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Items: 42

1.

Pigeon circoviruses from feral pigeons in Australia demonstrate extensive recombination and genetic admixture with other circoviruses.

Sarker S, Das S, Ghorashi SA, Forwood JK, Raidal SR.

Avian Pathol. 2019 Jul 11:1-9. doi: 10.1080/03079457.2019.1629391. [Epub ahead of print]

PMID:
31199167
2.

Critical Percolation without Fine-Tuning on the Surface of a Topological Superconductor.

Ghorashi SAA, Liao Y, Foster MS.

Phys Rev Lett. 2018 Jul 6;121(1):016802. doi: 10.1103/PhysRevLett.121.016802.

PMID:
30028162
3.

Evaluation of Two Multiplex PCR-High-Resolution Melt Curve Analysis Methods for Differentiation of Campylobacter jejuni and Campylobacter coli Intraspecies.

Banowary B, Dang VT, Sarker S, Connolly JH, Chenu J, Groves P, Raidal S, Ghorashi SA.

Avian Dis. 2018 Mar;62(1):86-93. doi: 10.1637/11739-080417-Reg.1.

PMID:
29620472
4.

Maximum Likelihood Estimation for Multiple Camera Target Tracking on Grassmann Tangent Subspace.

Amini-Omam M, Torkamani-Azar F, Ghorashi SA.

IEEE Trans Cybern. 2018 Jan;48(1):77-89. doi: 10.1109/TCYB.2016.2624309. Epub 2016 Nov 15.

PMID:
28113965
5.

Evaluation of PCR and high-resolution melt curve analysis for differentiation of Salmonella isolates.

Saeidabadi MS, Nili H, Dadras H, Sharifiyazdi H, Connolly J, Valcanis M, Raidal S, Ghorashi SA.

Avian Pathol. 2017 Jun;46(3):319-331. doi: 10.1080/03079457.2016.1268676. Epub 2017 Feb 15.

PMID:
28000500
6.

Characterization of Beak and Feather Disease Virus Genomes from Wild Musk Lorikeets (Glossopsitta concinna).

Das S, Subir S, Adriaanse K, Forwood JK, Ghorashi SA, Raidal SR.

Genome Announc. 2016 Oct 6;4(5). pii: e01107-16. doi: 10.1128/genomeA.01107-16.

7.

Molecular Characterization of a Beak and Feather Disease Virus Genome from a Purple Crowned Lorikeet (Glossopsitta porphyrocephala).

Das S, Subir S, Fearnside K, Forwood JK, Ghorashi SA, Raidal SR.

Genome Announc. 2016 Oct 6;4(5). pii: e01102-16. doi: 10.1128/genomeA.01102-16.

8.

Whole-Genome Sequence of a Beak and Feather Disease Virus Isolate from a Fledgling Red-Capped Parrot (Purpureicephalus spurius).

Das S, Subir S, Forwood JK, Ghorashi SA, Raidal SR.

Genome Announc. 2016 Oct 13;4(5). pii: e01108-16. doi: 10.1128/genomeA.01108-16.

9.

A comparison of PCR assays for beak and feather disease virus and high resolution melt (HRM) curve analysis of replicase associated protein and capsid genes.

Das S, Sarker S, Ghorashi SA, Forwood JK, Raidal SR.

J Virol Methods. 2016 Nov;237:47-57. doi: 10.1016/j.jviromet.2016.08.015. Epub 2016 Aug 23.

PMID:
27565820
10.

Phylogenetic relationships among Linguatula serrata isolates from Iran based on 18S rRNA and mitochondrial cox1 gene sequences.

Ghorashi SA, Tavassoli M, Peters A, Shamsi S, Hajipour N.

Acta Parasitol. 2016 Jan;61(1):195-200.

PMID:
27149706
11.

Evolution of circoviruses in lorikeets lags behind its hosts.

Das S, Sarker S, Peters A, Ghorashi SA, Phalen D, Forwood JK, Raidal SR.

