S, Reboux S, Amano N, Flutre T, Pelegrin C, Ohyanagi H, Seidel M, Giacomoni F, Reichstadt M, Alaux M, Gicquello E, Legeai F, Cerutti L, Numa H, Tanaka T, Mayer K, Itoh T, Quesneville H, Feuillet C.

Front Plant Sci. 2012 Jan 31;3:5. doi: 10.3389/fpls.2012.00005. eCollection 2012.

10.

Impairment of recognition memory with, but not without, conscious recollection in schizophrenia.

Huron C, Danion JM, Giacomoni F, Grangé D, Robert P, Rizzo L.

Am J Psychiatry. 1995 Dec;152(12):1737-42.

PMID:
8526239
11.

[Efficacy of antidepressants and thymoregulators in the long-term evolution of depression].

Pringuey D, Robert P, Giacomoni F, Talichet L, Darcourt G.

Encephale. 1995 Mar;21 Spec No 2:61-70. Review. French.

PMID:
7588182

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