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Items: 1 to 50 of 69

1.

Genetic interaction studies reveal superior performance of Rhizobium tropici CIAT899 on a range of diverse East African common bean (Phaseolus vulgaris L.) genotypes.

Gunnabo AH, Geurts R, Wolde-Meskel E, Degefu T, Giller KE, van Heerwaarden J.

Appl Environ Microbiol. 2019 Sep 27. pii: AEM.01763-19. doi: 10.1128/AEM.01763-19. [Epub ahead of print]

2.

Transforming, Genome Editing and Phenotyping the Nitrogen-fixing Tropical Cannabaceae Tree Parasponia andersonii.

Wardhani TAK, Roswanjaya YP, Dupin S, Li H, Linders S, Hartog M, Geurts R, van Zeijl A.

J Vis Exp. 2019 Aug 18;(150). doi: 10.3791/59971.

PMID:
31475981
3.

GeneNoteBook, a collaborative notebook for comparative genomics.

Holmer R, van Velzen R, Geurts R, Bisseling T, de Ridder D, Smit S.

Bioinformatics. 2019 Jun 14. pii: btz491. doi: 10.1093/bioinformatics/btz491. [Epub ahead of print]

PMID:
31199463
4.

A Remote cis-Regulatory Region Is Required for NIN Expression in the Pericycle to Initiate Nodule Primordium Formation in Medicago truncatula.

Liu J, Rutten L, Limpens E, van der Molen T, van Velzen R, Chen R, Chen Y, Geurts R, Kohlen W, Kulikova O, Bisseling T.

Plant Cell. 2019 Jan;31(1):68-83. doi: 10.1105/tpc.18.00478. Epub 2019 Jan 4.

PMID:
30610167
5.

Transcriptional Regulation of Nutrient Exchange in Arbuscular Mycorrhizal Symbiosis.

Limpens E, Geurts R.

Mol Plant. 2018 Dec 3;11(12):1421-1423. doi: 10.1016/j.molp.2018.11.003. Epub 2018 Nov 14. No abstract available.

PMID:
30447333
6.

A Resurrected Scenario: Single Gain and Massive Loss of Nitrogen-Fixing Nodulation.

van Velzen R, Doyle JJ, Geurts R.

Trends Plant Sci. 2019 Jan;24(1):49-57. doi: 10.1016/j.tplants.2018.10.005. Epub 2018 Nov 5. Review.

PMID:
30409687
7.

Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses.

van Velzen R, Holmer R, Bu F, Rutten L, van Zeijl A, Liu W, Santuari L, Cao Q, Sharma T, Shen D, Roswanjaya Y, Wardhani TAK, Kalhor MS, Jansen J, van den Hoogen J, Güngör B, Hartog M, Hontelez J, Verver J, Yang WC, Schijlen E, Repin R, Schilthuizen M, Schranz ME, Heidstra R, Miyata K, Fedorova E, Kohlen W, Bisseling T, Smit S, Geurts R.

Proc Natl Acad Sci U S A. 2018 May 15;115(20):E4700-E4709. doi: 10.1073/pnas.1721395115. Epub 2018 May 1.

8.

A genetically and functionally diverse group of non-diazotrophic Bradyrhizobium spp. colonizes the root endophytic compartment of Arabidopsis thaliana.

Schneijderberg M, Schmitz L, Cheng X, Polman S, Franken C, Geurts R, Bisseling T.

BMC Plant Biol. 2018 Apr 11;18(1):61. doi: 10.1186/s12870-018-1272-y.

9.

CRISPR/Cas9-Mediated Mutagenesis of Four Putative Symbiosis Genes of the Tropical Tree Parasponia andersonii Reveals Novel Phenotypes.

van Zeijl A, Wardhani TAK, Seifi Kalhor M, Rutten L, Bu F, Hartog M, Linders S, Fedorova EE, Bisseling T, Kohlen W, Geurts R.

Front Plant Sci. 2018 Mar 6;9:284. doi: 10.3389/fpls.2018.00284. eCollection 2018.

10.

High spatial variation in population size and symbiotic performance of Rhizobium leguminosarum bv. trifolii with white clover in New Zealand pasture soils.