Mol Phylogenet Evol. 2016 Jul;100:281-291. doi: 10.1016/j.ympev.2016.04.024. Epub 2016 Apr 23.

PMID:
27118178
12.

Beak and feather disease virus genotypes in Australian parrots reveal flexible host-switching.

Sarker S, Forwood JK, Ghorashi SA, Peters A, Raidal SR.

Aust Vet J. 2015 Dec;93(12):471-5. doi: 10.1111/avj.12389.

PMID:
26769073
13.

Evidence of a deep viral host switch event with beak and feather disease virus infection in rainbow bee-eaters (Merops ornatus).

Sarker S, Moylan KG, Ghorashi SA, Forwood JK, Peters A, Raidal SR.

Sci Rep. 2015 Sep 28;5:14511. doi: 10.1038/srep14511.

14.

Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis.

Banowary B, Dang VT, Sarker S, Connolly JH, Chenu J, Groves P, Ayton M, Raidal S, Devi A, Vanniasinkam T, Ghorashi SA.

PLoS One. 2015 Sep 22;10(9):e0138808. doi: 10.1371/journal.pone.0138808. eCollection 2015.

15.

Evaluation of the Capacity of PCR and High-Resolution Melt Curve Analysis for Identification of Mixed Infection with Mycoplasma gallisepticum Strains.

Ghorashi SA, Kanci A, Noormohammadi AH.

PLoS One. 2015 May 13;10(5):e0126824. doi: 10.1371/journal.pone.0126824. eCollection 2015.

16.

An efficient approach for recombinant expression and purification of the viral capsid protein from beak and feather disease virus (BFDV) in Escherichia coli.

Sarker S, Ghorashi SA, Swarbrick CM, Khandokar YB, Himiari Z, Forwood JK, Raidal SR.

J Virol Methods. 2015 Apr;215-216:1-8. doi: 10.1016/j.jviromet.2015.02.005. Epub 2015 Feb 16.

PMID:
25698466
17.

Erratum for Sarker et al., Molecular Characterization of Genome Sequences of Beak and Feather Disease Virus from the Australian Twenty-Eight Parrot (Barnardius zonarius semitorquatus).

Sarker S, Das S, Ghorashi SA, Forwood JK, Raidal SR.

Genome Announc. 2015 Jan 22;3(1). pii: e01546-14. doi: 10.1128/genomeA.01546-14. No abstract available.

18.

Molecular Characterization of Genome Sequences of Beak and Feather Disease Virus from the Australian Twenty-Eight Parrot (Barnardius zonarius semitorquatus).

Sarker S, Das S, Ghorashi SA, Forwood JK, Raidal SR.

Genome Announc. 2014 Dec 4;2(6). pii: e01255-14. doi: 10.1128/genomeA.01255-14. Erratum in: Genome Announc. 2015 Jan 22;3(1):.

19.

Rapid genotyping of beak and feather disease virus using high-resolution DNA melt curve analysis.

Sarker S, Ghorashi SA, Forwood JK, Raidal SR.

J Virol Methods. 2014 Nov;208:47-55. doi: 10.1016/j.jviromet.2014.07.031. Epub 2014 Aug 4.

PMID:
25102431
20.

Characterization of the Whole-Genome Sequence of a Beak and Feather Disease Virus Isolate from a Mallee Ringneck Parrot (Barnardius zonarius barnardi).

Das S, Sarker S, Forwood JK, Ghorashi SA, Raidal SR.

Genome Announc. 2014 Jul 24;2(4). pii: e00708-14. doi: 10.1128/genomeA.00708-14.

21.

Phylogeny of beak and feather disease virus in cockatoos demonstrates host generalism and multiple-variant infections within Psittaciformes.

Sarker S, Ghorashi SA, Forwood JK, Bent SJ, Peters A, Raidal SR.

Virology. 2014 Jul;460-461:72-82. doi: 10.1016/j.virol.2014.04.021. Epub 2014 May 29.

22.

Evidence of psittacine beak and feather disease virus spillover into wild critically endangered Orange-bellied Parrots (Neophema chrysogaster).

