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Items: 1 to 50 of 80

1.

Stable native RIP9 complexes associate with C-to-U RNA editing activity, PPRs, RIPs, OZ1, ORRM1 and ISE2.

Sandoval R, Boyd RD, Kiszter AN, Mirzakhanyan Y, Santibańez P, Gershon PD, Hayes ML.

Plant J. 2019 Sep;99(6):1116-1126. doi: 10.1111/tpj.14384. Epub 2019 Jun 26.

PMID:
31077462
2.

Exploitation of nuclear functions by human rhinovirus, a cytoplasmic RNA virus.

Flather D, Nguyen JHC, Semler BL, Gershon PD.

PLoS Pathog. 2018 Aug 24;14(8):e1007277. doi: 10.1371/journal.ppat.1007277. eCollection 2018 Aug.

3.

Multisubunit DNA-Dependent RNA Polymerases from Vaccinia Virus and Other Nucleocytoplasmic Large-DNA Viruses: Impressions from the Age of Structure.

Mirzakhanyan Y, Gershon PD.

Microbiol Mol Biol Rev. 2017 Jul 12;81(3). pii: e00010-17. doi: 10.1128/MMBR.00010-17. Print 2017 Sep. Review.

4.

Recapitulating the human tumor microenvironment: Colon tumor-derived extracellular matrix promotes angiogenesis and tumor cell growth.

Romero-López M, Trinh AL, Sobrino A, Hatch MM, Keating MT, Fimbres C, Lewis DE, Gershon PD, Botvinick EL, Digman M, Lowengrub JS, Hughes CC.

Biomaterials. 2017 Feb;116:118-129. doi: 10.1016/j.biomaterials.2016.11.034. Epub 2016 Nov 24.

5.

Migration of breast cancer cell lines in response to pulmonary laminin 332.

Carpenter PM, Sivadas P, Hua SS, Xiao C, Gutierrez AB, Ngo T, Gershon PD.

Cancer Med. 2017 Jan;6(1):220-234. doi: 10.1002/cam4.957. Epub 2016 Nov 22.

6.

Protein Primary Structure of the Vaccinia Virion at Increased Resolution

Ngo T, Mirzakhanyan Y, Moussatche N, Gershon PD.

J Virol. 2016 Oct 14;90(21):9905-9919. doi: 10.1128/JVI.01042-16. Print 2016 Nov 1.

7.

Three-Dimensional Adult Cardiac Extracellular Matrix Promotes Maturation of Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes.

Fong AH, Romero-López M, Heylman CM, Keating M, Tran D, Sobrino A, Tran AQ, Pham HH, Fimbres C, Gershon PD, Botvinick EL, George SC, Hughes CC.

Tissue Eng Part A. 2016 Aug;22(15-16):1016-25. doi: 10.1089/ten.TEA.2016.0027.

8.

Generation of Recombinant Polioviruses Harboring RNA Affinity Tags in the 5' and 3' Noncoding Regions of Genomic RNAs.

Flather D, Cathcart AL, Cruz C, Baggs E, Ngo T, Gershon PD, Semler BL.

Viruses. 2016 Feb 4;8(2). pii: E39. doi: 10.3390/v8020039.

9.

Single nucleoprotein residue modulates arenavirus replication complex formation.

Knopp KA, Ngo T, Gershon PD, Buchmeier MJ.

MBio. 2015 Apr 28;6(3):e00524-15. doi: 10.1128/mBio.00524-15.

10.

Integrated proteomic and transcriptomic analysis of the Aedes aegypti eggshell.

Marinotti O, Ngo T, Kojin BB, Chou SP, Nguyen B, Juhn J, Carballar-Lejarazú R, Marinotti PN, Jiang X, Walter MF, Tu Z, Gershon PD, James AA.

BMC Dev Biol. 2014 Apr 5;14:15. doi: 10.1186/1471-213X-14-15.

11.

