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Items: 34

1.

Immunogenicity and malaria transmission reducing potency of Pfs48/45 and Pfs25 encoded by DNA vaccines administered by intramuscular electroporation.

Datta D, Bansal GP, Gerloff DL, Ellefsen B, Hannaman D, Kumar N.

Vaccine. 2017 Jan 5;35(2):264-272. doi: 10.1016/j.vaccine.2016.11.072. Epub 2016 Nov 29.

2.

Polymerase Interactions with Wobble Mismatches in Synthetic Genetic Systems and Their Evolutionary Implications.

Winiger CB, Kim MJ, Hoshika S, Shaw RW, Moses JD, Matsuura MF, Gerloff DL, Benner SA.

Biochemistry. 2016 Jul 19;55(28):3847-50. doi: 10.1021/acs.biochem.6b00533. Epub 2016 Jul 8.

PMID:
27347689
3.

Evolution of functional six-nucleotide DNA.

Zhang L, Yang Z, Sefah K, Bradley KM, Hoshika S, Kim MJ, Kim HJ, Zhu G, Jiménez E, Cansiz S, Teng IT, Champanhac C, McLendon C, Liu C, Zhang W, Gerloff DL, Huang Z, Tan W, Benner SA.

J Am Chem Soc. 2015 Jun 3;137(21):6734-7. doi: 10.1021/jacs.5b02251. Epub 2015 May 20.

4.

Three-dimensional topology of the SMC2/SMC4 subcomplex from chicken condensin I revealed by cross-linking and molecular modelling.

Barysz H, Kim JH, Chen ZA, Hudson DF, Rappsilber J, Gerloff DL, Earnshaw WC.

Open Biol. 2015 Feb;5(2):150005. doi: 10.1098/rsob.150005.

5.

Pooled assembly of marine metagenomic datasets: enriching annotation through chimerism.

Magasin JD, Gerloff DL.

Bioinformatics. 2015 Feb 1;31(3):311-7. doi: 10.1093/bioinformatics/btu546. Epub 2014 Oct 11.

PMID:
25306399
6.

Protein domains of unknown function are essential in bacteria.

Goodacre NF, Gerloff DL, Uetz P.

MBio. 2013 Dec 31;5(1):e00744-13. doi: 10.1128/mBio.00744-13.

7.

MaGnET: Malaria Genome Exploration Tool.

Sharman JL, Gerloff DL.

Bioinformatics. 2013 Sep 15;29(18):2350-2. doi: 10.1093/bioinformatics/btt384. Epub 2013 Jul 27.

8.

BRCT domains: A little more than kin, and less than kind.

Gerloff DL, Woods NT, Farago AA, Monteiro AN.

FEBS Lett. 2012 Aug 14;586(17):2711-6. doi: 10.1016/j.febslet.2012.05.005. Epub 2012 May 11. Review.

9.

The interface of protein structure, protein biophysics, and molecular evolution.

Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, Lakner C, Lartillot N, Lovell SC, Naylor G, Perica T, Pollock DD, Pupko T, Regan L, Roger A, Rubinstein N, Shakhnovich E, Sjölander K, Sunyaev S, Teufel AI, Thorne JL, Thornton JW, Weinreich DM, Whelan S.

Protein Sci. 2012 Jun;21(6):769-85. doi: 10.1002/pro.2071. Epub 2012 Apr 23. Review.

10.

Cell contact-dependent outer membrane exchange in myxobacteria: genetic determinants and mechanism.

Pathak DT, Wei X, Bucuvalas A, Haft DH, Gerloff DL, Wall D.

PLoS Genet. 2012;8(4):e1002626. doi: 10.1371/journal.pgen.1002626. Epub 2012 Apr 12.

11.

BISC: binary subcomplexes in proteins database.

Juettemann T, Gerloff DL.

Nucleic Acids Res. 2011 Jan;39(Database issue):D705-11. doi: 10.1093/nar/gkq859. Epub 2010 Nov 16.

12.

Highly sensitive detection of individual HEAT and ARM repeats with HHpred and COACH.

Kippert F, Gerloff DL.

PLoS One. 2009 Sep 24;4(9):e7148. doi: 10.1371/journal.pone.0007148.

13.

Structural models for the protein family characterized by gamete surface protein Pfs230 of Plasmodium falciparum.