Peters A, Patterson EI, Baker BG, Holdsworth M, Sarker S, Ghorashi SA, Raidal SR.

J Wildl Dis. 2014 Apr;50(2):288-96. doi: 10.7589/2013-05-121. Epub 2014 Jan 31.

PMID:
24484492
23.

Whole-Genome Sequence Characterization of a Beak and Feather Disease Virus in a Wild Regent Parrot (Polytelis anthopeplus monarchoides).

Sarker S, Forwood JK, Ghorashi SA, McLelland D, Peters A, Raidal SR.

Genome Announc. 2014 Jan 30;2(1). pii: e01243-13. doi: 10.1128/genomeA.01243-13.

24.

Mutability dynamics of an emergent single stranded DNA virus in a naïve host.

Sarker S, Patterson EI, Peters A, Baker GB, Forwood JK, Ghorashi SA, Holdsworth M, Baker R, Murray N, Raidal SR.

PLoS One. 2014 Jan 8;9(1):e85370. doi: 10.1371/journal.pone.0085370. eCollection 2014.

25.

Characterization of the Complete Genome Sequence of a Beak and Feather Disease Virus from a Moluccan Red Lory (Eos bornea).

Sarker S, Ghorashi SA, Forwood JK, Metz S, Raidal SR.

Genome Announc. 2013 Nov 27;1(6). pii: e00844-13. doi: 10.1128/genomeA.00844-13.

26.

Whole-Genome Sequences of Two Beak and Feather Disease Viruses in the Endangered Swift Parrot (Lathamus discolor).

Sarker S, Ghorashi SA, Forwood JK, Raidal SR.

Genome Announc. 2013 Nov 27;1(6). pii: e00842-13. doi: 10.1128/genomeA.00842-13.

27.

Comparison of multiple genes and 16S-23S rRNA intergenic space region for their capacity in high resolution melt curve analysis to differentiate Mycoplasma gallisepticum vaccine strain ts-11 from field strains.

Ghorashi SA, Bradbury JM, Ferguson-Noel NM, Noormohammadi AH.

Vet Microbiol. 2013 Dec 27;167(3-4):440-7. doi: 10.1016/j.vetmic.2013.09.032. Epub 2013 Oct 24.

PMID:
24238667
28.

Combination of differential growth at two different temperatures with a quantitative real-time polymerase chain reaction to determine temperature-sensitive phenotype of Mycoplasma synoviae.

Shahid MA, Ghorashi SA, Agnew-Crumpton R, Markham PF, Marenda MS, Noormohammadi AH.

Avian Pathol. 2013 Apr;42(2):185-91. doi: 10.1080/03079457.2013.779363.

PMID:
23581447
29.

Thermal Solid Sample Introduction-Fast Gas Chromatography-Low Flow Ion Mobility Spectrometry as a field screening detection system.

Hajialigol S, Ghorashi SA, Alinoori AH, Torabpour A, Azimi M.

J Chromatogr A. 2012 Dec 14;1268:123-9. doi: 10.1016/j.chroma.2012.10.010. Epub 2012 Oct 13.

PMID:
23141709
30.

Identification of Hepatitis B Virus Surface Antigen (HBsAg) Genotypes and Variations in Chronic Carriers from Isfahan Province, Iran.

Norouzi M, Ghorashi S, Abedi F, Nejatizadeh A, Ataei B, Malekzadeh R, Alavian S, Judaki M, Ghamari S, Namazi A, Rahimnia R, Khedive A, Jazayeri S.

Iran J Public Health. 2012;41(3):104-11. Epub 2012 Mar 31.

31.

Evolutionary characterization of hemagglutinin gene of H9N2 influenza viruses isolated from Asia.

Shahsavandi S, Salmanian AH, Ghorashi SA, Masoudi S, Ebrahimi MM.

Res Vet Sci. 2012 Aug;93(1):234-9. doi: 10.1016/j.rvsc.2011.07.033. Epub 2011 Sep 9.