Wakelin S, Tillard G, van Ham R, Ballard R, Farquharson E, Gerard E, Geurts R, Brown M, Ridgway H, O'Callaghan M.

PLoS One. 2018 Feb 28;13(2):e0192607. doi: 10.1371/journal.pone.0192607. eCollection 2018.

11.

Inter- and intracellular colonization of Arabidopsis roots by endophytic actinobacteria and the impact of plant hormones on their antimicrobial activity.

van der Meij A, Willemse J, Schneijderberg MA, Geurts R, Raaijmakers JM, van Wezel GP.

Antonie Van Leeuwenhoek. 2018 May;111(5):679-690. doi: 10.1007/s10482-018-1014-z. Epub 2018 Jan 15.

12.

Draft Genome Sequence of the Nitrogen-Fixing Rhizobium sullae Type Strain IS123T Focusing on the Key Genes for Symbiosis with its Host Hedysarum coronarium L.

Sablok G, Rosselli R, Seeman T, van Velzen R, Polone E, Giacomini A, La Porta N, Geurts R, Muresu R, Squartini A.

Front Microbiol. 2017 Jul 26;8:1348. doi: 10.3389/fmicb.2017.01348. eCollection 2017.

13.

Multiscale correlative tomography: an investigation of creep cavitation in 316 stainless steel.

Slater TJA, Bradley RS, Bertali G, Geurts R, Northover SM, Burke MG, Haigh SJ, Burnett TL, Withers PJ.

Sci Rep. 2017 Aug 4;7(1):7332. doi: 10.1038/s41598-017-06976-5.

14.

Draft Genome Sequence of the Plant Growth-Promoting Rhizobacterium Acinetobacter radioresistens Strain SA188 Isolated from the Desert Plant Indigofera argentea.

Lafi FF, Alam I, Bisseling T, Geurts R, Bajic VB, Hirt H, Saad MM.

Genome Announc. 2017 Mar 2;5(9). pii: e01708-16. doi: 10.1128/genomeA.01708-16.

15.

Draft Genome Sequence of Ochrobactrum intermedium Strain SA148, a Plant Growth-Promoting Desert Rhizobacterium.

Lafi FF, Alam I, Geurts R, Bisseling T, Bajic VB, Hirt H, Saad MM.

Genome Announc. 2017 Mar 2;5(9). pii: e01707-16. doi: 10.1128/genomeA.01707-16.

16.

Draft Genome Sequence of Enterobacter sp. Sa187, an Endophytic Bacterium Isolated from the Desert Plant Indigofera argentea.

Lafi FF, Alam I, Geurts R, Bisseling T, Bajic VB, Hirt H, Saad MM.

Genome Announc. 2017 Feb 16;5(7). pii: e01638-16. doi: 10.1128/genomeA.01638-16.

17.

Draft Genome Sequence of the Phosphate-Solubilizing Bacterium Pseudomonas argentinensis Strain SA190 Isolated from the Desert Plant Indigofera argentea.

Lafi FF, Alam I, Geurts R, Bisseling T, Bajic VB, Hirt H, Saad MM.

Genome Announc. 2016 Dec 22;4(6). pii: e01431-16. doi: 10.1128/genomeA.01431-16.

19.

Direct imaging of glycans in Arabidopsis roots via click labeling of metabolically incorporated azido-monosaccharides.

Hoogenboom J, Berghuis N, Cramer D, Geurts R, Zuilhof H, Wennekes T.

BMC Plant Biol. 2016 Oct 10;16(1):220.

20.

Round robin testing of a percolation column leaching procedure.

Geurts R, Spooren J, Quaghebeur M, Broos K, Kenis C, Debaene L.

Waste Manag. 2016 Sep;55:31-7. doi: 10.1016/j.wasman.2016.06.010. Epub 2016 Jun 13.

PMID:
27311350
21.

What Does It Take to Evolve A Nitrogen-Fixing Endosymbiosis?

Geurts R, Xiao TT, Reinhold-Hurek B.

Trends Plant Sci. 2016 Mar;21(3):199-208. doi: 10.1016/j.tplants.2016.01.012. Epub 2016 Feb 2. Review.

PMID:
26850795
22.

Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement.