Gerloff DL, Creasey A, Maslau S, Carter R.

Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13598-603. Epub 2005 Sep 9.

14.

Large-scale modelling as a route to multiple surface comparisons of the CCP module family.

Soares DC, Gerloff DL, Syme NR, Coulson AF, Parkinson J, Barlow PN.

Protein Eng Des Sel. 2005 Aug;18(8):379-88. Epub 2005 Jun 23.

PMID:
15976010
16.

Timeless and Armadillo: a link too far (Comment on Vodovar et al. Curr. Biol. (2002) 12, R610-R611).

Kippert F, Gerloff DL.

Curr Biol. 2004 Aug 24;14(16):R650-1; author reply R652-3. No abstract available.

17.

Borealin: a novel chromosomal passenger required for stability of the bipolar mitotic spindle.

Gassmann R, Carvalho A, Henzing AJ, Ruchaud S, Hudson DF, Honda R, Nigg EA, Gerloff DL, Earnshaw WC.

J Cell Biol. 2004 Jul 19;166(2):179-91. Epub 2004 Jul 12.

18.

YETI: Yeast Exploration Tool Integrator.

Orton RJ, Sellers WI, Gerloff DL.

Bioinformatics. 2004 Jan 22;20(2):284-5.

PMID:
14734325
19.

Human INCENP colocalizes with the Aurora-B/AIRK2 kinase on chromosomes and is overexpressed in tumour cells.

Adams RR, Eckley DM, Vagnarelli P, Wheatley SP, Gerloff DL, Mackay AM, Svingen PA, Kaufmann SH, Earnshaw WC.

Chromosoma. 2001 May;110(2):65-74.

PMID:
11453556
20.

INCENP binds the Aurora-related kinase AIRK2 and is required to target it to chromosomes, the central spindle and cleavage furrow.

Adams RR, Wheatley SP, Gouldsworthy AM, Kandels-Lewis SE, Carmena M, Smythe C, Gerloff DL, Earnshaw WC.

Curr Biol. 2000 Sep 7;10(17):1075-8.

21.

Evolutionary, mechanistic, and predictive analyses of the hydroxymethyldihydropterin pyrophosphokinase family of proteins.

Gerloff DL, Cannarozzi GM, Joachimiak M, Cohen FE, Schreiber D, Benner SA.

Biochem Biophys Res Commun. 1999 Jan 8;254(1):70-6.

PMID:
9920734
22.

Structure prediction in a post-genomic environment: a secondary and tertiary structural model for the initiation factor 5A family.

Gerloff DL, Joachimiak M, Cohen FE, Cannarozzi GM, Chamberlin SG, Benner SA.

Biochem Biophys Res Commun. 1998 Oct 9;251(1):173-81.

PMID:
9790926
23.

A predicted consensus structure for the N-terminal fragment of the heat shock protein HSP90 family.

Gerloff DL, Cohen FE, Korostensky C, Turcotte M, Gonnet GH, Benner SA.

Proteins. 1997 Mar;27(3):450-8.

PMID:
9094746
24.

A predicted consensus structure for the C terminus of the beta and gamma chains of fibrinogen.

Gerloff DL, Cohen FE, Benner SA.

Proteins. 1997 Feb;27(2):279-89.

PMID:
9061791
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Predicted secondary and supersecondary structure for the serine-threonine-specific protein phosphatase family.

Jenny TF, Gerloff DL, Cohen MA, Benner SA.

Proteins. 1995 Jan;21(1):1-10.

PMID:
7716164
30.

Predicting protein crystal structures.

Benner SA, Gerloff DL, Jenny TF.

Science. 1994 Sep 16;265(5179):1642-4. No abstract available.

PMID:
8085149
32.

A secondary structure prediction of the hemorrhagic metalloprotease family.

Gerloff DL, Jenny TF, Knecht LJ, Benner SA.

Biochem Biophys Res Commun. 1993 Jul 15;194(1):560-5.

PMID:
8333870
33.

Predicting the conformation of proteins. Man versus machine.

Benner SA, Gerloff DL.

FEBS Lett. 1993 Jun 28;325(1-2):29-33. Review.

34.

The nitrogenase MoFe protein. A secondary structure prediction.

Gerloff DL, Jenny TF, Knecht LJ, Gonnet GH, Benner SA.

FEBS Lett. 1993 Mar 1;318(2):118-24.

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