PMID:
21907373
32.

Application of high-resolution melting curve analysis for typing of fowl adenoviruses in field cases of inclusion body hepatitis.

Steer PA, O'Rourke D, Ghorashi SA, Noormohammadi AH.

Aust Vet J. 2011 May;89(5):184-92. doi: 10.1111/j.1751-0813.2011.00695.x.

PMID:
21495991
33.

Differentiation of infectious bursal disease virus strains using real-time RT-PCR and high resolution melt curve analysis.

Ghorashi SA, O'Rourke D, Ignjatovic J, Noormohammadi AH.

J Virol Methods. 2011 Jan;171(1):264-71. doi: 10.1016/j.jviromet.2010.11.013. Epub 2010 Nov 24.

PMID:
21111004
34.

Development of rHA1-ELISA for specific and sensitive detection of H9 subtype influenza virus.

Shahsavandi S, Salmanian AH, Ghorashi SA, Masoudi S, Fotouhi F, Ebrahimi MM.

J Virol Methods. 2011 Jan;171(1):260-3. doi: 10.1016/j.jviromet.2010.11.012. Epub 2010 Nov 24.

PMID:
21111002
35.

Specific subtyping of influenza A virus using a recombinant hemagglutinin protein expressed in baculovirus.

Shahsavandi S, Salmanian AH, Ghorashi SA, Masoudi S, Fotouhi F, Ebrahimi MM.

Mol Biol Rep. 2011 Jun;38(5):3293-8. doi: 10.1007/s11033-010-0434-2. Epub 2010 Nov 26.

PMID:
21110118
36.

Ethnic and geographic differentiation of Helicobacter pylori within Iran.

Latifi-Navid S, Ghorashi SA, Siavoshi F, Linz B, Massarrat S, Khegay T, Salmanian AH, Shayesteh AA, Masoodi M, Ghanadi K, Ganji A, Suerbaum S, Achtman M, Malekzadeh R, Falush D.

PLoS One. 2010 Mar 22;5(3):e9645. doi: 10.1371/journal.pone.0009645.

37.

Differentiation of Mycoplasma gallisepticum strains using PCR and high-resolution melting curve analysis.

Ghorashi SA, Noormohammadi AH, Markham PF.

Microbiology. 2010 Apr;156(Pt 4):1019-29. doi: 10.1099/mic.0.031351-0. Epub 2009 Dec 24.

PMID:
20035007
38.

Effect of a live Mycoplasma synoviae vaccine on the production of eggshell apex abnormalities induced by a M. synoviae infection preceded by an infection with infectious bronchitis virus D1466.

Feberwee A, Morrow CJ, Ghorashi SA, Noormohammadi AH, Landman WJ.

Avian Pathol. 2009 Oct;38(5):333-40. doi: 10.1080/03079450903183652.

PMID:
19937520
39.

Analysis of relationship between bovine lymphocyte antigen DRB3.2 alleles, somatic cell count and milk traits in Iranian Holstein population.

Pashmi M, Qanbari S, Ghorashi SA, Sharifi AR, Simianer H.

J Anim Breed Genet. 2009 Aug;126(4):296-303. doi: 10.1111/j.1439-0388.2008.00783.x.

PMID:
19630880
40.

A clinic-based screening of mutations in exons 31, 34, 35, 41, and 48 of LRRK2 in Iranian Parkinson's disease patients.

Shojaee S, Sina F, Farboodi N, Fazlali Z, Ghazavi F, Ghorashi SA, Parsa K, Sadeghi H, Shahidi GA, Ronaghi M, Elahi E.

Mov Disord. 2009 May 15;24(7):1023-7. doi: 10.1002/mds.22503.

PMID:
19353692
41.

PCR based RFLP genotyping of bovine lymphocyte antigen DRB3.2 in Iranian Holstein population.

Pashmi M, Qanbari S, Ghorashi SA, Salehi A.

Pak J Biol Sci. 2007 Feb 1;10(3):383-7.

PMID:
19069505
42.

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