De Vega JJ, Ayling S, Hegarty M, Kudrna D, Goicoechea JL, Ergon Å, Rognli OA, Jones C, Swain M, Geurts R, Lang C, Mayer KF, Rössner S, Yates S, Webb KJ, Donnison IS, Oldroyd GE, Wing RA, Caccamo M, Powell W, Abberton MT, Skøt L.

Sci Rep. 2015 Nov 30;5:17394. doi: 10.1038/srep17394.

23.

The strigolactone biosynthesis gene DWARF27 is co-opted in rhizobium symbiosis.

van Zeijl A, Liu W, Xiao TT, Kohlen W, Yang WC, Bisseling T, Geurts R.

BMC Plant Biol. 2015 Oct 26;15:260. doi: 10.1186/s12870-015-0651-x.

24.

Evolution of endemism on a young tropical mountain.

Merckx VS, Hendriks KP, Beentjes KK, Mennes CB, Becking LE, Peijnenburg KT, Afendy A, Arumugam N, de Boer H, Biun A, Buang MM, Chen PP, Chung AY, Dow R, Feijen FA, Feijen H, Feijen-van Soest C, Geml J, Geurts R, Gravendeel B, Hovenkamp P, Imbun P, Ipor I, Janssens SB, Jocqué M, Kappes H, Khoo E, Koomen P, Lens F, Majapun RJ, Morgado LN, Neupane S, Nieser N, Pereira JT, Rahman H, Sabran S, Sawang A, Schwallier RM, Shim PS, Smit H, Sol N, Spait M, Stech M, Stokvis F, Sugau JB, Suleiman M, Sumail S, Thomas DC, van Tol J, Tuh FY, Yahya BE, Nais J, Repin R, Lakim M, Schilthuizen M.

Nature. 2015 Aug 20;524(7565):347-50. doi: 10.1038/nature14949. Epub 2015 Aug 12.

PMID:
26266979
25.

Lipochitooligosaccharides modulate plant host immunity to enable endosymbioses.

Limpens E, van Zeijl A, Geurts R.

Annu Rev Phytopathol. 2015;53:311-34. doi: 10.1146/annurev-phyto-080614-120149. Epub 2015 May 27. Review.

PMID:
26047562
26.

Bacterial-induced calcium oscillations are common to nitrogen-fixing associations of nodulating legumes and nonlegumes.

Granqvist E, Sun J, Op den Camp R, Pujic P, Hill L, Normand P, Morris RJ, Downie JA, Geurts R, Oldroyd GE.

New Phytol. 2015 Aug;207(3):551-8. doi: 10.1111/nph.13464. Epub 2015 May 26.

27.

Rhizobium Lipo-chitooligosaccharide Signaling Triggers Accumulation of Cytokinins in Medicago truncatula Roots.

van Zeijl A, Op den Camp RH, Deinum EE, Charnikhova T, Franssen H, Op den Camp HJ, Bouwmeester H, Kohlen W, Bisseling T, Geurts R.

Mol Plant. 2015 Aug;8(8):1213-26. doi: 10.1016/j.molp.2015.03.010. Epub 2015 Mar 21.

28.

Parasponia: a novel system for studying mutualism stability.

Behm JE, Geurts R, Kiers ET.

Trends Plant Sci. 2014 Dec;19(12):757-63. doi: 10.1016/j.tplants.2014.08.007. Epub 2014 Sep 16. Review.

PMID:
25239777
29.

Plant-driven genome selection of arbuscular mycorrhizal fungi.

Limpens E, Geurts R.

Mol Plant Pathol. 2014 Aug;15(6):531-4. doi: 10.1111/mpp.12149. Review. No abstract available.

30.

Correlative tomography.

Burnett TL, McDonald SA, Gholinia A, Geurts R, Janus M, Slater T, Haigh SJ, Ornek C, Almuaili F, Engelberg DL, Thompson GE, Withers PJ.

Sci Rep. 2014 Apr 16;4:4711. doi: 10.1038/srep04711.

31.

Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus.

Lin K, Limpens E, Zhang Z, Ivanov S, Saunders DG, Mu D, Pang E, Cao H, Cha H, Lin T, Zhou Q, Shang Y, Li Y, Sharma T, van Velzen R, de Ruijter N, Aanen DK, Win J, Kamoun S, Bisseling T, Geurts R, Huang S.