Static and dynamic protein phosphorylation in the Vaccinia virion.

Matson J, Chou W, Ngo T, Gershon PD.

Virology. 2014 Mar;452-453:310-23. doi: 10.1016/j.virol.2014.01.012. Epub 2014 Feb 25.

12.

Cleaved and missed sites for trypsin, lys-C, and lys-N can be predicted with high confidence on the basis of sequence context.

Gershon PD.

J Proteome Res. 2014 Feb 7;13(2):702-9. doi: 10.1021/pr400802z. Epub 2013 Dec 24.

PMID:
24328144
13.

Domain-level rocking motion within a polymerase that translocates on single-stranded nucleic acid.

Li H, Li C, Zhou S, Poulos TL, Gershon PD.

Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):617-24. doi: 10.1107/S0907444913000346. Epub 2013 Mar 14.

14.

Analysis of stromal cell secretomes reveals a critical role for stromal cell-derived hepatocyte growth factor and fibronectin in angiogenesis.

Newman AC, Chou W, Welch-Reardon KM, Fong AH, Popson SA, Phan DT, Sandoval DR, Nguyen DP, Gershon PD, Hughes CC.

Arterioscler Thromb Vasc Biol. 2013 Mar;33(3):513-22. doi: 10.1161/ATVBAHA.112.300782. Epub 2013 Jan 3.

15.

Picornavirus modification of a host mRNA decay protein.

Rozovics JM, Chase AJ, Cathcart AL, Chou W, Gershon PD, Palusa S, Wilusz J, Semler BL.

MBio. 2012 Nov 6;3(6):e00431-12. doi: 10.1128/mBio.00431-12.

16.

An RNA virus hijacks an incognito function of a DNA repair enzyme.

Virgen-Slane R, Rozovics JM, Fitzgerald KD, Ngo T, Chou W, van der Heden van Noort GJ, Filippov DV, Gershon PD, Semler BL.

Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14634-9. doi: 10.1073/pnas.1208096109. Epub 2012 Aug 20.

17.

An overview of the vaccinia virus infectome: a survey of the proteins of the poxvirus-infected cell.

Chou W, Ngo T, Gershon PD.

J Virol. 2012 Feb;86(3):1487-99. doi: 10.1128/JVI.06084-11. Epub 2011 Nov 16. Review.

18.

The requirement for fibroblasts in angiogenesis: fibroblast-derived matrix proteins are essential for endothelial cell lumen formation.

Newman AC, Nakatsu MN, Chou W, Gershon PD, Hughes CC.

Mol Biol Cell. 2011 Oct;22(20):3791-800. doi: 10.1091/mbc.E11-05-0393. Epub 2011 Aug 24.

20.

Widespread but small-scale changes in the structural and dynamic properties of vaccinia virus poly(A) polymerase upon association with its processivity factor in solution.

Li CZ, Koter M, Ye X, Zhou SF, Chou W, Luo R, Gershon PD.

Biochemistry. 2010 Jul 27;49(29):6247-62. doi: 10.1021/bi100166x.

PMID:
20469877
21.

Proteomics reveals novel components of the Anopheles gambiae eggshell.

Amenya DA, Chou W, Li J, Yan G, Gershon PD, James AA, Marinotti O.

J Insect Physiol. 2010 Oct;56(10):1414-9. doi: 10.1016/j.jinsphys.2010.04.013. Epub 2010 May 5.

22.

Novel TUTase associates with an editosome-like complex in mitochondria of Trypanosoma brucei.

Aphasizheva I, Ringpis GE, Weng J, Gershon PD, Lathrop RH, Aphasizhev R.

RNA. 2009 Jul;15(7):1322-37. doi: 10.1261/rna.1538809. Epub 2009 May 22.

23.

Polymerase translocation with respect to single-stranded nucleic acid: looping or wrapping of primer around a poly(A) polymerase.

Li C, Li H, Zhou S, Sun E, Yoshizawa J, Poulos TL, Gershon PD.