PLoS Genet. 2014 Jan;10(1):e1004078. doi: 10.1371/journal.pgen.1004078. Epub 2014 Jan 9.

32.

Evolution of a symbiotic receptor through gene duplications in the legume-rhizobium mutualism.

De Mita S, Streng A, Bisseling T, Geurts R.

New Phytol. 2014 Feb;201(3):961-72. doi: 10.1111/nph.12549. Epub 2013 Oct 28.

33.

Fluorescent In Situ Hybridization (FISH) on pachytene chromosomes as a tool for genome characterization.

Geurts R, de Jong H.

Methods Mol Biol. 2013;1069:15-24. doi: 10.1007/978-1-62703-613-9_2.

PMID:
23996305
34.

Interaction of Medicago truncatula lysin motif receptor-like kinases, NFP and LYK3, produced in Nicotiana benthamiana induces defence-like responses.

Pietraszewska-Bogiel A, Lefebvre B, Koini MA, Klaus-Heisen D, Takken FL, Geurts R, Cullimore JV, Gadella TW.

PLoS One. 2013 Jun 4;8(6):e65055. doi: 10.1371/journal.pone.0065055. Print 2013.

35.

Evaluating focused ion beam induced damage in soft materials.

Bailey RJ, Geurts R, Stokes DJ, de Jong F, Barber AH.

Micron. 2013 Jul;50:51-6. doi: 10.1016/j.micron.2013.04.005. Epub 2013 May 10.

PMID:
23726471
36.

Mycorrhizal symbiosis: ancient signalling mechanisms co-opted.

Geurts R, Vleeshouwers VG.

Curr Biol. 2012 Dec 4;22(23):R997-9. doi: 10.1016/j.cub.2012.10.021.

37.

One-step Agrobacterium mediated transformation of eight genes essential for rhizobium symbiotic signaling using the novel binary vector system pHUGE.

Untergasser A, Bijl GJ, Liu W, Bisseling T, Schaart JG, Geurts R.

PLoS One. 2012;7(10):e47885. doi: 10.1371/journal.pone.0047885. Epub 2012 Oct 24.

38.

Nonlegume Parasponia andersonii deploys a broad rhizobium host range strategy resulting in largely variable symbiotic effectiveness.

Op den Camp RH, Polone E, Fedorova E, Roelofsen W, Squartini A, Op den Camp HJ, Bisseling T, Geurts R.

Mol Plant Microbe Interact. 2012 Jul;25(7):954-63. doi: 10.1094/MPMI-11-11-0304.

39.

Modeling a cortical auxin maximum for nodulation: different signatures of potential strategies.

Deinum EE, Geurts R, Bisseling T, Mulder BM.

Front Plant Sci. 2012 May 28;3:96. doi: 10.3389/fpls.2012.00096. eCollection 2012.

40.

Exploiting an ancient signalling machinery to enjoy a nitrogen fixing symbiosis.

Geurts R, Lillo A, Bisseling T.

Curr Opin Plant Biol. 2012 Aug;15(4):438-43. doi: 10.1016/j.pbi.2012.04.004. Epub 2012 May 26. Review.

PMID:
22633856
41.

The Medicago genome provides insight into the evolution of rhizobial symbioses.

Young ND, Debellé F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, Cheung F, De Mita S, Krishnakumar V, Gundlach H, Zhou S, Mudge J, Bharti AK, Murray JD, Naoumkina MA, Rosen B, Silverstein KA, Tang H, Rombauts S, Zhao PX, Zhou P, Barbe V, Bardou P, Bechner M, Bellec A, Berger A, Bergès H, Bidwell S, Bisseling T, Choisne N, Couloux A, Denny R, Deshpande S, Dai X, Doyle JJ, Dudez AM, Farmer AD, Fouteau S, Franken C, Gibelin C, Gish J, Goldstein S, González AJ, Green PJ, Hallab A, Hartog M, Hua A, Humphray SJ, Jeong DH, Jing Y, Jöcker A, Kenton SM, Kim DJ, Klee K, Lai H, Lang C, Lin S, Macmil SL, Magdelenat G, Matthews L, McCorrison J, Monaghan EL, Mun JH, Najar FZ, Nicholson C, Noirot C, O'Bleness M, Paule CR, Poulain J, Prion F, Qin B, Qu C, Retzel EF, Riddle C, Sallet E, Samain S, Samson N, Sanders I, Saurat O, Scarpelli C, Schiex T, Segurens B, Severin AJ, Sherrier DJ, Shi R, Sims S, Singer SR, Sinharoy S, Sterck L, Viollet A, Wang BB, Wang K, Wang M, Wang X, Warfsmann J, Weissenbach J, White DD, White JD, Wiley GB, Wincker P, Xing Y, Yang L, Yao Z, Ying F, Zhai J, Zhou L, Zuber A, Dénarié J, Dixon RA, May GD, Schwartz DC, Rogers J, Quétier F, Town CD, Roe BA.