Structure. 2009 May 13;17(5):680-9. doi: 10.1016/j.str.2009.03.012.

24.

Arginine methylation of the ICP27 RGG box regulates ICP27 export and is required for efficient herpes simplex virus 1 replication.

Souki SK, Gershon PD, Sandri-Goldin RM.

J Virol. 2009 Jun;83(11):5309-20. doi: 10.1128/JVI.00238-09. Epub 2009 Mar 25.

25.

Identification and characterization of nuclear non-canonical poly(A) polymerases from Trypanosoma brucei.

Etheridge RD, Clemens DM, Gershon PD, Aphasizhev R.

Mol Biochem Parasitol. 2009 Mar;164(1):66-73. doi: 10.1016/j.molbiopara.2008.11.004. Epub 2008 Nov 25.

27.

Atomic force microscopy investigation of vaccinia virus structure.

Kuznetsov Y, Gershon PD, McPherson A.

J Virol. 2008 Aug;82(15):7551-66. doi: 10.1128/JVI.00016-08. Epub 2008 May 28.

28.

3' adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria.

Etheridge RD, Aphasizheva I, Gershon PD, Aphasizhev R.

EMBO J. 2008 Jun 4;27(11):1596-608. doi: 10.1038/emboj.2008.87. Epub 2008 May 8.

29.

Surface-plasmon resonance spectrometry and characterization of absorbing liquids.

Kolomenskii AA, Gershon PD, Schuessler HA.

Appl Opt. 2000 Jul 1;39(19):3314-20.

PMID:
18349899
30.

Sensitivity and detection limit of concentration and adsorption measurements by laser-induced surface-plasmon resonance.

Kolomenskii AA, Gershon PD, Schuessler HA.

Appl Opt. 1997 Sep 1;36(25):6539-47.

PMID:
18259515
31.

Saltatory forward movement of a poly(A) polymerase during poly(A) tail addition.

Yoshizawa JM, Li C, Gershon PD.

J Biol Chem. 2007 Jun 29;282(26):19144-51. Epub 2007 May 8.

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35.

Studying vaccinia virus RNA processing in vitro.

Gershon PD.

Methods Mol Biol. 2004;269:151-68. Review.

PMID:
15114015
36.

Molecular flexibility and discontinuous translocation of a non-templated polymerase.

Johnson L, Liu S, Gershon PD.

J Mol Biol. 2004 Apr 2;337(4):843-56.

PMID:
15033355
37.
38.

Direct detection of protein thiol derivatization by PAGE.

Johnson L, Gershon PD.

Biotechniques. 2002 Dec;33(6):1292-5. No abstract available.

40.
41.
42.

Synthesis and application of a chain-terminating dinucleotide mRNA cap analog.

Peng ZH, Sharma V, Singleton SF, Gershon PD.

Org Lett. 2002 Jan 24;4(2):161-4.

PMID:
11796040
43.

(A)-tail of two polymerase structures.

Gershon PD.

Nat Struct Biol. 2000 Oct;7(10):819-21. No abstract available.

PMID:
11017181
44.

Structural basis of mRNA cap recognition by proteins.

Quiocho FA, Hu G, Gershon PD.

Curr Opin Struct Biol. 2000 Feb;10(1):78-86. Review.

PMID:
10679461
45.

mRNA cap recognition: dominant role of enhanced stacking interactions between methylated bases and protein aromatic side chains.

Hu G, Gershon PD, Hodel AE, Quiocho FA.

Proc Natl Acad Sci U S A. 1999 Jun 22;96(13):7149-54.

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50.

Recognition of capped RNA substrates by VP39, the vaccinia virus-encoded mRNA cap-specific 2'-O-methyltransferase.

Lockless SW, Cheng HT, Hodel AE, Quiocho FA, Gershon PD.

Biochemistry. 1998 Jun 9;37(23):8564-74.

PMID:
9622508

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