Nature. 2011 Nov 16;480(7378):520-4. doi: 10.1038/nature10625.

42.

Strigolactone biosynthesis in Medicago truncatula and rice requires the symbiotic GRAS-type transcription factors NSP1 and NSP2.

Liu W, Kohlen W, Lillo A, Op den Camp R, Ivanov S, Hartog M, Limpens E, Jamil M, Smaczniak C, Kaufmann K, Yang WC, Hooiveld GJ, Charnikhova T, Bouwmeester HJ, Bisseling T, Geurts R.

Plant Cell. 2011 Oct;23(10):3853-65. doi: 10.1105/tpc.111.089771. Epub 2011 Oct 28.

43.

A phylogenetic strategy based on a legume-specific whole genome duplication yields symbiotic cytokinin type-A response regulators.

Op den Camp RH, De Mita S, Lillo A, Cao Q, Limpens E, Bisseling T, Geurts R.

Plant Physiol. 2011 Dec;157(4):2013-22. doi: 10.1104/pp.111.187526. Epub 2011 Oct 27.

44.

Evolutionary origin of rhizobium Nod factor signaling.

Streng A, op den Camp R, Bisseling T, Geurts R.

Plant Signal Behav. 2011 Oct;6(10):1510-4. doi: 10.4161/psb.6.10.17444. Epub 2011 Oct 1. Review.

45.

Genetic dissection of Rhizobium-induced infection and nodule organogenesis in pea based on ENOD12A and ENOD5 expression analysis.

Dolgikh EA, Leppyanen IV, Osipova MA, Savelyeva NV, Borisov AY, Tsyganov VE, Geurts R, Tikhonovich IA.

Plant Biol (Stuttg). 2011 Mar;13(2):285-96. doi: 10.1111/j.1438-8677.2010.00372.x. Epub 2010 Aug 17.

PMID:
21309975
46.

LysM-type mycorrhizal receptor recruited for rhizobium symbiosis in nonlegume Parasponia.

Op den Camp R, Streng A, De Mita S, Cao Q, Polone E, Liu W, Ammiraju JS, Kudrna D, Wing R, Untergasser A, Bisseling T, Geurts R.

Science. 2011 Feb 18;331(6019):909-12. doi: 10.1126/science.1198181. Epub 2010 Dec 23.

47.

RDML: structured language and reporting guidelines for real-time quantitative PCR data.

Lefever S, Hellemans J, Pattyn F, Przybylski DR, Taylor C, Geurts R, Untergasser A, Vandesompele J; RDML consortium.

Nucleic Acids Res. 2009 Apr;37(7):2065-9. doi: 10.1093/nar/gkp056. Epub 2009 Feb 17.

48.

Medicago LYK3, an entry receptor in rhizobial nodulation factor signaling.

Smit P, Limpens E, Geurts R, Fedorova E, Dolgikh E, Gough C, Bisseling T.

Plant Physiol. 2007 Sep;145(1):183-91. Epub 2007 Jun 22.

49.

Primer3Plus, an enhanced web interface to Primer3.

Untergasser A, Nijveen H, Rao X, Bisseling T, Geurts R, Leunissen JA.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W71-4. Epub 2007 May 7.

50.

High-quality sample preparation by low kV FIB thinning for analytical TEM measurements.

Bals S, Tirry W, Geurts R, Yang Z, Schryvers D.

Microsc Microanal. 2007 Apr;13(2):80-6.

PMID:
17367547

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